R Under development (unstable) (2024-01-17 r85813 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > options(Matrix.warnDeprecatedCoerce = 2) > > library(testthat) > library(sdmTMB) > > test_check("sdmTMB") Starting 2 test processes [ FAIL 0 | WARN 0 | SKIP 142 | PASS 152 ] ══ Skipped tests (142) ═════════════════════════════════════════════════════════ • On CRAN (142): 'test-2-fit-less-basic.R:2:3', 'test-2-fit-less-basic.R:33:3', 'test-2-fit-less-basic.R:86:3', 'test-2-fit-less-basic.R:103:3', 'test-2-fit-less-basic.R:175:3', 'test-2-fit-less-basic.R:194:3', 'test-2-fit-less-basic.R:245:3', 'test-2-fit-less-basic.R:253:3', 'test-2-fit-less-basic.R:283:3', 'test-2-fit-less-basic.R:302:3', 'test-2-fit-less-basic.R:326:3', 'test-2-fit-less-basic.R:371:3', 'test-2-fit-less-basic.R:383:3', 'test-2-fit-less-basic.R:437:3', 'test-2-print-anisotropy.R:2:3', 'test-3-families.R:40:3', 'test-3-families.R:61:3', 'test-3-families.R:81:3', 'test-3-families.R:97:3', 'test-3-families.R:133:3', 'test-3-families.R:148:3', 'test-3-families.R:162:3', 'test-3-families.R:180:3', 'test-3-families.R:204:3', 'test-3-spatial-varying.R:2:3', 'test-3-spatial-varying.R:95:3', 'test-3-spatial-varying.R:121:3', 'test-3-spatial-varying.R:142:3', 'test-4-index-calculation.R:4:3', 'test-4-index-calculation.R:60:3', 'test-5-residuals.R:21:3', 'test-5-residuals.R:184:3', 'test-5-residuals.R:285:3', 'test-6-tmb-simulation.R:3:3', 'test-6-tmb-simulation.R:36:3', 'test-6-tmb-simulation.R:72:3', 'test-6-tmb-simulation.R:125:3', 'test-7-visreg.R:2:3', 'test-8-delta2.R:2:3', 'test-8-delta2.R:78:3', 'test-8-delta2.R:148:3', 'test-8-delta2.R:255:3', 'test-8-delta2.R:349:3', 'test-8-delta2.R:429:3', 'test-8-delta2.R:479:3', 'test-9-mvn-simulation.R:2:3', 'test-9-mvn-simulation.R:27:3', 'test-9-mvn-simulation.R:53:3', 'test-9-mvn-simulation.R:137:3', 'test-9-mvn-simulation.R:163:3', 'test-9-mvn-simulation.R:237:3', 'test-9-mvn-simulation.R:313:3', 'test-aniso-plots.R:3:3', 'test-cross-validation.R:3:3', 'test-cross-validation.R:53:3', 'test-cross-validation.R:70:3', 'test-cross-validation.R:98:3', 'test-cross-validation.R:236:3', 'test-delta-population-predictions.R:2:3', 'test-delta.R:6:3', 'test-delta.R:53:3', 'test-delta.R:66:3', 'test-delta.R:83:3', 'test-delta.R:97:3', 'test-delta.R:112:3', 'test-delta.R:126:3', 'test-deprecated-args.R:2:3', 'test-deprecated-args.R:67:3', 'test-dharma.R:3:3', 'test-extra-optimization.R:2:3', 'test-extra-time.R:3:3', 'test-extra-time.R:42:3', 'test-factor-levels.R:2:3', 'test-factor-levels.R:37:3', 'test-factor-levels.R:91:3', 'test-forecasting.R:2:3', 'test-index.R:3:3', 'test-link-prediction.R:5:3', 'test-link-prediction.R:67:3', 'test-links.R:2:3', 'test-methods.R:3:3', 'test-methods.R:33:3', 'test-mix.R:3:3', 'test-mix.R:62:3', 'test-mix.R:78:3', 'test-mix.R:97:3', 'test-mix.R:117:3', 'test-nonstationary.R:118:3', 'test-nonstationary.R:164:3', 'test-nonstationary.R:211:3', 'test-nonstationary.R:239:3', 'test-nonstationary.R:290:3', 'test-offset.R:2:3', 'test-offset.R:20:3', 'test-offset.R:81:3', 'test-offset.R:101:3', 'test-parameter-bounds.R:11:3', 'test-prediction-missing-years.R:2:3', 'test-priors.R:23:3', 'test-priors.R:69:3', 'test-priors.R:124:3', 'test-random-intercepts.R:11:3', 'test-random-intercepts.R:125:3', 'test-random-intercepts.R:160:3', 'test-random-intercepts.R:264:3', 'test-reml.R:2:3', 'test-reml.R:74:3', 'test-sanity.R:2:3', 'test-sdmTMB-simulate.R:2:3', 'test-smooths.R:4:3', 'test-smooths.R:16:3', 'test-smooths.R:52:3', 'test-smooths.R:89:3', 'test-smooths.R:127:3', 'test-smooths.R:205:3', 'test-smooths.R:256:3', 'test-smooths.R:279:3', 'test-smooths.R:302:3', 'test-smooths.R:323:3', 'test-smooths.R:345:3', 'test-smooths.R:366:3', 'test-smooths.R:383:3', 'test-smooths.R:400:3', 'test-smooths.R:417:3', 'test-smooths.R:434:3', 'test-smooths.R:445:3', 'test-smooths.R:462:3', 'test-smooths.R:481:3', 'test-threshold-models.R:2:3', 'test-threshold-models.R:18:3', 'test-threshold-models.R:32:3', 'test-time-varying.R:2:3', 'test-time-varying.R:76:3', 'test-tmb-simulation.R:3:3', 'test-tmb-simulation.R:36:3', 'test-tmb-simulation.R:74:3', 'test-tmb-simulation.R:125:3', 'test-utm-conversions.R:2:3', 'test-without-spatial.R:2:3', 'test-1-fit-basic.R:129:3', 'test-1-fit-basic.R:178:3', 'test-1-fit-basic.R:221:3' [ FAIL 0 | WARN 0 | SKIP 142 | PASS 152 ] > > proc.time() user system elapsed 11.35 0.76 53.79