downloading reverse dependencies ... downloading cellKey_1.0.2.tar.gz ... ok downloading sdcTable_0.32.7.tar.gz ... ok downloading SmallCountRounding_1.2.0.tar.gz ... ok installing dependencies ‘glpkAPI’, ‘ptable’, ‘RegSDC’, ‘sdcHierarchies’, ‘sdcTable’, ‘shinyTree’, ‘SSBtools’ begin installing package ‘shinyTree’ begin installing package ‘ptable’ begin installing package ‘glpkAPI’ begin installing package ‘SSBtools’ * installing *source* package ‘shinyTree’ ... ** this is package ‘shinyTree’ version ‘0.3.1’ ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) begin installing package ‘sdcHierarchies’ * installing *source* package ‘ptable’ ... ** this is package ‘ptable’ version ‘1.0.0’ ** package ‘ptable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘plot’ in package ‘ptable’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ptable) * installing *source* package ‘glpkAPI’ ... ** this is package ‘glpkAPI’ version ‘1.3.4’ ** package ‘glpkAPI’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc-14 -std=gnu23 -E checking for prefix by checking for glpsol... no configure: No prefix given, trying /usr and /usr/local checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking glpk.h usability... yes checking glpk.h presence... yes checking for glpk.h... yes checking for library containing glp_create_prob... none required checking for glp_print_ranges... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzuH251/R.INSTALLdb7044de07dbf/glpkAPI/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkAPI.c -o glpkAPI.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkCallback.c -o glpkCallback.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o glpkAPI.so glpkAPI.o glpkCallback.o init.o -L/usr/local/lib -L/usr/lib -L/usr/lib64 -lglpk -lgmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzuH251/R.INSTALLdb7044de07dbf/glpkAPI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-glpkAPI/00new/glpkAPI/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glpkAPI) * installing *source* package ‘SSBtools’ ... ** this is package ‘SSBtools’ version ‘1.8.0’ ** package ‘SSBtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SSBtools) begin installing package ‘RegSDC’ * installing *source* package ‘RegSDC’ ... ** this is package ‘RegSDC’ version ‘1.0.0’ ** package ‘RegSDC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RegSDC) * installing *source* package ‘sdcHierarchies’ ... ** this is package ‘sdcHierarchies’ version ‘0.22.0’ ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpmnja8P/R.INSTALLdbab26db2190b/sdcHierarchies/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util-functions.cpp -o util-functions.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:189, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27, from util-functions.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:532:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:525:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:514:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1168:32, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1148:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1131:33, inlined from ‘Rcpp::List rcpp_leafinfo(Rcpp::DataFrame, Rcpp::CharacterVector)’ at util-functions.cpp:266:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: ‘level’ may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ util-functions.cpp: In function ‘Rcpp::List rcpp_leafinfo(Rcpp::DataFrame, Rcpp::CharacterVector)’: util-functions.cpp:199:7: note: ‘level’ was declared here 199 | int level; | ^~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sdcHierarchies.so RcppExports.o util-functions.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpmnja8P/R.INSTALLdbab26db2190b/sdcHierarchies/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sdcHierarchies/00new/sdcHierarchies/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sdcHierarchies) begin installing package ‘sdcTable’ * installing *source* package ‘sdcTable’ ... ** this is package ‘sdcTable’ version ‘0.32.7’ ** package ‘sdcTable’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3IiVIX/R.INSTALLdbbac3ce4a13a/sdcTable/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp_helpers.cpp -o cpp_helpers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c csp.cpp -o csp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c normQuader2.cpp -o normQuader2.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sdcTable.c -o sdcTable.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c suppConstraints.cpp -o suppConstraints.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c suppMultDimTable.cpp -o suppMultDimTable.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sdcTable.so RcppExports.o cpp_helpers.o csp.o init.o normQuader2.o sdcTable.o suppConstraints.o suppMultDimTable.o -lglpk -lgmp -lm -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3IiVIX/R.INSTALLdbbac3ce4a13a/sdcTable/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sdcTable/00new/sdcTable/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sdcTable) checking sdcHierarchies_0.22.0.tar.gz ... checking cellKey_1.0.2.tar.gz ... checking sdcTable_0.32.7.tar.gz ... checking SmallCountRounding_1.2.0.tar.gz ... Depends: Package: sdcHierarchies Depends: shinythemes Imports: shiny, shinyjs, shinyTree, jsonlite, rlang, data.table, cli, Rcpp LinkingTo: Rcpp Timings: user system elapsed sdcHierarchies 45.141 4.922 50.837 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 0 3 Check results summary: sdcHierarchies ... NOTE * checking CRAN incoming feasibility ... [5s/5s] NOTE rdepends_cellKey ... OK rdepends_sdcTable ... OK rdepends_SmallCountRounding ... OK