* installing *source* package 'sequoia' ... ** this is package 'sequoia' version '3.1.3' ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 14.3.0' using Fortran compiler: 'GNU Fortran (GCC) 14.3.0' gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c MkRelA.f90 -o MkRelA.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c Sequoia.f90 -o Sequoia.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c SimGenoErrors.f90 -o SimGenoErrors.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c countpairOH.f90 -o countpairOH.o countpairOH.f90:2:2: 2 | implicit none | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:4:2: 4 | integer, intent(IN) :: ng, nm, np, maxoh | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:5:2: 5 | integer, intent(IN) :: pairids(2*np), genofr(ng*nm) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:6:2: 6 | integer, intent(INOUT) :: ohrf(np) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:7:2: 7 | integer :: i,j, l,x, pairs(np, 2), Genos(nm, ng), IsOppHom(-1:2,-1:2) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:9:2: 9 | pairs(:,1) = pairids(1:np) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:10:2: 10 | pairs(:,2) = pairids((np+1):(2*np)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:13:2: 13 | Genos = -1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:14:2: 14 | j = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:15:2: 15 | do l=1,nm | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:16:2: 16 | do i=1, ng | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:17:2: 17 | j = j+1 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:18:2: 18 | if (GenoFR(j)>=0) then | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:19:2: 19 | Genos(l,i) = GenoFR(j) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:20:2: 20 | endif | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:21:2: 21 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:22:2: 22 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:25:2: 25 | IsOppHom = 0 | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:30:2: 30 | do x=1, np | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:32:2: 32 | ohrf(x) = calcOH(pairs(x,1), pairs(x,2)) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:33:2: 33 | enddo | 1 Warning: Nonconforming tab character at (1) [-Wtabs] countpairOH.f90:37:2: 37 | integer function calcOH(i,j) result(OH_ij) | 1 Warning: Nonconforming tab character at (1) [-Wtabs] gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c ester.f90 -o ester.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -c pretty_R_print.c -o pretty_R_print.o gcc -shared -s -static-libgcc -o sequoia.dll sequoia-win.def MkRelA.o Sequoia.o SimGenoErrors.o countpairOH.o ester.o init.o pretty_R_print.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -lgfortran -lquadmath -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-sequoia/00new/sequoia/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sequoia)