## rmatio, a R interface to the C library matio, MAT File I/O Library. ## Copyright (C) 2013-2023 Stefan Widgren ## ## This program is free software: you can redistribute it and/or modify ## it under the terms of the GNU General Public License as published by ## the Free Software Foundation, either version 3 of the License, or ## (at your option) any later version. ## ## rmatio is distributed in the hope that it will be useful, ## but WITHOUT ANY WARRANTY; without even the implied warranty of ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ## GNU General Public License for more details. ## ## You should have received a copy of the GNU General Public License ## along with this program. If not, see . library(rmatio) library(Matrix) ## For debugging sessionInfo() ## ## Check write and read of dgCMatrix in MAT5 format: ## 1) without compression ## 2) with compression ## ## ## dgCMatrix: case-1 ## a1_exp <- Matrix(c(0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1), nrow = 3, ncol = 9, byrow = TRUE, sparse = TRUE) filename <- tempfile(fileext = ".mat") write.mat(list(a = a1_exp), filename = filename, compression = FALSE, version = "MAT5") a1_obs <- read.mat(filename)[["a"]] unlink(filename) str(a1_obs) stopifnot(identical(a1_obs, a1_exp)) ## Run the same test with compression filename <- tempfile(fileext = ".mat") write.mat(list(a = a1_exp), filename = filename, compression = TRUE, version = "MAT5") a1_zlib_obs <- read.mat(filename)[["a"]] unlink(filename) str(a1_zlib_obs) stopifnot(identical(a1_zlib_obs, a1_exp)) ## ## dgCMatrix: case-2 ## a2_exp <- as(diag(1:5), "dgCMatrix") filename <- tempfile(fileext = ".mat") write.mat(list(a = a2_exp), filename = filename, compression = FALSE, version = "MAT5") a2_obs <- read.mat(filename)[["a"]] unlink(filename) str(a2_obs) stopifnot(identical(a2_obs, a2_exp)) ## Run the same test with compression filename <- tempfile(fileext = ".mat") write.mat(list(a = a2_exp), filename = filename, compression = TRUE, version = "MAT5") a2_zlib_obs <- read.mat(filename)[["a"]] unlink(filename) str(a2_zlib_obs) stopifnot(identical(a2_zlib_obs, a2_exp))