downloading reverse dependencies ... downloading BEACH_1.3.1.tar.gz ... ok downloading rfars_1.2.0.tar.gz ... ok downloading stpm_1.7.12.tar.gz ... ok downloading causaldrf_0.4.2.tar.gz ... ok installing dependencies ‘BayesTree’, ‘sas7bdat’ begin installing package ‘sas7bdat’ begin installing package ‘BayesTree’ * installing *source* package ‘sas7bdat’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sas7bdat) * installing *source* package ‘BayesTree’ ... ** package ‘BayesTree’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjEWF4D/R.INSTALL374d461411efc6/BayesTree/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c BirthDeath.cpp -o BirthDeath.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ChangeRule.cpp -o ChangeRule.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Funs.cpp -o Funs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Lib.cpp -o Lib.o Lib.cpp: In static member function ‘static void Lib::sortedUnique(int, double*, Vec&)’: Lib.cpp:89:11: warning: unused variable ‘nu’ [-Wunused-variable] 89 | vec_sz nu = 1; | ^~ Lib.cpp: In static member function ‘static void Lib::acov(Vec&, int, Vec&, bool)’: Lib.cpp:114:32: warning: typedef ‘ST’ locally defined but not used [-Wunused-local-typedefs] 114 | typedef Vec::size_type ST; | ^~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Likelihood.cpp -o Likelihood.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c List.cpp -o List.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c MuS.cpp -o MuS.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Node.cpp -o Node.o Node.cpp: In member function ‘void Node::currentFits(MuS*, int, double**, double*, int, double**, double*, double**)’: Node.cpp:629:60: warning: ‘indPartTest’ may be used uninitialized [-Wmaybe-uninitialized] 629 | for(int j=1;j<=nTest;j++) {if(indPartTest[j]==i) fits[2][j]=nodeMu; } | ~~~~~~~~~~~~~^ Node.cpp:602:14: note: ‘indPartTest’ was declared here 602 | int* indPartTest; | ^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Prior.cpp -o Prior.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Rlob.cpp -o Rlob.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Swap.cpp -o Swap.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mbart.cpp -o mbart.o mbart.cpp: In function ‘void mbart(int*, int*, int*, double*, double*, double*, double*, int*, double*, double*, double*, double*, double*, int*, int*, int*, int*, int*, int*, int*, int*, int*, double*, double*, double*, int*)’: mbart.cpp:386:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 386 | if(!binary) sdraw[scnt] = sd.getS(); scnt++; | ^~ mbart.cpp:386:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 386 | if(!binary) sdraw[scnt] = sd.getS(); scnt++; | ^~~~ mbart.cpp:300:11: warning: variable ‘alpha’ set but not used [-Wunused-but-set-variable] 300 | double alpha=0.0; | ^~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o BayesTree.so BirthDeath.o ChangeRule.o Funs.o Lib.o Likelihood.o List.o MuS.o Node.o Prior.o Rlob.o Swap.o mbart.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjEWF4D/R.INSTALL374d461411efc6/BayesTree/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-BayesTree/00new/BayesTree/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BayesTree) checking sas7bdat_0.8.tar.gz ... checking BEACH_1.3.1.tar.gz ... checking rfars_1.2.0.tar.gz ... checking stpm_1.7.12.tar.gz ... checking causaldrf_0.4.2.tar.gz ... Depends: Package: sas7bdat Depends: R (>= 2.10) Timings: user system elapsed sas7bdat 18.002 3.157 21.532 Results: Check status summary: OK Source packages 1 Reverse depends 4 Check results summary: sas7bdat ... OK rdepends_BEACH ... OK rdepends_causaldrf ... OK rdepends_rfars ... OK rdepends_stpm ... OK Warning in normalizePath(dir) : path[1]="/home/hornik/tmp/CRAN": No such file or directory Calls: -> normalizePath Warning in normalizePath(dir) : path[1]="/home/hornik/tmp/CRAN": No such file or directory Calls: -> R_check_outdirs -> normalizePath