* installing *source* package ‘samara’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 18.1.8 (1+b1)’
using C++11
clang++-18  -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I. -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   26 | #define R_NO_REMAP
      |         ^
<command line>:4:9: note: previous definition is here
    4 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
clang++-18  -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I. -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c rcpp_samara.cpp -o rcpp_samara.o
In file included from rcpp_samara.cpp:1:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27:
In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:30:
/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/r/headers.h:26:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   26 | #define R_NO_REMAP
      |         ^
<command line>:4:9: note: previous definition is here
    4 | #define R_NO_REMAP 1
      |         ^
In file included from rcpp_samara.cpp:4:
In file included from ./rsamara_types.hpp:10:
In file included from ./samara.h:4:
./samara_defines.h:19:20: warning: unused function 'FloatToStr' [-Wunused-function]
   19 | static std::string FloatToStr(double val) {
      |                    ^~~~~~~~~~
2 warnings generated.
clang++-18  -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I. -fpic  -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c samara.cpp -o samara.o
In file included from samara.cpp:3:
./processes/processes.h:2023:31: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
 2023 |             A_GrowthStructTot = A_GrowthStructTot;
      |             ~~~~~~~~~~~~~~~~~ ^ ~~~~~~~~~~~~~~~~~
samara.cpp:50:10: warning: variable 'simulationFinished' set but not used [-Wunused-but-set-variable]
   50 |     bool simulationFinished = false;
      |          ^
samara.cpp:58:10: warning: expression result unused [-Wunused-value]
   58 |     for (DateEnCours; DateEnCours < DateFinSimul; DateEnCours++) {
      |          ^~~~~~~~~~~
samara.cpp:358:10: warning: expression result unused [-Wunused-value]
  358 |     for (DateEnCours; DateEnCours < DateFinSimul; DateEnCours++) {
      |          ^~~~~~~~~~~
samara.cpp:719:12: warning: logical not is only applied to the left hand side of this comparison [-Wlogical-not-parentheses]
  719 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^         ~~
samara.cpp:719:12: note: add parentheses after the '!' to evaluate the comparison first
  719 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |             (            )
samara.cpp:719:12: note: add parentheses around left hand side expression to silence this warning
  719 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |            (        )
samara.cpp:651:10: warning: expression result unused [-Wunused-value]
  651 |     for (DateEnCours; DateEnCours < DateFinSimul; DateEnCours++) {
      |          ^~~~~~~~~~~
samara.cpp:1040:12: warning: logical not is only applied to the left hand side of this comparison [-Wlogical-not-parentheses]
 1040 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^         ~~
samara.cpp:1040:12: note: add parentheses after the '!' to evaluate the comparison first
 1040 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |             (            )
samara.cpp:1040:12: note: add parentheses around left hand side expression to silence this warning
 1040 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |            (        )
samara.cpp:1135:3: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
 1135 |                 if (crop)samara::RS_EvalSlaMitch_V2_2(SlaMax, SlaMin, AttenMitch, SumDegresDay, SDJLevee, NumPhase, DegresDuJourCor, TOpt1, TBase,
      |                 ^
samara.cpp:1133:9: note: previous statement is here
 1133 |         if(crop)samara::RS_EvalClumpAndLightInter_V2_1(NumPhase, KRolling, Density, PlantWidth, PlantHeight, Kdf, Lai, FractionPlantHeightSubmer, LIRkdf, LIRkdfcl, LTRkdf, LTRkdfcl);
      |         ^
samara.cpp:964:10: warning: expression result unused [-Wunused-value]
  964 |     for (DateEnCours; DateEnCours < DateFinSimul; DateEnCours++) {
      |          ^~~~~~~~~~~
samara.cpp:1371:12: warning: logical not is only applied to the left hand side of this comparison [-Wlogical-not-parentheses]
 1371 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^         ~~
samara.cpp:1371:12: note: add parentheses after the '!' to evaluate the comparison first
 1371 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |             (            )
samara.cpp:1371:12: note: add parentheses around left hand side expression to silence this warning
 1371 |         if(!NumPhase == 0 && !(NumPhase == 1 && ChangePhase == 1)) samara::EvalETRETM(Evap, Tr, TrPot, ETM, ETR);
      |            ^
      |            (        )
samara.cpp:1293:10: warning: expression result unused [-Wunused-value]
 1293 |     for (DateEnCours; DateEnCours < DateFinSimul; DateEnCours++) {
      |          ^~~~~~~~~~~
samara.cpp:1706:17: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
 1706 |         if ((Rg == NilValue)) {
      |              ~~~^~~~~~~~~~~
samara.cpp:1706:17: note: remove extraneous parentheses around the comparison to silence this warning
 1706 |         if ((Rg == NilValue)) {
      |             ~   ^          ~
samara.cpp:1706:17: note: use '=' to turn this equality comparison into an assignment
 1706 |         if ((Rg == NilValue)) {
      |                 ^~
      |                 =
samara.cpp:1726:21: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
 1726 |             VPDCalc = VPDCalc;
      |             ~~~~~~~ ^ ~~~~~~~
samara.cpp:1728:18: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
 1728 |         if ((ETP == NilValue)) {
      |              ~~~~^~~~~~~~~~~
samara.cpp:1728:18: note: remove extraneous parentheses around the comparison to silence this warning
 1728 |         if ((ETP == NilValue)) {
      |             ~    ^          ~
samara.cpp:1728:18: note: use '=' to turn this equality comparison into an assignment
 1728 |         if ((ETP == NilValue)) {
      |                  ^~
      |                  =
samara.cpp:1779:21: warning: explicitly assigning value of variable of type 'double' to itself [-Wself-assign]
 1779 |             VPDCalc = VPDCalc;
      |             ~~~~~~~ ^ ~~~~~~~
samara.cpp:1781:18: warning: equality comparison with extraneous parentheses [-Wparentheses-equality]
 1781 |         if ((ETP == NilValue)) {
      |              ~~~~^~~~~~~~~~~
samara.cpp:1781:18: note: remove extraneous parentheses around the comparison to silence this warning
 1781 |         if ((ETP == NilValue)) {
      |             ~    ^          ~
samara.cpp:1781:18: note: use '=' to turn this equality comparison into an assignment
 1781 |         if ((ETP == NilValue)) {
      |                  ^~
      |                  =
In file included from samara.cpp:1:
In file included from ./samara.h:4:
./samara_defines.h:19:20: warning: unused function 'FloatToStr' [-Wunused-function]
   19 | static std::string FloatToStr(double val) {
      |                    ^~~~~~~~~~
17 warnings generated.
clang++-18 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o samara.so RcppExports.o rcpp_samara.o samara.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/samara.Rcheck/00LOCK-samara/00new/samara/libs
** R
** byte-compile and prepare package for lazy loading
** help
No man pages found in package  ‘samara’ 
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (samara)