context("rpt") # Set a seed for reproducibility of the randomization suppressWarnings(RNGversion("3.5.0")) set.seed(23) # load data data(BeetlesBody) data(BeetlesMale) data(BeetlesFemale) # prepare proportion data BeetlesMale$Dark <- BeetlesMale$Colour BeetlesMale$Reddish <- (BeetlesMale$Colour-1)*-1 md <- aggregate(cbind(Dark, Reddish) ~ Population + Container, data=BeetlesMale, FUN=sum) test_that("wrapper function rpt works for all distributions without perm or boot and defaults", { expect_error(rpt(BodyL ~ (1|Population), grname="Population", data=BeetlesBody, nboot=0, npermut=0, datatype = "Gaussian"), NA) expect_error(rpt(Egg ~ Treatment + (1|Container), grname=c("Container"), data = BeetlesFemale, nboot=0, npermut=0, datatype = "Poisson"), NA) expect_error(rpt(Colour ~ (1|Population), grname=c("Population"), data=BeetlesMale, nboot=5, npermut=0, datatype = "Binary"), NA) expect_error(rpt(cbind(Dark, Reddish) ~ (1|Population), grname=c("Population"), data=md, nboot=0, npermut=0, datatype = "Proportion"), NA) }) test_that("wrapper function rpt works for all distributions with perm and boot and defaults", { expect_error(rpt(BodyL ~ (1|Population), grname="Population", data=BeetlesBody, nboot=2, npermut=2, datatype = "Gaussian"), NA) expect_error(rpt(Egg ~ Treatment + (1|Container), grname=c("Container"), data = BeetlesFemale, nboot=2, npermut=2, datatype = "Poisson"), NA) expect_error(rpt(Colour ~ (1|Population), grname=c("Population"), data=BeetlesMale, nboot=2, npermut=2, datatype = "Binary"), NA) expect_error(rpt(cbind(Dark, Reddish) ~ (1|Population), grname=c("Population"), data=md, nboot=2, npermut=2, datatype = "Proportion"), NA) })