* installing *source* package ‘rlibkriging’ ... ** using staged installation set CMAKE_BIN=/usr/bin/cmake set CC=clang-18 set FC=flang-new-18 set CFLAGS=-I/usr/local/include -fpic -g -O3 -Wall -pedantic set CXX=clang++-18 set CXXFLAGS=-std=gnu++17 -I/usr/local/include -fpic -g -O3 -Wall -pedantic set LDFLAGS=-Wl,-O1 travis-ci -- Color mode enabled fatal: not a git repository (or any of the parent directories): .git -- The C compiler identification is Clang 18.1.8 -- The CXX compiler identification is Clang 18.1.8 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang-18 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/clang++-18 - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at armadillo/CMakeLists.txt:31 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- *** set cmake policy CMP0025 to NEW -- CMAKE_CXX_STANDARD = 11 -- Configuring Armadillo 11.4.2 -- -- *** WARNING: variable 'CMAKE_CXX_FLAGS' is not empty; this may cause problems! -- -- Detected Clang 6.0 or later -- ARMA_USE_EXTERN_RNG = true -- CMAKE_SYSTEM_NAME = Linux -- CMAKE_CXX_COMPILER_ID = Clang -- CMAKE_CXX_COMPILER_VERSION = 18.1.8 -- CMAKE_COMPILER_IS_GNUCXX = -- -- *** Options: -- BUILD_SHARED_LIBS = off -- DETECT_HDF5 = false -- OPENBLAS_PROVIDES_LAPACK = OFF -- ALLOW_FLEXIBLAS_LINUX = ON -- ALLOW_OPENBLAS_MACOS = OFF -- ALLOW_BLAS_LAPACK_MACOS = OFF -- BUILD_SMOKE_TEST = OFF -- -- *** Looking for external libraries -- Found BLAS: /usr/lib/x86_64-linux-gnu/libblas.so -- Found LAPACK: /usr/lib/x86_64-linux-gnu/liblapack.so -- FlexiBLAS_FOUND = NO -- MKL_FOUND = NO -- OpenBLAS_FOUND = NO -- ATLAS_FOUND = NO -- BLAS_FOUND = YES -- LAPACK_FOUND = YES -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Found ARPACK: /usr/lib/x86_64-linux-gnu/libarpack.so -- ARPACK_FOUND = YES -- Looking for SuperLU version 5 -- Found SuperLU: /usr/lib/x86_64-linux-gnu/libsuperlu.so -- SuperLU_FOUND = YES -- SuperLU_INCLUDE_DIR = /usr/include/superlu -- -- *** Result of configuration: -- *** ARMA_USE_WRAPPER = true -- *** ARMA_USE_LAPACK = true -- *** ARMA_USE_BLAS = true -- *** ARMA_USE_ATLAS = false -- *** ARMA_USE_HDF5_CMAKE = false -- *** ARMA_USE_ARPACK = true -- *** ARMA_USE_EXTERN_RNG = true -- *** ARMA_USE_SUPERLU = true -- -- *** Armadillo wrapper library will use the following libraries: -- *** ARMA_LIBS = /usr/lib/x86_64-linux-gnu/libblas.so;/usr/lib/x86_64-linux-gnu/liblapack.so;/usr/lib/x86_64-linux-gnu/libarpack.so;/usr/lib/x86_64-linux-gnu/libsuperlu.so -- -- Copying /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/armadillo/include/ to /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/tmp/include/ -- Generating /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/tmp/include/config.hpp -- CMAKE_CXX_FLAGS = -g -O3 -Wall -pedantic -O2 -- CMAKE_SHARED_LINKER_FLAGS = -Wl,-O1 -Wl,--no-as-needed -- CMAKE_REQUIRED_INCLUDES = /usr/include/superlu -- -- CMAKE_INSTALL_PREFIX = /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed -- CMAKE_INSTALL_LIBDIR = lib -- CMAKE_INSTALL_INCLUDEDIR = include -- CMAKE_INSTALL_DATADIR = share -- CMAKE_INSTALL_BINDIR = bin -- Generating '/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/ArmadilloConfig.cmake' -- Generating '/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/ArmadilloConfigVersion.cmake' -- Generating '/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfig.cmake' -- Generating '/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/InstallFiles/ArmadilloConfigVersion.cmake' -- Copying /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/armadillo/misc/ to /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/tmp/misc/ -- Generating '/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/armadillo/tmp/misc/armadillo.pc' -- Build static library -- Static analysis not available. -- Octave binding available [v9.2.0] but disabled as requested. -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Could NOT find Matlab (missing: Matlab_INCLUDE_DIRS MAIN_PROGRAM) -- Matlab binding not available CMake Warning (dev) at CMakeLists.txt:475 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.6", minimum required is "3.7") -- Checking Python requirements ✔ Module numpy>=1.18,<2 is available ✔ Module pytest is available ✔ Module setuptools is available ✔ Module packaging is available ✔ Module wheel is available -- PYTHON binding available but disabled as requested. -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success CMake Warning at CMakeLists.txt:646 (message): clang-format no found; clang-format target is not available. CMake Warning at CMakeLists.txt:680 (message): doxygen no found; doc target is not available. -- Configuring done (1.8s) -- Generating done (0.0s) -- Build files have been written to: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build [ 3%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper1.cpp.o [ 6%] Building CXX object armadillo/CMakeFiles/armadillo.dir/src/wrapper2.cpp.o [ 10%] Linking CXX static library libarmadillo.a [ 10%] Built target armadillo [ 13%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/blas.c.o [ 17%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/lbfgsb.c.o /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:389:11: warning: unused variable 'o__1' [-Wunused-variable] 389 | olist o__1; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:499:19: warning: unused variable 'io___56' [-Wunused-variable] 499 | static cilist io___56 = { 0, 6, 0, fmt_1002, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:500:19: warning: unused variable 'io___57' [-Wunused-variable] 500 | static cilist io___57 = { 0, 0, 0, fmt_1003, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:501:19: warning: unused variable 'io___58' [-Wunused-variable] 501 | static cilist io___58 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:502:19: warning: unused variable 'io___60' [-Wunused-variable] 502 | static cilist io___60 = { 0, 6, 0, fmt_1005, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:503:19: warning: unused variable 'io___62' [-Wunused-variable] 503 | static cilist io___62 = { 0, 6, 0, fmt_1006, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:504:19: warning: unused variable 'io___63' [-Wunused-variable] 504 | static cilist io___63 = { 0, 6, 0, fmt_1005, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:505:19: warning: unused variable 'io___65' [-Wunused-variable] 505 | static cilist io___65 = { 0, 6, 0, fmt_1008, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:506:19: warning: unused variable 'io___69' [-Wunused-variable] 506 | static cilist io___69 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:507:19: warning: unused variable 'io___70' [-Wunused-variable] 507 | static cilist io___70 = { 0, 6, 0, fmt_1007, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1259:25: warning: variable 'nbdd' set but not used [-Wunused-but-set-variable] 1259 | static integer i__, nbdd; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1262:19: warning: unused variable 'io___75' [-Wunused-variable] 1262 | static cilist io___75 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1263:19: warning: unused variable 'io___76' [-Wunused-variable] 1263 | static cilist io___76 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1264:19: warning: unused variable 'io___77' [-Wunused-variable] 1264 | static cilist io___77 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1581:19: warning: unused variable 'io___82' [-Wunused-variable] 1581 | static cilist io___82 = { 0, 6, 0, 0, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1582:19: warning: unused variable 'io___90' [-Wunused-variable] 1582 | static cilist io___90 = { 0, 6, 0, fmt_3010, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1583:19: warning: unused variable 'io___99' [-Wunused-variable] 1583 | static cilist io___99 = { 0, 6, 0, fmt_1010, 0 }; | ^~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1584:19: warning: unused variable 'io___104' [-Wunused-variable] 1584 | static cilist io___104 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1585:19: warning: unused variable 'io___111' [-Wunused-variable] 1585 | static cilist io___111 = { 0, 6, 0, fmt_4011, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1586:19: warning: unused variable 'io___112' [-Wunused-variable] 1586 | static cilist io___112 = { 0, 6, 0, fmt_5010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1587:19: warning: unused variable 'io___113' [-Wunused-variable] 1587 | static cilist io___113 = { 0, 6, 0, fmt_6010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1588:19: warning: unused variable 'io___116' [-Wunused-variable] 1588 | static cilist io___116 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1589:19: warning: unused variable 'io___121' [-Wunused-variable] 1589 | static cilist io___121 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1590:19: warning: unused variable 'io___122' [-Wunused-variable] 1590 | static cilist io___122 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1591:19: warning: unused variable 'io___123' [-Wunused-variable] 1591 | static cilist io___123 = { 0, 6, 0, fmt_4010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1592:19: warning: unused variable 'io___124' [-Wunused-variable] 1592 | static cilist io___124 = { 0, 6, 0, fmt_6010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1593:19: warning: unused variable 'io___125' [-Wunused-variable] 1593 | static cilist io___125 = { 0, 6, 0, fmt_1010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:1594:19: warning: unused variable 'io___126' [-Wunused-variable] 1594 | static cilist io___126 = { 0, 6, 0, fmt_2010, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2809:19: warning: unused variable 'io___163' [-Wunused-variable] 2809 | static cilist io___163 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2810:19: warning: unused variable 'io___164' [-Wunused-variable] 2810 | static cilist io___164 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2811:19: warning: unused variable 'io___165' [-Wunused-variable] 2811 | static cilist io___165 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:2812:19: warning: unused variable 'io___167' [-Wunused-variable] 2812 | static cilist io___167 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3089:19: warning: unused variable 'io___178' [-Wunused-variable] 3089 | static cilist io___178 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3356:13: warning: unused variable 'i__1' [-Wunused-variable] 3356 | integer i__1; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3364:20: warning: unused variable 'i__' [-Wunused-variable] 3364 | static integer i__; | ^~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3367:19: warning: unused variable 'io___181' [-Wunused-variable] 3367 | static cilist io___181 = { 0, 6, 0, fmt_7001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3368:19: warning: unused variable 'io___182' [-Wunused-variable] 3368 | static cilist io___182 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3369:19: warning: unused variable 'io___183' [-Wunused-variable] 3369 | static cilist io___183 = { 0, 0, 0, fmt_2001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3370:19: warning: unused variable 'io___184' [-Wunused-variable] 3370 | static cilist io___184 = { 0, 0, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3371:19: warning: unused variable 'io___185' [-Wunused-variable] 3371 | static cilist io___185 = { 0, 0, 0, fmt_9001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3372:19: warning: unused variable 'io___186' [-Wunused-variable] 3372 | static cilist io___186 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3373:19: warning: unused variable 'io___188' [-Wunused-variable] 3373 | static cilist io___188 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3374:19: warning: unused variable 'io___189' [-Wunused-variable] 3374 | static cilist io___189 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3476:13: warning: unused variable 'i__1' [-Wunused-variable] 3476 | integer i__1; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:20: warning: unused variable 'i__' [-Wunused-variable] 3485 | static integer i__, imod; | ^~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3485:25: warning: variable 'imod' set but not used [-Wunused-but-set-variable] 3485 | static integer i__, imod; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3488:19: warning: unused variable 'io___190' [-Wunused-variable] 3488 | static cilist io___190 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3489:19: warning: unused variable 'io___191' [-Wunused-variable] 3489 | static cilist io___191 = { 0, 6, 0, fmt_2001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3490:19: warning: unused variable 'io___192' [-Wunused-variable] 3490 | static cilist io___192 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3491:19: warning: unused variable 'io___194' [-Wunused-variable] 3491 | static cilist io___194 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3492:19: warning: unused variable 'io___196' [-Wunused-variable] 3492 | static cilist io___196 = { 0, 6, 0, fmt_2001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3493:19: warning: unused variable 'io___197' [-Wunused-variable] 3493 | static cilist io___197 = { 0, 0, 0, fmt_3001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3654:13: warning: unused variable 'i__1' [-Wunused-variable] 3654 | integer i__1; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3662:20: warning: unused variable 'i__' [-Wunused-variable] 3662 | static integer i__; | ^~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3665:19: warning: unused variable 'io___198' [-Wunused-variable] 3665 | static cilist io___198 = { 0, 6, 0, fmt_3003, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3666:19: warning: unused variable 'io___199' [-Wunused-variable] 3666 | static cilist io___199 = { 0, 6, 0, fmt_3004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3667:19: warning: unused variable 'io___200' [-Wunused-variable] 3667 | static cilist io___200 = { 0, 6, 0, fmt_3005, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3668:19: warning: unused variable 'io___201' [-Wunused-variable] 3668 | static cilist io___201 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3669:19: warning: unused variable 'io___203' [-Wunused-variable] 3669 | static cilist io___203 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3670:19: warning: unused variable 'io___204' [-Wunused-variable] 3670 | static cilist io___204 = { 0, 6, 0, fmt_3009, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3671:19: warning: unused variable 'io___205' [-Wunused-variable] 3671 | static cilist io___205 = { 0, 6, 0, fmt_9011, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3672:19: warning: unused variable 'io___206' [-Wunused-variable] 3672 | static cilist io___206 = { 0, 6, 0, fmt_9012, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3673:19: warning: unused variable 'io___207' [-Wunused-variable] 3673 | static cilist io___207 = { 0, 6, 0, fmt_9013, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3674:19: warning: unused variable 'io___208' [-Wunused-variable] 3674 | static cilist io___208 = { 0, 6, 0, fmt_9014, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3675:19: warning: unused variable 'io___209' [-Wunused-variable] 3675 | static cilist io___209 = { 0, 6, 0, fmt_9015, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3676:19: warning: unused variable 'io___210' [-Wunused-variable] 3676 | static cilist io___210 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3677:19: warning: unused variable 'io___211' [-Wunused-variable] 3677 | static cilist io___211 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3678:19: warning: unused variable 'io___212' [-Wunused-variable] 3678 | static cilist io___212 = { 0, 6, 0, fmt_9018, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3679:19: warning: unused variable 'io___213' [-Wunused-variable] 3679 | static cilist io___213 = { 0, 6, 0, fmt_9019, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3680:19: warning: unused variable 'io___214' [-Wunused-variable] 3680 | static cilist io___214 = { 0, 6, 0, fmt_3007, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3681:19: warning: unused variable 'io___215' [-Wunused-variable] 3681 | static cilist io___215 = { 0, 6, 0, fmt_3008, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3682:19: warning: unused variable 'io___216' [-Wunused-variable] 3682 | static cilist io___216 = { 0, 0, 0, fmt_3002, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3683:19: warning: unused variable 'io___217' [-Wunused-variable] 3683 | static cilist io___217 = { 0, 0, 0, fmt_3009, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3684:19: warning: unused variable 'io___218' [-Wunused-variable] 3684 | static cilist io___218 = { 0, 0, 0, fmt_9011, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3685:19: warning: unused variable 'io___219' [-Wunused-variable] 3685 | static cilist io___219 = { 0, 0, 0, fmt_9012, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3686:19: warning: unused variable 'io___220' [-Wunused-variable] 3686 | static cilist io___220 = { 0, 0, 0, fmt_9013, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3687:19: warning: unused variable 'io___221' [-Wunused-variable] 3687 | static cilist io___221 = { 0, 0, 0, fmt_9014, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3688:19: warning: unused variable 'io___222' [-Wunused-variable] 3688 | static cilist io___222 = { 0, 0, 0, fmt_9015, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3689:19: warning: unused variable 'io___223' [-Wunused-variable] 3689 | static cilist io___223 = { 0, 0, 0, fmt_9018, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3690:19: warning: unused variable 'io___224' [-Wunused-variable] 3690 | static cilist io___224 = { 0, 0, 0, fmt_9019, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3691:19: warning: unused variable 'io___225' [-Wunused-variable] 3691 | static cilist io___225 = { 0, 0, 0, fmt_3008, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3986:19: warning: unused variable 'io___228' [-Wunused-variable] 3986 | static cilist io___228 = { 0, 6, 0, fmt_1001, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3987:19: warning: unused variable 'io___242' [-Wunused-variable] 3987 | static cilist io___242 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3988:19: warning: unused variable 'io___243' [-Wunused-variable] 3988 | static cilist io___243 = { 0, 6, 0, 0, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:3989:19: warning: unused variable 'io___246' [-Wunused-variable] 3989 | static cilist io___246 = { 0, 6, 0, fmt_1004, 0 }; | ^~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: warning: '&&' within '||' [-Wlogical-op-parentheses] 4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:16: note: place parentheses around the '&&' expression to silence this warning 4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin | ^ | ( ) /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:62: warning: '&&' within '||' [-Wlogical-op-parentheses] 4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin | ~~ ~~~~~~~^~~~~~~~~~~~~~~~ 4706 | <= *xtol * stmax) { | ~~~~~~~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:4705:62: note: place parentheses around the '&&' expression to silence this warning 4705 | if (brackt && (*stp <= stmin || *stp >= stmax) || brackt && stmax - stmin | ^ | ( 4706 | <= *xtol * stmax) { | | ) /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:23:16: warning: unused variable 'c__9' [-Wunused-variable] 23 | static integer c__9 = 9; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:25:16: warning: unused variable 'c__3' [-Wunused-variable] 25 | static integer c__3 = 3; | ^~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/lbfgsb_cpp/Lbfgsb.3.0/lbfgsb.c:26:16: warning: unused variable 'c__5' [-Wunused-variable] 26 | static integer c__5 = 5; | ^~~~ 90 warnings generated. [ 20%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/linpack.c.o [ 24%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_cmp.c.o [ 27%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/s_copy.c.o [ 31%] Building C object lbfgsb_cpp/CMakeFiles/lbfgsb_cpp.dir/Lbfgsb.3.0/timer.c.o [ 34%] Linking C static library liblbfgsb_cpp.a [ 34%] Built target lbfgsb_cpp [ 37%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoClass.cpp.o [ 41%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoFunction.cpp.o [ 44%] Building CXX object src/lib/CMakeFiles/Kriging.dir/demo/DemoArmadilloClass.cpp.o [ 48%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Trend.cpp.o [ 51%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Optim.cpp.o [ 55%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Random.cpp.o [ 58%] Building CXX object src/lib/CMakeFiles/Kriging.dir/LinearAlgebra.cpp.o [ 62%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Covariance.cpp.o [ 65%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Kriging.cpp.o /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:120:15: warning: unused variable 'd' [-Wunused-variable] 120 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:191:17: warning: unused variable 'p' [-Wunused-variable] 191 | arma::uword p = m_F.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:501:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 501 | return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2))); | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:501:26: note: remove std::move call here 501 | return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2))); | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:501:50: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 501 | return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2))); | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:501:50: note: remove std::move call here 501 | return std::make_tuple(std::move(yhat.col(0)), std::move(yhat.col(1) * std::sqrt(m_sigma2))); | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:497:10: warning: variable 'loo' set but not used [-Wunused-but-set-variable] 497 | double loo = -1; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1146:33: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare] 1146 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work. | ~ ^ ~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1311:33: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare] 1311 | for (arma::uword i = 0; i < multistart; i++) { // TODO: use some foreach/pragma to let OpenMP work. | ~ ^ ~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1553:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 1553 | std::move(arma::sqrt(ysd2_n)), | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1553:26: note: remove std::move call here 1553 | std::move(arma::sqrt(ysd2_n)), | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1556:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 1556 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1556:26: note: remove std::move call here 1556 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1718:15: warning: unused variable 'd' [-Wunused-variable] 1718 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/Kriging.cpp:1722:15: warning: unused variable 'n_on' [-Wunused-variable] 1722 | arma::uword n_on = n_o + n_n; | ^~~~ 11 warnings generated. [ 68%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NuggetKriging.cpp.o /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:123:15: warning: unused variable 'd' [-Wunused-variable] 123 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:904:31: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare] 904 | for (arma::uword i = 0; i < multistart; i++) { | ~ ^ ~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1243:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 1243 | std::move(arma::sqrt(ysd2_n)), | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1243:26: note: remove std::move call here 1243 | std::move(arma::sqrt(ysd2_n)), | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1246:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 1246 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1246:26: note: remove std::move call here 1246 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1408:15: warning: unused variable 'd' [-Wunused-variable] 1408 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NuggetKriging.cpp:1412:15: warning: unused variable 'n_on' [-Wunused-variable] 1412 | arma::uword n_on = n_o + n_n; | ^~~~ 6 warnings generated. [ 72%] Building CXX object src/lib/CMakeFiles/Kriging.dir/NoiseKriging.cpp.o /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:121:15: warning: unused variable 'd' [-Wunused-variable] 121 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: warning: '&&' within '||' [-Wlogical-op-parentheses] 605 | || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2) // we fastly converged to one bound | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:605:50: note: place parentheses around the '&&' expression to silence this warning 605 | || (sol_to_b < arma::datum::eps) && (result.num_iters <= 2) // we fastly converged to one bound | ^ | ( ) /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:516:31: warning: comparison of integers of different signs: 'arma::uword' (aka 'unsigned int') and 'int' [-Wsign-compare] 516 | for (arma::uword i = 0; i < multistart; i++) { | ~ ^ ~~~~~~~~~~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:826:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 826 | std::move(arma::sqrt(ysd2_n)), | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:826:26: note: remove std::move call here 826 | std::move(arma::sqrt(ysd2_n)), | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:829:26: warning: moving a temporary object prevents copy elision [-Wpessimizing-move] 829 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:829:26: note: remove std::move call here 829 | std::move(Dysd2_n / (2 * arma::sqrt(ysd2_n) * arma::mat(1, d, arma::fill::ones)))); | ^~~~~~~~~~ ~ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1000:15: warning: unused variable 'd' [-Wunused-variable] 1000 | arma::uword d = m_X.n_cols; | ^ /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/src/lib/NoiseKriging.cpp:1004:15: warning: unused variable 'n_on' [-Wunused-variable] 1004 | arma::uword n_on = n_o + n_n; | ^~~~ 7 warnings generated. [ 75%] Building CXX object src/lib/CMakeFiles/Kriging.dir/KrigingLoader.cpp.o [ 79%] Building CXX object src/lib/CMakeFiles/Kriging.dir/lkalloc.cpp.o [ 82%] Building CXX object src/lib/CMakeFiles/Kriging.dir/Bench.cpp.o [ 86%] Building CXX object src/lib/CMakeFiles/Kriging.dir/CacheFunction.cpp.o [ 89%] Building CXX object src/lib/CMakeFiles/Kriging.dir/utils/base64.cpp.o [ 93%] Building CXX object src/lib/CMakeFiles/Kriging.dir/utils/jsonutils.cpp.o [ 96%] Building CXX object src/lib/CMakeFiles/Kriging.dir/__/__/version.cpp.o [100%] Linking CXX static library libKriging.a [100%] Built target Kriging -- Install configuration: "Release" -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/spglue_minus_bones.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_mean_meat.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/diagview_bones.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/fn_wishrnd.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/spglue_max_meat.hpp -- Installing: 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/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_mvnrnd_bones.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/spop_strans_bones.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_affmul_meat.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/glue_cor_meat.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/SizeMat_bones.hpp -- Installing: /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/libK/build/installed/include/armadillo_bits/op_dot_bones.hpp -- Installing: 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You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. R> Rcpp::compileAttributes(pkgdir = '.', verbose = TRUE) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/kriging_binding.cpp: Rcpp::List new_Kriging(std::string kernel) Rcpp::List new_KrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) void kriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) Rcpp::List kriging_copy(Rcpp::List k) Rcpp::List kriging_model(Rcpp::List k) std::string kriging_summary(Rcpp::List k) Rcpp::List kriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat kriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool will_update = false) arma::mat kriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u) void kriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true) void kriging_save(Rcpp::List k, std::string filename) arma::mat kriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List kriging_logLikelihoodFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool return_hess = false, bool bench = false) double kriging_logLikelihood(Rcpp::List k) Rcpp::List kriging_leaveOneOutFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) Rcpp::List kriging_leaveOneOutVec(Rcpp::List k, arma::vec theta) double kriging_leaveOneOut(Rcpp::List k) Rcpp::List kriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) double kriging_logMargPost(Rcpp::List k) std::string kriging_kernel(Rcpp::List k) std::string kriging_optim(Rcpp::List k) std::string kriging_objective(Rcpp::List k) arma::mat kriging_X(Rcpp::List k) arma::vec kriging_centerX(Rcpp::List k) arma::vec kriging_scaleX(Rcpp::List k) arma::vec kriging_y(Rcpp::List k) double kriging_centerY(Rcpp::List k) double kriging_scaleY(Rcpp::List k) bool kriging_normalize(Rcpp::List k) std::string kriging_regmodel(Rcpp::List k) arma::mat kriging_F(Rcpp::List k) arma::mat kriging_T(Rcpp::List k) arma::mat kriging_M(Rcpp::List k) arma::vec kriging_z(Rcpp::List k) arma::vec kriging_beta(Rcpp::List k) bool kriging_is_beta_estim(Rcpp::List k) arma::vec kriging_theta(Rcpp::List k) bool kriging_is_theta_estim(Rcpp::List k) double kriging_sigma2(Rcpp::List k) bool kriging_is_sigma2_estim(Rcpp::List k) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/linalg.cpp: double linalg_get_num_nugget() void linalg_set_num_nugget(double nugget) void linalg_check_chol_rcond(bool cr) bool linalg_chol_rcond_checked() arma::mat linalg_chol_safe(arma::mat X) void linalg_set_chol_warning(bool warn) double linalg_rcond_approx_chol(arma::mat X) double linalg_rcond_chol(arma::mat X) arma::mat linalg_chol_block(arma::mat C, arma::mat Loo) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/load.cpp: Rcpp::List kriging_load(std::string filename) Rcpp::List noisekriging_load(std::string filename) Rcpp::List nuggetkriging_load(std::string filename) std::string class_saved(std::string filename) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/noisekriging_binding.cpp: Rcpp::List new_NoiseKriging(std::string kernel) Rcpp::List new_NoiseKrigingFit(arma::vec y, arma::vec noise, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) void noisekriging_fit(Rcpp::List k, arma::vec y, arma::vec noise, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) Rcpp::List noisekriging_copy(Rcpp::List k) Rcpp::List noisekriging_model(Rcpp::List k) std::string noisekriging_summary(Rcpp::List k) Rcpp::List noisekriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat noisekriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, arma::vec with_noise, bool will_update = false) arma::mat noisekriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u) void noisekriging_update(Rcpp::List k, arma::vec y_u, arma::vec noise_u, arma::mat X_u, bool refit = true) void noisekriging_save(Rcpp::List k, std::string filename) arma::mat noisekriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List noisekriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_sigma2, bool return_grad = false, bool bench = false) double noisekriging_logLikelihood(Rcpp::List k) std::string noisekriging_kernel(Rcpp::List k) std::string noisekriging_optim(Rcpp::List k) std::string noisekriging_objective(Rcpp::List k) arma::mat noisekriging_X(Rcpp::List k) arma::vec noisekriging_centerX(Rcpp::List k) arma::vec noisekriging_scaleX(Rcpp::List k) arma::vec noisekriging_y(Rcpp::List k) arma::vec noisekriging_noise(Rcpp::List k) double noisekriging_centerY(Rcpp::List k) double noisekriging_scaleY(Rcpp::List k) bool noisekriging_normalize(Rcpp::List k) std::string noisekriging_regmodel(Rcpp::List k) arma::mat noisekriging_F(Rcpp::List k) arma::mat noisekriging_T(Rcpp::List k) arma::mat noisekriging_M(Rcpp::List k) arma::vec noisekriging_z(Rcpp::List k) arma::vec noisekriging_beta(Rcpp::List k) bool noisekriging_is_beta_estim(Rcpp::List k) arma::vec noisekriging_theta(Rcpp::List k) bool noisekriging_is_theta_estim(Rcpp::List k) double noisekriging_sigma2(Rcpp::List k) bool noisekriging_is_sigma2_estim(Rcpp::List k) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/nuggetkriging_binding.cpp: Rcpp::List new_NuggetKriging(std::string kernel) Rcpp::List new_NuggetKrigingFit(arma::vec y, arma::mat X, std::string kernel, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) void nuggetkriging_fit(Rcpp::List k, arma::vec y, arma::mat X, std::string regmodel = "constant", bool normalize = false, std::string optim = "BFGS", std::string objective = "LL", Rcpp::Nullable parameters = R_NilValue) Rcpp::List nuggetkriging_copy(Rcpp::List k) Rcpp::List nuggetkriging_model(Rcpp::List k) std::string nuggetkriging_summary(Rcpp::List k) Rcpp::List nuggetkriging_predict(Rcpp::List k, arma::mat X_n, bool return_stdev = true, bool return_cov = false, bool return_deriv = false) arma::mat nuggetkriging_simulate(Rcpp::List k, int nsim, int seed, arma::mat X_n, bool with_nugget = true, bool will_update = false) arma::mat nuggetkriging_update_simulate(Rcpp::List k, arma::vec y_u, arma::mat X_u) void nuggetkriging_update(Rcpp::List k, arma::vec y_u, arma::mat X_u, bool refit = true) void nuggetkriging_save(Rcpp::List k, std::string filename) arma::mat nuggetkriging_covMat(Rcpp::List k, arma::mat X1, arma::mat X2) Rcpp::List nuggetkriging_logLikelihoodFun(Rcpp::List k, arma::vec theta_alpha, bool return_grad = false, bool bench = false) double nuggetkriging_logLikelihood(Rcpp::List k) Rcpp::List nuggetkriging_logMargPostFun(Rcpp::List k, arma::vec theta, bool return_grad = false, bool bench = false) double nuggetkriging_logMargPost(Rcpp::List k) std::string nuggetkriging_kernel(Rcpp::List k) std::string nuggetkriging_optim(Rcpp::List k) std::string nuggetkriging_objective(Rcpp::List k) arma::mat nuggetkriging_X(Rcpp::List k) arma::vec nuggetkriging_centerX(Rcpp::List k) arma::vec nuggetkriging_scaleX(Rcpp::List k) arma::vec nuggetkriging_y(Rcpp::List k) double nuggetkriging_centerY(Rcpp::List k) double nuggetkriging_scaleY(Rcpp::List k) bool nuggetkriging_normalize(Rcpp::List k) std::string nuggetkriging_regmodel(Rcpp::List k) arma::mat nuggetkriging_F(Rcpp::List k) arma::mat nuggetkriging_T(Rcpp::List k) arma::mat nuggetkriging_M(Rcpp::List k) arma::vec nuggetkriging_z(Rcpp::List k) arma::vec nuggetkriging_beta(Rcpp::List k) bool nuggetkriging_is_beta_estim(Rcpp::List k) arma::vec nuggetkriging_theta(Rcpp::List k) bool nuggetkriging_is_theta_estim(Rcpp::List k) double nuggetkriging_sigma2(Rcpp::List k) bool nuggetkriging_is_sigma2_estim(Rcpp::List k) double nuggetkriging_nugget(Rcpp::List k) bool nuggetkriging_is_nugget_estim(Rcpp::List k) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/optim.cpp: bool optim_is_reparametrized() void optim_use_reparametrize(bool reparametrize) double optim_get_theta_lower_factor() void optim_set_theta_lower_factor(double theta_lower_factor) double optim_get_theta_upper_factor() void optim_set_theta_upper_factor(double theta_upper_factor) bool optim_variogram_bounds_heuristic_used() void optim_use_variogram_bounds_heuristic(bool variogram_bounds_heuristic) void optim_log(int l) int optim_get_max_iteration() void optim_set_max_iteration(int max_iteration) double optim_get_gradient_tolerance() void optim_set_gradient_tolerance(double gradient_tolerance) double optim_get_objective_rel_tolerance() void optim_set_objective_rel_tolerance(double objective_rel_tolerance) Exports from /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/random.cpp: void random_reset_seed(unsigned int seed) double random_randu() arma::vec random_randu_vec(unsigned int n) arma::mat random_randu_mat(unsigned int n, unsigned int d) arma::mat random_randn_mat(unsigned int n, unsigned int d) /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/R/RcppExports.R updated. R> ** libs using C++ compiler: ‘Debian clang version 18.1.8 (11)’ using C++17 clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c kriging_binding.cpp -o kriging_binding.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c linalg.cpp -o linalg.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c load.cpp -o load.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c noisekriging_binding.cpp -o noisekriging_binding.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c nuggetkriging_binding.cpp -o nuggetkriging_binding.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c optim.cpp -o optim.o clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-18/include" -DNDEBUG -I"/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst/"/include -include "libKriging/utils/lkalloc.hpp" -DARMA_ALIEN_MEM_ALLOC_FUNCTION=lkalloc::malloc -DARMA_ALIEN_MEM_FREE_FUNCTION=lkalloc::free -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DSTRICT_R_HEADERS=1 -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c random.cpp -o random.o clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-18/lib -Wl,-O1 -o rlibkriging.so RcppExports.o kriging_binding.o linalg.o load.o noisekriging_binding.o nuggetkriging_binding.o optim.o random.o -L/srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00_pkg_src/rlibkriging/src/../inst//lib -lKriging -larmadillo -llbfgsb_cpp /usr/lib/x86_64-linux-gnu/libblas.so /usr/lib/x86_64-linux-gnu/liblapack.so /usr/lib/x86_64-linux-gnu/libarpack.so /usr/lib/x86_64-linux-gnu/libsuperlu.so -llapack -L/home/hornik/tmp/R-d-clang-18/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-18/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/rlibkriging.Rcheck/00LOCK-rlibkriging/00new/rlibkriging/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlibkriging)