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Type 'q()' to quit R. > options(Matrix.warnDeprecatedCoerce = 2) > > library(testthat) > library(sdmTMB) > > test_check("sdmTMB") Starting 2 test processes [ FAIL 0 | WARN 0 | SKIP 159 | PASS 191 ] ══ Skipped tests (159) ═════════════════════════════════════════════════════════ • On CRAN (159): 'test-1-visreg.R:2:3', 'test-1-visreg.R:189:3', 'test-2-fit-less-basic.R:2:3', 'test-2-fit-less-basic.R:32:3', 'test-2-fit-less-basic.R:84:3', 'test-2-fit-less-basic.R:100:3', 'test-2-fit-less-basic.R:171:3', 'test-2-fit-less-basic.R:189:3', 'test-2-fit-less-basic.R:239:3', 'test-2-fit-less-basic.R:247:3', 'test-2-fit-less-basic.R:276:3', 'test-2-fit-less-basic.R:294:3', 'test-2-fit-less-basic.R:317:3', 'test-2-fit-less-basic.R:361:3', 'test-2-fit-less-basic.R:372:3', 'test-2-fit-less-basic.R:426:3', 'test-2-fit-less-basic.R:501:3', 'test-2-print-anisotropy.R:2:3', 'test-3-families.R:39:3', 'test-3-families.R:59:3', 'test-3-families.R:78:3', 'test-3-families.R:93:3', 'test-3-families.R:128:3', 'test-3-families.R:142:3', 'test-3-families.R:155:3', 'test-3-families.R:172:3', 'test-3-families.R:195:3', 'test-3-families.R:427:3', 'test-3-families.R:471:3', 'test-3-spatial-varying.R:2:3', 'test-3-spatial-varying.R:94:3', 'test-3-spatial-varying.R:119:3', 'test-3-spatial-varying.R:139:3', 'test-4-index-calculation.R:3:3', 'test-4-index-calculation.R:58:3', 'test-5-residuals.R:20:3', 'test-5-residuals.R:217:3', 'test-5-residuals.R:318:3', 'test-5-residuals.R:331:3', 'test-5-residuals.R:371:3', 'test-5-residuals.R:390:3', 'test-6-tmb-simulation.R:2:3', 'test-6-tmb-simulation.R:34:3', 'test-6-tmb-simulation.R:69:3', 'test-6-tmb-simulation.R:121:3', 'test-6-tmb-simulation.R:163:3', 'test-8-delta2.R:2:3', 'test-8-delta2.R:77:3', 'test-8-delta2.R:146:3', 'test-8-delta2.R:252:3', 'test-8-delta2.R:345:3', 'test-8-delta2.R:424:3', 'test-8-delta2.R:473:3', 'test-9-mvn-simulation.R:2:3', 'test-9-mvn-simulation.R:26:3', 'test-9-mvn-simulation.R:51:3', 'test-9-mvn-simulation.R:134:3', 'test-9-mvn-simulation.R:159:3', 'test-9-mvn-simulation.R:232:3', 'test-9-mvn-simulation.R:307:3', 'test-aniso-plots.R:2:3', 'test-cross-validation.R:3:3', 'test-cross-validation.R:51:3', 'test-cross-validation.R:68:3', 'test-cross-validation.R:95:3', 'test-cross-validation.R:232:3', 'test-delta-population-predictions.R:2:3', 'test-delta.R:6:3', 'test-delta.R:51:3', 'test-delta.R:63:3', 'test-delta.R:81:3', 'test-delta.R:95:3', 'test-delta.R:109:3', 'test-delta.R:122:3', 'test-delta.R:181:3', 'test-delta.R:226:3', 'test-deprecated-args.R:2:3', 'test-deprecated-args.R:65:3', 'test-dharma.R:2:3', 'test-extra-optimization.R:2:3', 'test-extra-time.R:3:3', 'test-extra-time.R:45:3', 'test-extra-time.R:119:3', 'test-extra-time.R:183:3', 'test-extra-time.R:208:3', 'test-factor-levels.R:2:3', 'test-factor-levels.R:36:3', 'test-factor-levels.R:89:3', 'test-forecasting.R:2:3', 'test-index.R:2:3', 'test-index.R:34:3', 'test-index.R:76:3', 'test-link-prediction.R:5:3', 'test-link-prediction.R:66:3', 'test-links.R:2:3', 'test-methods.R:2:3', 'test-methods.R:31:3', 'test-mix.R:2:3', 'test-mix.R:60:3', 'test-mix.R:75:3', 'test-mix.R:93:3', 'test-mix.R:112:3', 'test-nonstationary.R:116:3', 'test-nonstationary.R:161:3', 'test-nonstationary.R:207:3', 'test-nonstationary.R:234:3', 'test-nonstationary.R:285:3', 'test-offset.R:2:3', 'test-offset.R:19:3', 'test-offset.R:79:3', 'test-offset.R:98:3', 'test-parameter-bounds.R:11:3', 'test-prediction-missing-years.R:2:3', 'test-priors.R:22:3', 'test-priors.R:67:3', 'test-priors.R:121:3', 'test-random-intercepts.R:11:3', 'test-random-intercepts.R:125:3', 'test-random-intercepts.R:160:3', 'test-random-intercepts.R:264:3', 'test-random-intercepts.R:302:3', 'test-reml.R:2:3', 'test-reml.R:73:3', 'test-sanity.R:2:3', 'test-sdmTMB-simulate.R:2:3', 'test-smooths.R:4:3', 'test-smooths.R:15:3', 'test-smooths.R:50:3', 'test-smooths.R:86:3', 'test-smooths.R:123:3', 'test-smooths.R:200:3', 'test-smooths.R:250:3', 'test-smooths.R:272:3', 'test-smooths.R:294:3', 'test-smooths.R:314:3', 'test-smooths.R:335:3', 'test-smooths.R:355:3', 'test-smooths.R:371:3', 'test-smooths.R:387:3', 'test-smooths.R:403:3', 'test-smooths.R:419:3', 'test-smooths.R:429:3', 'test-smooths.R:445:3', 'test-smooths.R:463:3', 'test-threshold-models.R:2:3', 'test-threshold-models.R:17:3', 'test-threshold-models.R:30:3', 'test-1-fit-basic.R:128:3', 'test-1-fit-basic.R:177:3', 'test-1-fit-basic.R:219:3', 'test-time-varying.R:2:3', 'test-time-varying.R:75:3', 'test-tmb-simulation.R:2:3', 'test-tmb-simulation.R:34:3', 'test-tmb-simulation.R:71:3', 'test-tmb-simulation.R:121:3', 'test-tmb-simulation.R:170:3', 'test-utm-conversions.R:2:3', 'test-without-spatial.R:2:3' [ FAIL 0 | WARN 0 | SKIP 159 | PASS 191 ] > > proc.time() user system elapsed 11.09 0.56 47.36