* installing *source* package ‘sequoia’ ... ** using staged installation ** libs using C compiler: ‘Debian clang version 17.0.5 (1)’ using Fortran compiler: ‘Debian flang-new version 17.0.5 (1)’ flang-new-17 -fpic -g -O2 -Wall -c MkRelA.f90 -o MkRelA.o flang-new: warning: argument unused during compilation: '-Wall' flang-new-17 -fpic -g -O2 -Wall -c Sequoia.f90 -o Sequoia.o flang-new: warning: argument unused during compilation: '-Wall' ./Sequoia.f90:207:3: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object attributes call intpr(trim(message), nchar, IntDummy, 0) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./Sequoia.f90:205:3: previous reference to 'intpr' call intpr(trim(message), nchar, IntData, ndata) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./Sequoia.f90:301:1: warning: Reference to the procedure 'intpr' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object attributes call intpr("", 0, (/0/), 0) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./Sequoia.f90:205:3: previous reference to 'intpr' call intpr(trim(message), nchar, IntData, ndata) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./Sequoia.f90:1545:9: warning: Reference to the procedure 'rwarn' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=26_8) vs CHARACTER(KIND=1,LEN=38_8) call rwarn("individual assigned as both dam & sire") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./Sequoia.f90:875:19: previous reference to 'rwarn' if(quiet<1) call rwarn("reached max for duplicates") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-17 -fpic -g -O2 -Wall -c SimGenoErrors.f90 -o SimGenoErrors.o flang-new: warning: argument unused during compilation: '-Wall' flang-new-17 -fpic -g -O2 -Wall -c ester.f90 -o ester.o flang-new: warning: argument unused during compilation: '-Wall' ./ester.f90:382:11: warning: Reference to the procedure 'rexit' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=49_8) vs CHARACTER(KIND=1,LEN=50_8) call rexit(" ERROR! *** Individual is both dam and sire! *** ") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ester.f90:343:7: previous reference to 'rexit' call rexit(" ERROR! *** parprob typ not yet implemented *** ") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ester.f90:390:11: warning: Reference to the procedure 'rexit' has an implicit interface that is distinct from another reference: incompatible dummy argument #1: incompatible dummy data object types: CHARACTER(KIND=1,LEN=49_8) vs CHARACTER(KIND=1,LEN=80_8) call rexit(" ERROR! *** reached maximum number of offspring, please increase 'maxnOff' *** ") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./ester.f90:343:7: previous reference to 'rexit' call rexit(" ERROR! *** parprob typ not yet implemented *** ") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sequoia.so MkRelA.o Sequoia.o SimGenoErrors.o ester.o init.o -L/usr/lib/llvm-17/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR installing to /srv/hornik/tmp/CRAN/sequoia.Rcheck/00LOCK-sequoia/00new/sequoia/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sequoia)