Package: slendr
Check: tests
New result: ERROR
    Running ‘testthat.R’ [31s/31s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(slendr)
    The 'slim' binary could not be found in your $PATH. Most of
    the functionality of slendr will work without any issues but
    you will not be able to simulate data with the `slim()` function.
    
    If you want to run SLiM simulations, make sure to modify the $PATH
    variable so that it points to the directory containing the slim
    command-line program. One easy way to do this is to add this:
    
    PATH="path/to/directory/with/slim/binary"
    
    to your ~/.Renviron file.
    
    Alternatively, use the `slim_path` argument of the `slim()` function.
    --------------------
    A slendr Python (3.12) environment with the necessary versions of
    msprime (1.3.3), tskit (0.5.8), pyslim (1.0.4), and tspop (0.0.2)
    has not been found.
    
    You can setup a pre-configured environment with all of slendr's Python
    dependencies automatically by running the function `setup_env()`.
    > 
    > test_check("slendr")
    [ FAIL 1 | WARN 0 | SKIP 30 | PASS 145 ]
    
    ══ Skipped tests (30) ══════════════════════════════════════════════════════════
    • !is_slendr_env_present() is TRUE (29): 'test-compilation.R:69:1',
      'test-engines.R:1:1', 'test-extensions.R:1:1', 'test-future.R:15:1',
      'test-geneflow.R:50:3', 'test-ibd-squashing.R:1:1', 'test-ibd.R:1:1',
      'test-interaction-changes.R:3:1', 'test-manual-ts.R:1:1',
      'test-msprime-geneflow.R:5:1', 'test-msprime-metadata.R:1:1',
      'test-msprime.R:23:1', 'test-nonserialized.R:1:1', 'test-population.R:43:3',
      'test-population.R:60:3', 'test-population.R:142:3',
      'test-pure-msprime-vs-slendr.R:4:1', 'test-pure-slim-vs-slendr.R:4:1',
      'test-resizes-locked.R:1:1', 'test-resizes.R:1:1', 'test-runners.R:1:1',
      'test-sampling.R:3:1', 'test-simulation-runs.R:1:1',
      'test-time-direction.R:1:1', 'test-trees.R:1:1',
      'test-ts-ancestors-descendants.R:1:1', 'test-ts-pure-nonspatial.R:1:1',
      'test-ts.R:1:1', 'test-tspop.R:1:1'
    • !is_slendr_env_present() || !is_slim_present() is TRUE (1):
      'test-ts-pure-spatial.R:1:1'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-naturalearth.R:2:3'): all three variants of the Natural Earth data can be downloaded ──
    Error in `rnaturalearth::ne_load(scale = scale, type = "land", category = "physical", 
        returnclass = "sf", destdir = ne_dir)`: The file '/vsizip//vsicurl/https://naciscdn.org/naturalearth/110m/physical/ne_110m_land.zip' seems not to exist in your local folder '/home/hornik/tmp/scratch/RtmpUr9toU/naturalearth'. Did you download it using `rnaturalearth::ne_download()`?
    Backtrace:
        ▆
     1. ├─utils::capture.output(...) at test-naturalearth.R:2:3
     2. │ └─base::withVisible(...elt(i))
     3. └─slendr::world(xrange = c(-15, 40), yrange = c(30, 60), crs = "EPSG:3035")
     4.   ├─base::suppressWarnings(...)
     5.   │ └─base::withCallingHandlers(...)
     6.   └─rnaturalearth::ne_load(...)
     7.     └─cli::cli_abort(error_msg)
     8.       └─rlang::abort(...)
    
    [ FAIL 1 | WARN 0 | SKIP 30 | PASS 145 ]
    Error: Test failures
    Execution halted