context("man.plot.idgraph") ################################################################## test_that("man build.idgraph", { options(java.parameters = "-Xmx4g") require(testthat) require(rmcfs) # create input data adata <- artificial.data(rnd_features = 10) showme(adata) # Parametrize and run MCFS-ID procedure result <- mcfs(class~., adata, cutoffPermutations = 0, featureFreq = 50, finalCV = FALSE, finalRuleset = FALSE, threadsNumber = 2) # build interdependencies graph for top 6 features # and top 12 interdependencies and plot all nodes gid <- build.idgraph(result, size = 6, size_ID = 12, orphan_nodes = TRUE) plot(gid, label_dist = 1) }) ##################################################################