* using log directory ‘/srv/hornik/tmp/CRAN_pretest/seismicai.Rcheck’ * using R Under development (unstable) (2026-03-11 r89605) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 21.1.8 (3+b1) Debian flang version 21.1.8 (3+b1) * running under: Debian GNU/Linux forky/sid * using session charset: UTF-8 * current time: 2026-03-12 09:18:12 UTC * checking for file ‘seismicai/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘seismicai’ version ‘0.1.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [2s/2s] NOTE Maintainer: ‘Rezzy Eko Caraka ’ New submission Possibly misspelled words in DESCRIPTION: Agentic (3:8) LLM (17:82) USGS (16:49) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘seismicai’ can be installed ... [10s/10s] WARNING Found the following significant warnings: Warning: replacing previous import ‘caret::progress’ by ‘httr::progress’ when loading ‘seismicai’ Warning: replacing previous import ‘shiny::validate’ by ‘jsonlite::validate’ when loading ‘seismicai’ Warning: replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘seismicai’ Warning: replacing previous import ‘shiny::dataTableOutput’ by ‘DT::dataTableOutput’ when loading ‘seismicai’ Warning: replacing previous import ‘ggplot2::margin’ by ‘randomForest::margin’ when loading ‘seismicai’ Warning: replacing previous import ‘dplyr::combine’ by ‘randomForest::combine’ when loading ‘seismicai’ Warning: replacing previous import ‘ggplot2::element’ by ‘e1071::element’ when loading ‘seismicai’ See ‘/srv/hornik/tmp/CRAN_pretest/seismicai.Rcheck/00install.out’ for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard files/directories found at top level: ‘LICENSE.txt’ ‘SUBMISSION_GUIDE.md’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... WARNING Found the following file with non-ASCII characters: R/app.R Portable packages must use only ASCII characters in their R code and NAMESPACE directives, except perhaps in comments. Use \uxxxx escapes for other characters. Function ‘tools::showNonASCIIfile’ can help in finding non-ASCII characters in files. * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s/3s] OK * checking whether the package can be loaded with stated dependencies ... [3s/3s] OK * checking whether the package can be unloaded cleanly ... [3s/3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK * checking whether the namespace can be unloaded cleanly ... [3s/3s] OK * checking loading without being on the library search path ... [3s/3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [14s/14s] NOTE process_seismic_data: no visible global function definition for ‘na.omit’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘time’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘time_parsed’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘date_col’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘week_col’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘latitude’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘longitude’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘depth’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘mag’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘hour_col’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘rms’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘gap’ run_seismic_app : server : process_seismic_data: no visible global function definition for ‘na.omit’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘country.etc’ run_seismic_app : server : process_seismic_data: no visible binding for global variable ‘pop’ run_seismic_app : server: no visible global function definition for ‘read.csv’ run_seismic_app : server : : no visible global function definition for ‘write.csv’ run_seismic_app : server: no visible binding for global variable ‘country.etc’ run_seismic_app : server: no visible binding for global variable ‘pop’ run_seismic_app : server: no visible binding for global variable ‘long’ run_seismic_app : server: no visible binding for global variable ‘lat’ run_seismic_app : server: no visible binding for global variable ‘group’ run_seismic_app : server: no visible binding for global variable ‘name’ run_seismic_app : server: no visible binding for global variable ‘longitude’ run_seismic_app : server: no visible binding for global variable ‘latitude’ run_seismic_app : server: no visible binding for global variable ‘LISA_Quad’ run_seismic_app : server: no visible binding for global variable ‘date_col’ run_seismic_app : server: no visible binding for global variable ‘eq_count’ run_seismic_app : server: no visible global function definition for ‘stl’ run_seismic_app : server: no visible global function definition for ‘ts’ run_seismic_app : server: no visible binding for global variable ‘mag’ run_seismic_app : server: no visible binding for global variable ‘mag_bin’ run_seismic_app : server: no visible binding for global variable ‘log_cum’ run_seismic_app : server: no visible binding for global variable ‘depth’ run_seismic_app : server: no visible global function definition for ‘binomial’ run_seismic_app : server: no visible global function definition for ‘model.matrix’ run_seismic_app : server: no visible global function definition for ‘pnorm’ run_seismic_app : server: no visible global function definition for ‘predict’ run_seismic_app : server: no visible global function definition for ‘par’ run_seismic_app : server: no visible global function definition for ‘reorder’ run_seismic_app : server: no visible binding for global variable ‘Feature’ run_seismic_app : server: no visible binding for global variable ‘Importance’ run_seismic_app : server: no visible binding for global variable ‘Pred’ run_seismic_app : server: no visible binding for global variable ‘hour_col’ run_seismic_app : server: no visible binding for global variable ‘Nightlight_Index’ run_seismic_app : server: no visible binding for global variable ‘Risk_Class’ run_seismic_app : server: no visible binding for global variable ‘level’ run_seismic_app : server: no visible binding for global variable ‘E’ run_seismic_app : server: no visible binding for global variable ‘CumE’ run_seismic_app : server: no visible binding for global variable ‘gap’ run_seismic_app : server: no visible binding for global variable ‘rms’ run_seismic_app : server: no visible global function definition for ‘kmeans’ run_seismic_app : server: no visible binding for global variable ‘Cluster’ run_seismic_app : server: no visible global function definition for ‘text’ run_seismic_app : server: no visible global function definition for ‘plot.new’ run_seismic_app : server: no visible global function definition for ‘title’ run_seismic_app : server: no visible binding for global variable ‘Index’ run_seismic_app : server: no visible binding for global variable ‘Entropy’ run_seismic_app : server: no visible binding for global variable ‘Predicted_Class’ run_seismic_app : server: no visible binding for global variable ‘lon’ Undefined global functions or variables: Cluster CumE E Entropy Feature Importance Index LISA_Quad Nightlight_Index Pred Predicted_Class Risk_Class binomial country.etc date_col depth eq_count gap group hour_col kmeans lat latitude level log_cum lon long longitude mag mag_bin model.matrix na.omit name par plot.new pnorm pop predict read.csv reorder rms stl text time time_parsed title ts week_col write.csv Consider adding importFrom("graphics", "par", "plot.new", "text", "title") importFrom("stats", "binomial", "kmeans", "model.matrix", "na.omit", "pnorm", "predict", "reorder", "stl", "time", "ts") importFrom("utils", "read.csv", "write.csv") to your NAMESPACE file. * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING Undocumented code objects: ‘fetch_usgs_data’ ‘train_ml_model’ All user-level objects in a package should have documentation entries. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [3s/3s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [3s/3s] OK Running ‘testthat.R’ [3s/3s] * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 3 WARNINGs, 3 NOTEs