context("mcfs") #devtools::use_testthat() #devtools::use_test("test.mcfs") test_that("read/write adx/adh", { skip_on_cran() options(java.parameters = "-Xmx4g") require(testthat) require(rmcfs) ####################################### ######### read/write to file ########## ####################################### # create input data and review it adata_size <- 30 adata_ref <- artificial.data(rnd_features = adata_size, seed = 1) attr(adata_ref, 'attr_weights') <- round(runif(ncol(adata_ref),min = 1, max = 5)) attr(adata_ref, 'target') <- 'class' attributes(adata_ref) showme(adata_ref) path <- tempdir() file_tmp <- file.path(path, "adx_file.adx") file_zip <- file.path(path, "adx_file.zip") write.adx(adata_ref, file = file_tmp, target = NA, zip = T) adata <- read.adx(file_zip) expect_true(all(dim(adata) == dim(adata_ref))) expect_true(all(names(adata) == names(adata_ref))) expect_true(all(attr(adata, 'attr_weights') == attr(adata_ref, 'attr_weights'))) expect_true(all(attr(adata, 'target') == attr(adata_ref, 'target'))) expect_true(all(round(adata[,1:adata_size], digits = 5) == round(adata_ref[,1:adata_size], digits = 5))) expect_true(all(adata[,(adata_size+1):(adata_size+5)] == adata_ref[,31:35])) file_tmp <- file.path(path, "adx_file.adh") file_zip <- file.path(path, "adx_file.zip") write.adh(adata_ref, file = file_tmp, target = NA, zip = T) adata <- read.adh(file_zip) expect_true(all(dim(adata) == dim(adata_ref))) expect_true(all(names(adata) == names(adata_ref))) expect_true(all(attr(adata, 'attr_weights') == attr(adata_ref, 'attr_weights'))) expect_true(all(attr(adata, 'target') == attr(adata_ref, 'target'))) expect_true(all(round(adata[,1:adata_size], digits = 5) == round(adata_ref[,1:adata_size], digits = 5))) expect_true(all(adata[,(adata_size+1):(adata_size+5)] == adata_ref[,31:35])) file_tmp <- file.path(path, "adx_file.arff") file_zip <- file.path(path, "adx_file.zip") write.arff(adata_ref, file = file_tmp, target = NA, zip = T) })