installing dependencies ‘ontoProc’, ‘rrvgo’ also installing the dependencies ‘paintmap’, ‘BiocVersion’, ‘BiocBaseUtils’, ‘dir.expiry’, ‘ontologyPlot’, ‘AnnotationHub’, ‘basilisk’, ‘treemap’ begin installing package ‘paintmap’ begin installing package ‘BiocBaseUtils’ begin installing package ‘BiocVersion’ begin installing package ‘dir.expiry’ begin installing package ‘treemap’ * installing *source* package ‘BiocVersion’ ... ** this is package ‘BiocVersion’ version ‘3.22.0’ ** package ‘BiocVersion’ successfully unpacked and MD5 sums checked ** using staged installation ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocVersion) * installing *source* package ‘paintmap’ ... ** this is package ‘paintmap’ version ‘1.0’ ** package ‘paintmap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paintmap) begin installing package ‘ontologyPlot’ * installing *source* package ‘dir.expiry’ ... ** this is package ‘dir.expiry’ version ‘1.17.0’ ** package ‘dir.expiry’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dir.expiry) begin installing package ‘basilisk’ * installing *source* package ‘BiocBaseUtils’ ... ** this is package ‘BiocBaseUtils’ version ‘1.11.2’ ** package ‘BiocBaseUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocBaseUtils) begin installing package ‘AnnotationHub’ * installing *source* package ‘ontologyPlot’ ... ** this is package ‘ontologyPlot’ version ‘1.7’ ** package ‘ontologyPlot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ontologyPlot) * installing *source* package ‘basilisk’ ... ** this is package ‘basilisk’ version ‘1.21.5’ ** package ‘basilisk’ successfully unpacked and MD5 sums checked ** using non-staged installation via StagedInstall field ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (basilisk) * installing *source* package ‘treemap’ ... ** this is package ‘treemap’ version ‘2.4-4’ ** package ‘treemap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (treemap) begin installing package ‘rrvgo’ * installing *source* package ‘AnnotationHub’ ... ** this is package ‘AnnotationHub’ version ‘3.99.6’ ** package ‘AnnotationHub’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AnnotationHub) begin installing package ‘ontoProc’ * installing *source* package ‘rrvgo’ ... ** this is package ‘rrvgo’ version ‘1.21.5’ ** package ‘rrvgo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rrvgo) * installing *source* package ‘ontoProc’ ... ** this is package ‘ontoProc’ version ‘2.3.11’ ** package ‘ontoProc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ontoProc) checking scDiffCom_1.2.0.tar.gz ... Depends: Package: scDiffCom Depends: R (>= 4.0.0) Imports: data.table, DelayedArray, future, future.apply, lifecycle, magrittr, methods, Seurat (>= 5.0.0), stats, utils Timings: user system elapsed scDiffCom 434.885 14.868 382.177 Results: Check status summary: ERROR Source packages 1 Check results summary: scDiffCom ... ERROR * checking tests ... [313s/241s] ERROR