* installing *source* package ‘rstanarm’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 16.0.6 (13)’
using C++17
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/bernoulli.stan
Wrote C++ file "stan_files/bernoulli.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/bernoulli.cc -o stan_files/bernoulli.o
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/bernoulli.hpp:5169:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/bernoulli.hpp:6196:7: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_bernoulli_namespace::model_bernoulli>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/bernoulli.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  return ub - exp(x);
            ^
stan_files/bernoulli.hpp:3926:25: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, double, stan::math::var_value<double>>' requested here
            stan::math::ub_constrain(gamma[(sym1__ - 1)],
                        ^
stan_files/bernoulli.hpp:6208:14: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_bernoulli_namespace::model_bernoulli>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_bernoulli_namespace::model_bernoulli>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/bernoulli.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/bernoulli.hpp:4121:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/bernoulli.hpp:6208:14: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_bernoulli_namespace::model_bernoulli>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_bernoulli_namespace::model_bernoulli>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/bernoulli.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/bernoulli.hpp:4335:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/bernoulli.hpp:6208:14: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_bernoulli_namespace::model_bernoulli>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_bernoulli_namespace::model_bernoulli>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/bernoulli.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:166:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<double, -1, -1, 0> &, const stan::math::var_value<double> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/bernoulli.hpp:4400:13: note: in instantiation of function template specialization 'stan::math::bernoulli_logit_glm_lpmf<false, std::vector<int>, Eigen::Matrix<double, -1, -1, 0>, stan::math::var_value<double>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, nullptr>' requested here
            bernoulli_logit_glm_lpmf<false>(y, XS,
            ^
stan_files/bernoulli.hpp:6208:14: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_bernoulli_namespace::model_bernoulli::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_bernoulli_namespace::model_bernoulli>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_bernoulli_namespace::model_bernoulli>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/bernoulli.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_bernoulli_namespace::model_bernoulli, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/bernoulli.cc:3:
In file included from stan_files/bernoulli.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
67 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/binomial.stan
Wrote C++ file "stan_files/binomial.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/binomial.cc -o stan_files/binomial.o
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/binomial.hpp:4238:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/binomial.hpp:5155:7: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_binomial_namespace::model_binomial>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/binomial.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  return ub - exp(x);
            ^
stan_files/binomial.hpp:3132:25: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, double, stan::math::var_value<double>>' requested here
            stan::math::ub_constrain(gamma[(sym1__ - 1)],
                        ^
stan_files/binomial.hpp:5167:14: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_binomial_namespace::model_binomial>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_binomial_namespace::model_binomial>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/binomial.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/binomial.hpp:3327:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/binomial.hpp:5167:14: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_binomial_namespace::model_binomial>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_binomial_namespace::model_binomial>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/binomial.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/binomial.hpp:3541:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/binomial.hpp:5167:14: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_binomial_namespace::model_binomial>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_binomial_namespace::model_binomial>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/binomial.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/binomial_logit_lpmf.hpp:102:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, double, double, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/binomial.hpp:1562:18: note: in instantiation of function template specialization 'stan::math::binomial_logit_lpmf<false, std::vector<int>, std::vector<int>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>>' requested here
      lp = (lp + binomial_logit_lpmf<false>(y, trials, eta));
                 ^
stan_files/binomial.hpp:3674:28: note: in instantiation of function template specialization 'model_binomial_namespace::binom_lpmf<false, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>>' requested here
            lp_accum__.add(binom_lpmf<false>(y, trials, eta, link, pstream__));
                           ^
stan_files/binomial.hpp:5167:14: note: in instantiation of function template specialization 'model_binomial_namespace::model_binomial::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: (skipping 1 context in backtrace; use -ftemplate-backtrace-limit=0 to see all)
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_binomial_namespace::model_binomial>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_binomial_namespace::model_binomial>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/binomial.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_binomial_namespace::model_binomial, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/binomial.cc:3:
In file included from stan_files/binomial.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
67 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/continuous.stan
Wrote C++ file "stan_files/continuous.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/continuous.cc -o stan_files/continuous.o
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:3809:
In file included from ../inst/include/meta_header.hpp:4:
../inst/include/CODOLS.hpp:17:63: warning: unused variable 'T1__' [-Wunused-variable]
  typename boost::math::tools::promote_args<T2__, T3__>::type T1__;
                                                              ^
stan_files/continuous.hpp:5640:39: note: in instantiation of function template specialization 'model_continuous_namespace::CODOLS<double, double>' requested here
        assign(OLS, nil_index_list(), CODOLS(X_, y, pstream__),
                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/continuous.hpp:7961:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/continuous.hpp:9662:7: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/continuous.hpp:5894:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, double, double, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(gamma[(sym1__ - 1)],
                        ^
stan_files/continuous.hpp:9674:14: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_continuous_namespace::model_continuous>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/continuous.hpp:6091:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/continuous.hpp:9674:14: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_continuous_namespace::model_continuous>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/continuous.hpp:6493:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/continuous.hpp:9674:14: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_continuous_namespace::model_continuous>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/normal_id_glm_lpdf.hpp:212:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<double, -1, 1, 0> &, const Eigen::Matrix<double, -1, -1, 0> &, const stan::math::var_value<double> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, const stan::math::var_value<double> &, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/continuous.hpp:6707:15: note: in instantiation of function template specialization 'stan::math::normal_id_glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, -1, 0>, stan::math::var_value<double>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, nullptr>' requested here
              normal_id_glm_lpdf<false>(y, XS,
              ^
stan_files/continuous.hpp:9674:14: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_continuous_namespace::model_continuous>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
stan_files/continuous.hpp:2201:23: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
            + ((shape - 1) * sum_log_y));
                      ^
stan_files/continuous.hpp:6999:25: note: in instantiation of function template specialization 'model_continuous_namespace::GammaReg<Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double>' requested here
                        GammaReg(y, eta, aux, link, sum_log_y, pstream__));
                        ^
stan_files/continuous.hpp:9674:14: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_continuous_namespace::model_continuous::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_continuous_namespace::model_continuous>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_continuous_namespace::model_continuous>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/continuous.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_continuous_namespace::model_continuous, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/continuous.cc:3:
In file included from stan_files/continuous.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
69 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/count.stan
Wrote C++ file "stan_files/count.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/count.cc -o stan_files/count.o
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/count.hpp:4593:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/count.hpp:5698:7: note: in instantiation of function template specialization 'model_count_namespace::model_count::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_count_namespace::model_count::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_count_namespace::model_count>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/count.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/count.hpp:3397:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/count.hpp:5710:14: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_count_namespace::model_count>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_count_namespace::model_count>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/count.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/count.hpp:3397:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/count.hpp:5710:14: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_count_namespace::model_count>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_count_namespace::model_count>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/count.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/count.hpp:3669:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, nullptr>' requested here
            rvalue(smooth_sd,
            ^
stan_files/count.hpp:5710:14: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_count_namespace::model_count>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_count_namespace::model_count>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/count.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:166:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<double, -1, -1, 0> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/count.hpp:3767:17: note: in instantiation of function template specialization 'stan::math::poisson_log_glm_lpmf<false, std::vector<int>, Eigen::Matrix<double, -1, -1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, nullptr>' requested here
                poisson_log_glm_lpmf<false>(y, XS,
                ^
stan_files/count.hpp:5710:14: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_count_namespace::model_count::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_count_namespace::model_count>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_count_namespace::model_count>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/count.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_count_namespace::model_count, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/count.cc:3:
In file included from stan_files/count.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
67 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/jm.stan
Wrote C++ file "stan_files/jm.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/jm.cc -o stan_files/jm.o
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/jm.cc:3:
stan_files/jm.hpp:6224:15: warning: variable 'shift_nb' set but not used [-Wunused-but-set-variable]
          int shift_nb;
              ^
stan_files/jm.hpp:6227:15: warning: variable 'shift_lb' set but not used [-Wunused-but-set-variable]
          int shift_lb;
              ^
stan_files/jm.hpp:6230:15: warning: variable 'shift_ub' set but not used [-Wunused-but-set-variable]
          int shift_ub;
              ^
stan_files/jm.hpp:14508:13: warning: variable 'mark' set but not used [-Wunused-but-set-variable]
        int mark;
            ^
stan_files/jm.hpp:17265:13: warning: variable 'mark' set but not used [-Wunused-but-set-variable]
        int mark;
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/jm.hpp:17540:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0>, nullptr>' requested here
            rvalue(
            ^
stan_files/jm.hpp:19918:7: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
stan_files/jm.hpp:5230:15: warning: unused variable 'log_y' [-Wunused-variable]
  const auto& log_y = to_ref(log_y_arg__);
              ^
stan_files/jm.hpp:14671:13: note: in instantiation of function template specialization 'model_jm_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>, double, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:128:33: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<false, true, double>' requested here
      log_prob = model.template log_prob<false, Jacobian>(unconstrained,
                                ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
stan_files/jm.hpp:5832:15: warning: unused variable 'scale' [-Wunused-variable]
  const auto& scale = to_ref(scale_arg__);
              ^
stan_files/jm.hpp:16290:11: note: in instantiation of function template specialization 'model_jm_namespace::basehaz_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
          basehaz_lpdf<false>(e_aux_unscaled, e_prior_dist_for_aux,
          ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:128:33: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<false, true, double>' requested here
      log_prob = model.template log_prob<false, Jacobian>(unconstrained,
                                ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/jm.hpp:13373:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, double, double, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(yGamma1[(sym1__ - 1)],
                        ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/jm.hpp:13479:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
stan_files/jm.hpp:5230:15: warning: unused variable 'log_y' [-Wunused-variable]
  const auto& log_y = to_ref(log_y_arg__);
              ^
stan_files/jm.hpp:14671:13: note: in instantiation of function template specialization 'model_jm_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:113:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<double, -1, 1, 0> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, const stan::math::var_value<double> &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/jm.hpp:5245:20: note: in instantiation of function template specialization 'stan::math::normal_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, nullptr>' requested here
        lp = (lp + normal_lpdf<false>(y_real, eta, aux[(1 - 1)]));
                   ^
stan_files/jm.hpp:14671:13: note: in instantiation of function template specialization 'model_jm_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: (skipping 1 context in backtrace; use -ftemplate-backtrace-limit=0 to see all)
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
stan_files/jm.hpp:3706:23: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
            + ((shape - 1) * sum_log_y));
                      ^
stan_files/jm.hpp:5261:16: note: in instantiation of function template specialization 'model_jm_namespace::GammaReg<Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double>' requested here
               GammaReg(y_real, eta, aux[(1 - 1)], link,
               ^
stan_files/jm.hpp:14671:13: note: in instantiation of function template specialization 'model_jm_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
stan_files/jm.hpp:5832:15: warning: unused variable 'scale' [-Wunused-variable]
  const auto& scale = to_ref(scale_arg__);
              ^
stan_files/jm.hpp:16290:11: note: in instantiation of function template specialization 'model_jm_namespace::basehaz_lpdf<false, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
          basehaz_lpdf<false>(e_aux_unscaled, e_prior_dist_for_aux,
          ^
stan_files/jm.hpp:19930:14: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_jm_namespace::model_jm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_jm_namespace::model_jm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_jm_namespace::model_jm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/jm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_jm_namespace::model_jm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/jm.cc:3:
In file included from stan_files/jm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
76 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/lm.stan
Wrote C++ file "stan_files/lm.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/lm.cc -o stan_files/lm.o
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/lm.hpp:680:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(R2[(sym1__ - 1)],
                        ^
stan_files/lm.hpp:1319:14: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_lm_namespace::model_lm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_lm_namespace::model_lm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/lm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
stan_files/lm.hpp:735:42: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
          (Delta_y * stan::math::sqrt((1 - R2[(j - 1)]))),
                                         ^
stan_files/lm.hpp:1319:14: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_lm_namespace::model_lm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_lm_namespace::model_lm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/lm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:113:23: note: in instantiation of member function 'stan::math::operands_and_partials<const std::vector<stan::math::var_value<double>> &, const int &, const int &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/lm.hpp:786:26: note: in instantiation of function template specialization 'stan::math::normal_lpdf<false, std::vector<stan::math::var_value<double>>, int, int, nullptr>' requested here
          lp_accum__.add(normal_lpdf<false>(z_alpha, 0, 1));
                         ^
stan_files/lm.hpp:1319:14: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_lm_namespace::model_lm::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_lm_namespace::model_lm>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_lm_namespace::model_lm>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/lm.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_lm_namespace::model_lm, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/lm.cc:3:
In file included from stan_files/lm.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
65 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/mvmer.stan
Wrote C++ file "stan_files/mvmer.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/mvmer.cc -o stan_files/mvmer.o
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/mvmer.cc:3:
stan_files/mvmer.hpp:8826:13: warning: variable 'mark' set but not used [-Wunused-but-set-variable]
        int mark;
            ^
stan_files/mvmer.hpp:9840:13: warning: variable 'mark' set but not used [-Wunused-but-set-variable]
        int mark;
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:140:14: warning: unused variable 'v_size' [-Wunused-variable]
  const auto v_size = v.size();
             ^
stan_files/mvmer.hpp:10089:13: note: in instantiation of function template specialization 'stan::model::rvalue<Eigen::Matrix<double, -1, 1, 0>, nullptr>' requested here
            rvalue(
            ^
stan_files/mvmer.hpp:11870:7: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::write_array_impl<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>, std::vector<double>, std::vector<int>, std::vector<double>, nullptr, nullptr, nullptr>' requested here
      write_array_impl(base_rng, params_r, params_i, vars, emit_transformed_parameters, emit_generated_quantities, pstream);
      ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/random_var_context.hpp:77:11: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::write_array<boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    model.write_array(rng, unconstrained_params_, int_params,
          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:93:36: note: in instantiation of function template specialization 'stan::io::random_var_context::random_var_context<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
      stan::io::random_var_context random_context(model, rng, init_radius,
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
stan_files/mvmer.hpp:4402:15: warning: unused variable 'log_y' [-Wunused-variable]
  const auto& log_y = to_ref(log_y_arg__);
              ^
stan_files/mvmer.hpp:8972:13: note: in instantiation of function template specialization 'model_mvmer_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>, double, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<false, true, std::vector<double>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:128:33: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob<false, true, double>' requested here
      log_prob = model.template log_prob<false, Jacobian>(unconstrained,
                                ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/mvmer.hpp:8001:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, double, double, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(yGamma1[(sym1__ - 1)],
                        ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_mvmer_namespace::model_mvmer>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/ub_constrain.hpp:77:13: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
  return ub - exp(x);
            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:107:12: note: in instantiation of function template specialization 'stan::math::ub_constrain<stan::math::var_value<double>, int, stan::math::var_value<double>>' requested here
    return ub_constrain(x, ub, lp);
           ^
stan_files/mvmer.hpp:8107:25: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
            stan::math::lub_constrain(rho[(sym1__ - 1)], 0, 1, lp__),
                        ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_mvmer_namespace::model_mvmer>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
stan_files/mvmer.hpp:4402:15: warning: unused variable 'log_y' [-Wunused-variable]
  const auto& log_y = to_ref(log_y_arg__);
              ^
stan_files/mvmer.hpp:8972:13: note: in instantiation of function template specialization 'model_mvmer_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_mvmer_namespace::model_mvmer>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/normal_lpdf.hpp:113:23: note: in instantiation of member function 'stan::math::operands_and_partials<const Eigen::Matrix<double, -1, 1, 0> &, const Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0> &, const stan::math::var_value<double> &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(logp);
                      ^
stan_files/mvmer.hpp:4417:20: note: in instantiation of function template specialization 'stan::math::normal_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, nullptr>' requested here
        lp = (lp + normal_lpdf<false>(y_real, eta, aux[(1 - 1)]));
                   ^
stan_files/mvmer.hpp:8972:13: note: in instantiation of function template specialization 'model_mvmer_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: (skipping 1 context in backtrace; use -ftemplate-backtrace-limit=0 to see all)
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_mvmer_namespace::model_mvmer>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
stan_files/mvmer.hpp:2878:23: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
            + ((shape - 1) * sum_log_y));
                      ^
stan_files/mvmer.hpp:4433:16: note: in instantiation of function template specialization 'model_mvmer_namespace::GammaReg<Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double>' requested here
               GammaReg(y_real, eta, aux[(1 - 1)], link,
               ^
stan_files/mvmer.hpp:8972:13: note: in instantiation of function template specialization 'model_mvmer_namespace::glm_lpdf<false, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, stan::math::var_value<double>, double, Eigen::Matrix<double, -1, 1, 0>, Eigen::Matrix<double, -1, 1, 0>>' requested here
            glm_lpdf<false>(yReal1, yInt1, yEta1, yAux1, family[(1 - 1)],
            ^
stan_files/mvmer.hpp:11882:14: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_mvmer_namespace::model_mvmer::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_mvmer_namespace::model_mvmer>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_mvmer_namespace::model_mvmer>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/mvmer.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_mvmer_namespace::model_mvmer, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/mvmer.cc:3:
In file included from stan_files/mvmer.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
71 warnings generated.
"/home/hornik/tmp/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/polr.stan
Wrote C++ file "stan_files/polr.cc"


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c stan_files/polr.cc -o stan_files/polr.o
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:540:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:2:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/LU:47:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Jacobi:29:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Cholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Householder:27:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/QR:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SVD:48:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Geometry:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:22:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Eigenvalues:58:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:66:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/OrderingMethods:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCholesky:43:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:33:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseQR:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:3:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:33:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:32:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/CholmodSupport:45:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/Polynomials:135:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:44:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:239:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:14:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
    #pragma clang diagnostic pop
                             ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_cholesky_factor_corr.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_unit_vector.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/abs.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/hypot.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/apply_scalar_binary.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/check_matching_dims.hpp:33:8: warning: unused variable 'error' [-Wunused-variable]
  bool error = false;
       ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:12:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err.hpp:50:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/err/hmm_check.hpp:33:7: warning: unused variable 'n_transitions' [-Wunused-variable]
  int n_transitions = log_omegas.cols() - 1;
      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:118:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/gp_matern52_cov.hpp:275:10: warning: unused variable 'neg_root_5' [-Wunused-variable]
  double neg_root_5 = -root_5;
         ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:183:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/log_mix.hpp:86:13: warning: unused variable 'N' [-Wunused-variable]
  const int N = stan::math::size(theta);
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:35:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimension.hpp:21:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/dimension_list.hpp:131:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:39:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/linear_algebra.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:40:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/unscale.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:20:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/conversion.hpp:17:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/detail/conversion_impl.hpp:21:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint.hpp:25:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token]
#include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP()
         ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include/boost/typeof/typeof.hpp:197:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP'
     <boost/typeof/incr_registration_group.hpp>
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:87:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_cdf.hpp:82:10: warning: unused variable 'N' [-Wunused-variable]
  size_t N = max_size(y, mu, sigma);
         ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:128:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gaussian_dlm_obs_rng.hpp:98:7: warning: unused variable 'n' [-Wunused-variable]
  int n = G.rows();  // number of states
      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:139:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/hmm_marginal.hpp:26:13: warning: unused variable 'n_states' [-Wunused-variable]
  const int n_states = omegas.rows();
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:315:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/std_normal_rng.hpp:23:22: warning: unused variable 'function' [-Wunused-variable]
  static const char* function = "std_normal_rng";
                     ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:335:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/von_mises_cdf.hpp:72:10: warning: unused variable 'ck' [-Wunused-variable]
  double ck = 50;
         ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
    int ret = stan::services::error_codes::CONFIG;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:9:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue.hpp:610:13: warning: unused variable 'cols' [-Wunused-variable]
  const int cols = rvalue_index_size(idxs.tail_.head_, x_ref.cols());
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:10:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/rvalue_varmat.hpp:241:22: warning: unused variable 'x_cols' [-Wunused-variable]
  const Eigen::Index x_cols = x.cols();
                     ^
In file included from stan_files/polr.cc:3:
stan_files/polr.hpp:632:9: warning: variable 'iter' set but not used [-Wunused-but-set-variable]
    int iter;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:88:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_minus_equal.hpp:24:16: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
  vi_ = (*this - b).vi_;
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/complex_base.hpp:136:9: note: in instantiation of member function 'stan::math::var_value<double>::operator-=' requested here
    re_ -= x;
        ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:24:5: note: in instantiation of function template specialization 'stan::math::complex_base<stan::math::var_value<double>>::operator-=<int>' requested here
  y -= rhs;
    ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/core/operator_subtraction.hpp:55:20: note: in instantiation of function template specialization 'stan::math::internal::complex_subtract<std::complex<stan::math::var>, int>' requested here
  return internal::complex_subtract(x, y);
                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/acosh.hpp:105:31: note: in instantiation of function template specialization 'stan::math::operator-<stan::math::var_value<double>, int>' requested here
  auto y = log(z + sqrt(z * z - 1));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/acosh.hpp:94:32: note: in instantiation of function template specialization 'stan::math::internal::complex_acosh<stan::math::var_value<double>>' requested here
  return stan::math::internal::complex_acosh(z);
                               ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/grad_inc_beta.hpp:45:43: note: in instantiation of function template specialization 'stan::math::operator+<int, nullptr>' requested here
    grad_2F1(dF1, dF2, a + b, var(1.0), a + 1, z);
                                          ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:28:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_addition.hpp:84:43: warning: lambda capture 'b' is not used [-Wunused-lambda-capture]
                            [avi = a.vi_, b](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/trigamma.hpp:63:31: note: in instantiation of function template specialization 'stan::math::operator+<double, nullptr>' requested here
    value = -trigamma_impl(-x + 1.0) + square(pi() / sin(-pi() * x));
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/trigamma.hpp:23:44: note: in instantiation of function template specialization 'stan::math::trigamma_impl<stan::math::var_value<double>>' requested here
inline var trigamma(const var& u) { return trigamma_impl(u); }
                                           ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/lub_constrain.hpp:115:24: note: in instantiation of function template specialization 'stan::math::operator-<double, nullptr>' requested here
    lp += log(ub - lb) - x - 2 * log1p(exp_minus_x);
                       ^
stan_files/polr.hpp:1487:26: note: in instantiation of function template specialization 'stan::math::lub_constrain<stan::math::var_value<double>, int, int, stan::math::var_value<double>>' requested here
        R2 = stan::math::lub_constrain(R2, (logical_gt(K, 1) ? 0 : -1), 1,
                         ^
stan_files/polr.hpp:2268:14: note: in instantiation of function template specialization 'model_polr_namespace::model_polr::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_polr_namespace::model_polr::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_polr_namespace::model_polr>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_polr_namespace::model_polr>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/polr.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:29:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_divide_equal.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_division.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_multiplication.hpp:7:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/operator_subtraction.hpp:113:43: warning: lambda capture 'a' is not used [-Wunused-lambda-capture]
                            [bvi = b.vi_, a](const auto& vi) mutable {
                                          ^
stan_files/polr.hpp:1530:33: note: in instantiation of function template specialization 'stan::math::operator-<int, nullptr>' requested here
          Delta_y = inv_sqrt((1 - R2));
                                ^
stan_files/polr.hpp:2268:14: note: in instantiation of function template specialization 'model_polr_namespace::model_polr::log_prob_impl<true, true, std::vector<stan::math::var_value<double>>, std::vector<int>, nullptr, nullptr>' requested here
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:40:36: note: in instantiation of function template specialization 'model_polr_namespace::model_polr::log_prob<true, true, stan::math::var_value<double>>' requested here
    var adLogProb = model.template log_prob<propto, jacobian_adjust_transform>(
                                   ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_polr_namespace::model_polr>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_polr_namespace::model_polr>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/polr.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:83:59: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_operands_(index_apply<N_containers>([&, this](auto... Is) {
                                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/functor/operands_and_partials.hpp:167:16: note: in instantiation of function template specialization 'stan::math::precomputed_gradients_vari_template<>::precomputed_gradients_vari_template<>' requested here
    return new precomputed_gradients_vari_template<
               ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/gumbel_cdf.hpp:108:23: note: in instantiation of member function 'stan::math::operands_and_partials<const stan::math::var_value<double> &, const int &, const int &, double, double, stan::math::var_value<double>>::build' requested here
  return ops_partials.build(cdf);
                      ^
stan_files/polr.hpp:357:18: note: in instantiation of function template specialization 'stan::math::gumbel_cdf<stan::math::var_value<double>, int, int>' requested here
          return gumbel_cdf(x, 0, 1);
                 ^
stan_files/polr.hpp:444:13: note: in instantiation of function template specialization 'model_polr_namespace::CDF_polr<stan::math::var_value<double>>' requested here
            CDF_polr((cutpoints[(1 - 1)] - eta[(n - 1)]), link, pstream__),
            ^
stan_files/polr.hpp:1594:30: note: in instantiation of function template specialization 'model_polr_namespace::pw_polr<Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, Eigen::Matrix<stan::math::var_value<double>, -1, 1, 0>, double>' requested here
              lp_accum__.add(pw_polr(y, eta, cutpoints, link, 1.0, pstream__));
                             ^
stan_files/polr.hpp:2268:14: note: (skipping 2 contexts in backtrace; use -ftemplate-backtrace-limit=0 to see all)
      return log_prob_impl<propto__, jacobian__>(params_r, params_i, pstream);
             ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/util/initialize.hpp:166:31: note: in instantiation of function template specialization 'stan::model::log_prob_grad<true, true, model_polr_namespace::model_polr>' requested here
      log_prob = stan::model::log_prob_grad<true, Jacobian>(
                              ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:49:43: note: in instantiation of function template specialization 'stan::services::util::initialize<true, model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
  std::vector<double> cont_vector = util::initialize(
                                          ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:481:45: note: in instantiation of function template specialization 'stan::services::diagnose::diagnose<model_polr_namespace::model_polr>' requested here
    return_code = stan::services::diagnose::diagnose(model,
                                            ^
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:1215:11: note: in instantiation of function template specialization 'rstan::(anonymous namespace)::command<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>' requested here
    ret = command(args, model_, holder, names_oi_tidx_,
          ^
stan_files/polr.cc:13:87: note: in instantiation of member function 'rstan::stan_fit<model_polr_namespace::model_polr, boost::random::additive_combine_engine<boost::random::linear_congruential_engine<unsigned int, 40014, 0, 2147483563>, boost::random::linear_congruential_engine<unsigned int, 40692, 0, 2147483399>>>::call_sampler' requested here
    .method("call_sampler", &rstan::stan_fit<stan_model, boost::random::ecuyer1988> ::call_sampler)
                                                                                      ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:52:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/precomputed_gradients.hpp:86:60: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
        container_gradients_(index_apply<N_containers>([&, this](auto... Is) {
                                                           ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:48:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_base.hpp:5:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core.hpp:59:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: 'static' function 'set_zero_all_adjoints' declared in header file should be declared 'static inline' [-Wunneeded-internal-declaration]
static void set_zero_all_adjoints() {
            ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:110:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/generalized_inverse.hpp:34:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<EigMat>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:14:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun.hpp:319:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/fun/tail.hpp:46:9: warning: unused type alias 'idx_t' [-Wunused-local-typedef]
  using idx_t = index_type_t<std::vector<T>>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/bernoulli_logit_glm_lpmf.hpp:59:9: warning: unused type alias 'T_y_val' [-Wunused-local-typedef]
  using T_y_val =
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:31:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_lpdf.hpp:50:9: warning: unused type alias 'T_partials_matrix' [-Wunused-local-typedef]
  using T_partials_matrix = Eigen::Matrix<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:37:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/beta_proportion_lpdf.hpp:55:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:63:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/cauchy_lpdf.hpp:45:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:74:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/dirichlet_lpdf.hpp:60:9: warning: unused type alias 'T_partials_vec' [-Wunused-local-typedef]
  using T_partials_vec = typename Eigen::Matrix<T_partials_return, -1, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:91:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/double_exponential_lpdf.hpp:44:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:111:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/frechet_cdf.hpp:30:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, Eigen::Dynamic, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:245:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/ordered_logistic_lpmf.hpp:76:9: warning: unused type alias 'T_partials_array' [-Wunused-local-typedef]
  using T_partials_array = Eigen::Array<T_partials_return, -1, 1>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:43:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/io/dump.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim.hpp:16:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob.hpp:277:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_log.hpp:5:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/prim/prob/poisson_log_glm_lpmf.hpp:62:9: warning: unused type alias 'T_alpha_val' [-Wunused-local-typedef]
  using T_alpha_val = typename std::conditional_t<
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:32:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_decompose.hpp:83:11: warning: unused type alias 'Block_' [-Wunused-local-typedef]
    using Block_ = Eigen::Block<Eigen::MatrixXd>;
          ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:34:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/cholesky_factor_constrain.hpp:32:9: warning: unused type alias 'T_scalar' [-Wunused-local-typedef]
  using T_scalar = value_type_t<T>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:18:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/rstaninc.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include/rstan/stan_fit.hpp:49:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:8:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev.hpp:10:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun.hpp:71:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/stan/math/rev/fun/generalized_inverse.hpp:64:9: warning: unused type alias 'value_t' [-Wunused-local-typedef]
  using value_t = value_type_t<VarMat>;
        ^
In file included from stan_files/polr.cc:3:
In file included from stan_files/polr.hpp:23:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/model_header.hpp:15:
In file included from /home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing.hpp:8:
/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src/stan/model/indexing/lvalue_varmat.hpp:349:9: warning: unused type alias 'pair_type' [-Wunused-local-typedef]
  using pair_type = std::pair<int, arena_vec>;
        ^
66 warnings generated.


clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/StanHeaders/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rstan/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS   -fpic  -g -O3 -Wall -pedantic -c init.cpp -o init.o
clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o rstanarm.so stan_files/bernoulli.o stan_files/binomial.o stan_files/continuous.o stan_files/count.o stan_files/jm.o stan_files/lm.o stan_files/mvmer.o stan_files/polr.o init.o -L/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/lib/ -Wl,-rpath,/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/lib/ -ltbb -ltbbmalloc -L/home/hornik/tmp/R/lib -lR
rm stan_files/polr.cc stan_files/mvmer.cc stan_files/count.cc stan_files/lm.cc stan_files/jm.cc stan_files/bernoulli.cc stan_files/binomial.cc stan_files/continuous.cc
installing to /srv/hornik/tmp/CRAN/rstanarm.Rcheck/00LOCK-rstanarm/00new/rstanarm/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rstanarm)