* using log directory ‘/srv/hornik/tmp/CRAN_pretest/see.Rcheck’
* using R Under development (unstable) (2024-08-30 r87081)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘see/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘see’ version ‘0.9.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/8s] NOTE
Maintainer: ‘Indrajeet Patil <patilindrajeet.science@gmail.com>’

Unknown, possibly misspelled, fields in DESCRIPTION:
  ‘Remotes’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘see’ can be installed ... [5s/5s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s/11s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [11s/11s] ERROR
Running examples in ‘see-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot.see_check_dag
> ### Title: Plot method for check DAGs
> ### Aliases: plot.see_check_dag
> 
> ### ** Examples
> 
> ## Don't show: 
> if (require("ggdag", quietly = TRUE)) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf
+ ## End(Don't show)
+ library(performance)
+ # incorrect adjustment
+ dag <- check_dag(
+   y ~ x + b + c,
+   x ~ b,
+   outcome = "y",
+   exposure = "x"
+ )
+ dag
+ plot(dag)
+ 
+ # plot only model with required adjustments
+ plot(dag, which = "required")
+ 
+ # collider-bias?
+ dag <- check_dag(
+   y ~ x + c + d,
+   x ~ c + d,
+   b ~ x,
+   b ~ y,
+   outcome = "y",
+   exposure = "x",
+   adjusted = "c"
+ )
+ plot(dag)
+ 
+ # longer labels, automatic detection of outcome and exposure
+ dag <- check_dag(
+   QoL ~ age + education + gender,
+   age ~ education
+ )
+ plot(dag)
+ ## Don't show: 
+ }) # examplesIf

Attaching package: ‘ggdag’

The following object is masked from ‘package:stats’:

    filter

> library(performance)
> dag <- check_dag(y ~ x + b + c, x ~ b, outcome = "y", exposure = "x")
Error in check_dag(y ~ x + b + c, x ~ b, outcome = "y", exposure = "x") : 
  could not find function "check_dag"
Calls: <Anonymous> -> source -> withVisible -> eval -> eval
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [23s/11s] ERROR
  Running ‘testthat.R’ [23s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # graphics engine changed in R 4.3, and so snapshots generated on
  > # previous R version won't work with later R releases
  > if (require("testthat", quietly = TRUE) && require("vdiffr", quietly = TRUE) && getRversion() >= "4.4.0") {
  +   library(testthat)
  +   library(see)
  + 
  +   test_check("see")
  + }
  Starting 2 test processes
  [ FAIL 3 | WARN 0 | SKIP 12 | PASS 33 ]
  
  ══ Skipped tests (12) ══════════════════════════════════════════════════════════
  • On CRAN (12): 'test-check_model.R:2:3', 'test-plot.check_normality.R:18:3',
    'test-plot.effectsize_table.R:5:3', 'test-plot.compare_parameters.R:20:3',
    'test-plot.n_factors.R:7:3', 'test-plot.performance_roc.R:14:3',
    'test-plot.performance_pp_check.R:6:3', 'test-scale_color_colorhex_c.R:3:3',
    'test-vdiffr_bayestestr_plots.R:11:3', 'test-vdiffr_geoms_coords.R:13:3',
    'test-vdiffr_scale_color.R:2:3', 'test-vdiffr_themes.R:11:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-plot.check_dag.R:7:3'): `plot()` for check_dag ─────────────────
  Error: 'check_dag' is not an exported object from 'namespace:performance'
  ── Error ('test-plot.check_dag.R:58:3'): `plot()` for check_dag, multiple adjustment sets ──
  Error: 'check_dag' is not an exported object from 'namespace:performance'
  ── Error ('test-plot.check_dag.R:77:3'): `plot()` for check_dag, different total and direct adjustments ──
  Error: 'check_dag' is not an exported object from 'namespace:performance'
  
  [ FAIL 3 | WARN 0 | SKIP 12 | PASS 33 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [4s/4s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 ERRORs, 1 NOTE