context("Indent modifiers") test_that("indent modifiers propogated from analyze calls properly", { lyt <- basic_table() %>% analyze("Sepal.Width", afun = mean, show_labels = "visible") %>% analyze("Sepal.Width", afun = median, show_labels = "hidden", indent_mod = 2L, table_names = "SecondAge" ) tab <- build_table(lyt, iris) expect_equal(rtables:::indent_mod(tree_children(tab)[[2]]), 2L) expect_equal(make_row_df(tab)$indent, c(0, 1, 2)) }) test_that("indents are correct in make_row_df", { l1 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label") %>% summarize_row_groups("RACE", label_fstr = "%s (n)") %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label" ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx" ) t1 <- build_table(l1, rawdat) pgdf1 <- make_row_df(t1) expect_identical( rep(c(0, 1, 2, 2, 1, 2, 2), 2), pgdf1$indent ) l2 <- l1 %>% analyze("AGE", var_labels = "Age Analysis Redux", table_names = "AgeRedux", afun = range, format = "xx - xx" ) t2 <- build_table(l2, rawdat) pgdf2 <- make_row_df(t2) expect_identical( rep(c(0, 1, 2, 3, 3, 2, 3, 1, 2, 3, 3, 2, 3), 2), pgdf2$indent ) l3 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label") %>% summarize_row_groups("RACE", label_fstr = "%s (n)") %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label", indent_mod = 0 ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx", indent_mod = -1 ) t3 <- build_table(l3, rawdat) pgdf3 <- make_row_df(t3) expect_identical( rep(c(0, 1, 1, 1, 1, 1, 1), 2), pgdf3$indent ) l4 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label") %>% summarize_row_groups("RACE", label_fstr = "%s (n)") %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label", indent_mod = -1 ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx", indent_mod = 1 ) t4 <- build_table(l4, rawdat) pagdf4 <- make_row_df(t4) expect_identical( rep(c(0, 0, 2, 2, 0, 2, 2), 2), pagdf4$indent ) l5 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label", indent_mod = 2) %>% summarize_row_groups("RACE", label_fstr = "%s (n)") %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label", indent_mod = -2 ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx", indent_mod = 1 ) t5 <- build_table(l5, rawdat) pgdf5 <- make_row_df(t5) expect_identical( rep(c(2, 1, 3, 3, 1, 3, 3), 2), pgdf5$indent ) l6 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label", indent_mod = 0, label_pos = "visible" ) %>% summarize_row_groups("RACE", label_fstr = "%s (n)") %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label", indent_mod = 0 ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx", indent_mod = 0 ) t6 <- build_table(l6, rawdat) pgdf6 <- make_row_df(t6) expect_identical( c(0, rep(c(1, 2, 3, 3, 2, 3, 3), 2)), pgdf6$indent ) ## children inherit table idnent mod, NOT content indent_mod, when thsoe two ## values are different. l7 <- basic_table() %>% split_rows_by("RACE", "Ethnicity", labels_var = "ethn_label", indent_mod = 2, label_pos = "visible" ) %>% summarize_row_groups("RACE", label_fstr = "%s (n)", indent_mod = -1) %>% split_rows_by("FACTOR2", "Factor2", split_fun = remove_split_levels("C"), labels_var = "fac2_label", indent_mod = 0 ) %>% analyze( "AGE", "Age Analysis", afun = function(x) list(mean = mean(x), median = median(x)), format = "xx.xx", indent_mod = 0 ) t7 <- build_table(l7, rawdat) pgdf7 <- make_row_df(t7) expect_identical( c(2, rep(c(1, 3, 4, 4, 3, 4, 4), 2)), pgdf7$indent ) }) test_that("getters and setters work", { t0 <- basic_table() %>% summarize_row_groups("STUDYID", label_fstr = "overall summary") %>% split_rows_by("AEBODSYS", child_labels = "visible") %>% summarize_row_groups("STUDYID", label = "subgroup summary") %>% analyze("AGE") %>% build_table(ex_adae) expect_equal(indent_mod(t0), 0) tm3 <- t0 indent_mod(tm3) <- 3L expect_identical(indent_mod(tm3), 3L) cv <- CellValue(15) expect_equal(indent_mod(cv), 0) indent_mod(cv) <- 3L expect_equal(indent_mod(cv), 3) origimods <- c(hi = 0L, lo = 0L, med = 1L) rvs <- in_rows(hi = 5, lo = 2, med = 17.5, .indent_mods = origimods) expect_identical(indent_mod(rvs), origimods) indent_mod(rvs) <- c(2, 3, -1) sink(textConnection("outputstr2", open = "w")) print(rvs) sink(NULL) expect_equal( c(2, 3, -1), as.numeric(substr(outputstr2[4:6], 35, 36)) ) expect_equal( indent_mod(rvs), c(hi = 2, lo = 3, med = -1) ) spl <- VarLevelSplit("age", "myagesplit") expect_equal(indent_mod(spl), 0) indent_mod(spl) <- 3 expect_identical(indent_mod(spl), 3L) ## this tests implicit conversion }) test_that("clear_indent_mods works as desired", { lytm <- basic_table() %>% summarize_row_groups("STUDYID", label_fstr = "overall summary", indent_mod = 1L) %>% split_rows_by("AEBODSYS", child_labels = "visible") %>% summarize_row_groups("STUDYID", label = "subgroup summary") %>% analyze("AGE", indent_mod = -1L) tm <- build_table(lytm, ex_adae) t0 <- basic_table() %>% summarize_row_groups("STUDYID", label_fstr = "overall summary") %>% split_rows_by("AEBODSYS", child_labels = "visible") %>% summarize_row_groups("STUDYID", label = "subgroup summary") %>% analyze("AGE") %>% build_table(ex_adae) expect_identical( matrix_form(clear_indent_mods(tm)), matrix_form(t0) ) })