# sdc without missing set.seed(3) sample_Data <- runif(30, 1, 100) sample_Data <- array(sample_Data, dim = c(10,3)) sample_Data <- cbind(sample_Data, round(runif(10, 1, 4), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(10, 1, 6), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(10, 1, 3), digits = 0)) colnames(sample_Data) <- c("Var1", "Var2", "Var3", "Var4", "Var5", "Var6") sample_Data[,4] <- as.factor(as.numeric(sample_Data[,4])) sample_Data[,5] <- as.factor(as.numeric(sample_Data[,5])) sample_Data[,6] <- as.factor(as.numeric(sample_Data[,6])) sample_Data <- createSdcObj(sample_Data, keyVars = c("Var4", "Var5", "Var6"), numVars = c("Var1", "Var2", "Var3")) test_that("sdc without missing, DisFraction = default)", { sample_Data <- calcRisks(sample_Data) expect_equal(sample_Data@risk$global$risk, 0.8) expect_equal(sample_Data@risk$global$risk_ER, 8) expect_equal(sample_Data@risk$global$risk_pct, 80) expect_equal(sample_Data@risk$global$threshold, 0) expect_equal(sample_Data@risk$global$max_risk, 0.01) expect_equal(sample_Data@risk$individual[,1], c(0.5, 1.0, 0.5, 1.0, 1.0, 0.5, 1.0, 0.5, 1.0, 1.0)) expect_equal(sample_Data@risk$individual[,2], c(2, 1, 2, 1, 1, 2, 1, 2, 1, 1)) expect_equal(sample_Data@risk$individual[,3], c(2, 1, 2, 1, 1, 2, 1, 2, 1, 1)) expect_equal(sample_Data@risk$numeric, 1) }) # sdc with missing set.seed(3) sample_Data <- runif(20, 1, 100) sample_Data <- array(sample_Data, dim = c(4,5)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 2), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 4), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 6), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 3), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 5), digits = 0)) sample_Data <- cbind(sample_Data, round(runif(4, 1, 2), digits = 0)) colnames(sample_Data) <- c("Var1", "Var2", "Var3", "Var4", "Var5", "Var6", "Var7", "Var8", "Var9", "Var10", "Var11") sample_Data[,6] <- as.factor(as.numeric(sample_Data[,6])) sample_Data[,7] <- as.factor(as.numeric(sample_Data[,7])) sample_Data[,8] <- as.factor(as.numeric(sample_Data[,8])) sample_Data[,9] <- as.factor(as.numeric(sample_Data[,9])) sample_Data[,10] <- as.factor(as.numeric(sample_Data[,10])) sample_Data[,11] <- as.factor(as.numeric(sample_Data[,11])) sample_Data[c(1,3,4),6] <- NA sample_Data[c(2,3),7] <- NA sample_Data[c(3),8] <- NA sample_Data[c(1,3),9] <- NA sample_Data[c(2,3),10] <- NA sample_Data[c(3),11] <- NA sample_Data <- createSdcObj(sample_Data, keyVars = c("Var6", "Var7", "Var8", "Var9", "Var10", "Var11"), numVars=c("Var1", "Var2", "Var3", "Var4", "Var5")) test_that("sdc without missing, DisFraction = default)", { sample_Data <- calcRisks(sample_Data) expect_equal(sample_Data@risk$global$risk, 0.4375) expect_equal(sample_Data@risk$global$risk_ER, 1.75) expect_equal(sample_Data@risk$global$risk_pct, 43.75) expect_equal(sample_Data@risk$global$threshold, 0) expect_equal(sample_Data@risk$global$max_risk, 0.01) expect_equal(sample_Data@risk$individual[,1], c(0.50, 0.50, 0.25, 0.50)) expect_equal(sample_Data@risk$individual[,2], c(2, 2, 4, 2)) expect_equal(sample_Data@risk$individual[,3], c(2, 2, 4, 2)) expect_equal(sample_Data@risk$numeric, 1) })