test_that("Depreciated args work/throw warnings/stops", { skip_on_cran() skip_on_ci() # fields expect_error(m1 <- sdmTMB( formula = density ~ 1, data = pcod_2011, fields = "AR1", time = "year", mesh = pcod_mesh_2011, do_fit = FALSE ), regexp = "fields") expect_error(m3 <- sdmTMB( formula = density ~ 1, data = pcod_2011, ar1_fields = TRUE, time = "year", mesh = pcod_mesh_2011, do_fit = FALSE ), "ar1_fields") # spatial_only expect_error(m1 <- sdmTMB( formula = density ~ 1, data = pcod_2011, spatial_only = TRUE, time = "year", mesh = pcod_mesh_2011, do_fit = FALSE ), regexp = "spatial_only") # include_spatial expect_error(m1 <- sdmTMB( formula = density ~ 1, data = pcod_2011, include_spatial = FALSE, time = "year", mesh = pcod_mesh_2011, do_fit = FALSE ), regexp = "include_spatial") }) # test_that("spatial = off and spatiotemporal = off triggers map_rf", { # skip_on_cran() # skip_on_ci() # skip_if_not_installed("INLA") # m1 <- sdmTMB( # formula = density ~ 1, # data = pcod_2011, # spatial = "off", # spatiotemporal = "off", # mesh = pcod_mesh_2011 # ) # m2 <- sdmTMB( # formula = density ~ 1, # data = pcod_2011, # control = sdmTMBcontrol(map_rf = TRUE), # mesh = pcod_mesh_2011 # ) # expect_equal(m1$model$par, m2$model$par) # }) test_that("spde/mesh args work", { skip_on_cran() skip_on_ci() expect_error( m1 <- sdmTMB(density ~ 1, data = pcod_2011, spde = pcod_mesh_2011, do_fit = FALSE), "mesh" ) m2 <- sdmTMB(density ~ 1, data = pcod_2011, mesh = pcod_mesh_2011, do_fit = FALSE) })