downloading reverse dependencies ... downloading GrowthCurveME_0.1.11.tar.gz ... ok downloading mkin_1.2.10.tar.gz ... ok downloading nlive_0.8.0.tar.gz ... ok downloading varTestnlme_1.3.5.tar.gz ... ok installing dependencies ‘anocva’, ‘investr’, ‘lcmm’, ‘lmeresampler’, ‘merDeriv’, ‘nlraa’, ‘npde’, ‘Rmisc’, ‘saemix’, ‘sitar’ also installing the dependencies ‘nlmeU’, ‘HLMdiag’, ‘nonnest2’ begin installing package ‘nlmeU’ begin installing package ‘HLMdiag’ begin installing package ‘nonnest2’ begin installing package ‘npde’ begin installing package ‘investr’ begin installing package ‘nlraa’ begin installing package ‘lcmm’ begin installing package ‘Rmisc’ begin installing package ‘sitar’ begin installing package ‘anocva’ * installing *source* package ‘anocva’ ... ** this is package ‘anocva’ version ‘0.1.1’ ** package ‘anocva’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (anocva) * installing *source* package ‘nlmeU’ ... ** this is package ‘nlmeU’ version ‘0.70-9’ ** package ‘nlmeU’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmeU) * installing *source* package ‘Rmisc’ ... ** this is package ‘Rmisc’ version ‘1.5.1’ ** package ‘Rmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rmisc) * installing *source* package ‘investr’ ... ** this is package ‘investr’ version ‘1.4.2’ ** package ‘investr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (investr) * installing *source* package ‘nonnest2’ ... ** this is package ‘nonnest2’ version ‘0.5-8’ ** package ‘nonnest2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonnest2) begin installing package ‘merDeriv’ * installing *source* package ‘sitar’ ... ** this is package ‘sitar’ version ‘1.5.0’ ** package ‘sitar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sitar) * installing *source* package ‘merDeriv’ ... ** this is package ‘merDeriv’ version ‘0.2-5’ ** package ‘merDeriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (merDeriv) * installing *source* package ‘npde’ ... ** this is package ‘npde’ version ‘3.5’ ** package ‘npde’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (npde) begin installing package ‘saemix’ * installing *source* package ‘nlraa’ ... ** this is package ‘nlraa’ version ‘1.9.7’ ** package ‘nlraa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlraa) * installing *source* package ‘saemix’ ... ** this is package ‘saemix’ version ‘3.4’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (saemix) * installing *source* package ‘HLMdiag’ ... ** this is package ‘HLMdiag’ version ‘0.5.1’ ** package ‘HLMdiag’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLPuW0r/R.INSTALLcda9c3b3b24a0/HLMdiag/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HLMdiag_init.c -o HLMdiag_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c cooksd_obs.cpp -o cooksd_obs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c cooksd_subset.cpp -o cooksd_subset.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c covratio.cpp -o covratio.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c covtrace.cpp -o covtrace.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c linear_algebra_fnc.cpp -o linear_algebra_fnc.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -fpic -g -O2 -Wall -pedantic -mtune=native -c mdffits_subset.cpp -o mdffits_subset.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o HLMdiag.so HLMdiag_init.o cooksd_obs.o cooksd_subset.o covratio.o covtrace.o linear_algebra_fnc.o mdffits_subset.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLPuW0r/R.INSTALLcda9c3b3b24a0/HLMdiag/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-HLMdiag/00new/HLMdiag/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HLMdiag) begin installing package ‘lmeresampler’ * installing *source* package ‘lmeresampler’ ... ** this is package ‘lmeresampler’ version ‘0.2.4’ ** package ‘lmeresampler’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmeresampler) * installing *source* package ‘lcmm’ ... ** this is package ‘lcmm’ version ‘2.2.1’ ** package ‘lcmm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpH4IZOc/R.INSTALLcda8e6cc6eca5/lcmm/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c runiran.c -o runiran.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c compute.f90 -o compute.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixOrd.f90 -o hetmixOrd.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixlin.f90 -o hetmixlin.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixCont.f90 -o hetmixCont.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Jointhet.f90 -o Jointhet.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c calculusTransfo.f90 -o calculusTransfo.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictCont.f90 -o predictCont.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictMult.f90 -o predictMult.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c postprob2.f90 -o postprob2.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cvpl.f90 -o cvpl.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predictYcond.f90 -o predictYcond.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c mpjhet.f90 -o mpjhet.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hetmixMult.f90 -o hetmixMult.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c iteminfo.f90 -o iteminfo.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Integ.f90 -o Integ.o Integ.f90:23:28: 23 | integer :: ier, nmoins, kk, nvarprob, ncg, ncssg, nea, nef, nvc, nprob | 1 Warning: Unused variable ‘kk’ declared at (1) [-Wunused-variable] gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lcmm.so init.o runiran.o compute.o hetmixOrd.o hetmixlin.o hetmixCont.o Jointhet.o calculusTransfo.o predictCont.o predictMult.o postprob2.o cvpl.o predictYcond.o mpjhet.o hetmixMult.o iteminfo.o Integ.o -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpH4IZOc/R.INSTALLcda8e6cc6eca5/lcmm/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-lcmm/00new/lcmm/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lcmm) checking saemix_3.4.tar.gz ... checking GrowthCurveME_0.1.11.tar.gz ... checking mkin_1.2.10.tar.gz ... checking nlive_0.8.0.tar.gz ... checking varTestnlme_1.3.5.tar.gz ... Depends: Package: saemix Depends: npde (>= 3.2) Imports: graphics, stats, methods, gridExtra, ggplot2, grid, rlang, mclust, scales, MASS Timings: user system elapsed saemix 83.847 4.904 90.678 Results: Check status summary: OK Source packages 1 Reverse depends 4 Check results summary: saemix ... OK rdepends_GrowthCurveME ... OK rdepends_mkin ... OK rdepends_nlive ... OK rdepends_varTestnlme ... OK