downloading reverse dependencies ... downloading AdverseEvents_0.0.4.tar.gz ... ok downloading allMT_0.1.0.tar.gz ... ok downloading boxr_0.3.7.tar.gz ... ok downloading bruceR_2025.8.tar.gz ... ok downloading childfree_0.0.4.tar.gz ... ok downloading cloudstoR_0.2.0.tar.gz ... ok downloading datamods_1.5.3.tar.gz ... ok downloading dataquieR_2.5.1.tar.gz ... ok downloading DistPlotter_0.0.2.tar.gz ... ok downloading editData_0.1.8.tar.gz ... ok downloading epiCleanr_0.2.0.tar.gz ... ok downloading estadistica_0.2.3.tar.gz ... ok downloading ExPanDaR_0.5.3.tar.gz ... ok downloading framecleaner_0.2.1.tar.gz ... ok downloading genogeographer_0.1.19.tar.gz ... ok downloading gesisdata_0.1.2.tar.gz ... ok downloading heterogen_1.2.33.tar.gz ... ok downloading IGoRRR_0.3.4.tar.gz ... ok downloading importinegi_1.2.1.tar.gz ... ok downloading ISRaD_2.5.5.tar.gz ... ok downloading lehuynh_0.1.1.tar.gz ... ok downloading metaConvert_1.0.3.tar.gz ... ok downloading mmstat4_0.2.1.tar.gz ... ok downloading NormalityAssessment_0.1.1.tar.gz ... ok downloading octopus_0.4.2.tar.gz ... ok downloading pewdata_0.3.2.tar.gz ... ok downloading PRISMA2020_1.1.1.tar.gz ... ok downloading ropercenter_0.3.2.tar.gz ... ok downloading rUM_2.2.0.tar.gz ... ok downloading StatTeacherAssistant_0.0.3.tar.gz ... ok downloading sysAgNPs_1.0.0.tar.gz ... ok downloading tfrmtbuilder_0.1.0.tar.gz ... ok downloading welo_0.1.4.tar.gz ... ok downloading car_3.1-3.tar.gz ... ok downloading codebook_0.9.6.tar.gz ... ok downloading datawizard_1.2.0.tar.gz ... ok downloading esquisse_2.1.0.tar.gz ... ok downloading eventglm_1.4.5.tar.gz ... ok downloading genekitr_1.2.8.tar.gz ... ok downloading Hmisc_5.2-3.tar.gz ... ok downloading ledger_2.0.11.tar.gz ... ok downloading metaconfoundr_0.1.2.tar.gz ... ok downloading multid_1.0.2.tar.gz ... ok downloading oceanis_1.8.5.tar.gz ... ok downloading pcutils_0.2.8.tar.gz ... ok downloading rosetta_0.3.12.tar.gz ... ok downloading sampleVADIR_1.0.0.tar.gz ... ok downloading text_1.7.0.tar.gz ... ok downloading ufs_25.7.1.tar.gz ... ok installing dependencies ‘acepack’, ‘alr4’, ‘bootES’, ‘careless’, ‘compareDF’, ‘ComplexUpset’, ‘compute.es’, ‘datamods’, ‘dbx’, ‘esc’, ‘estimraw’, ‘eulerr’, ‘europepmc’, ‘feather’, ‘flexsiteboard’, ‘forcats’, ‘geneset’, ‘gghalves’, ‘ggvenn’, ‘ggVennDiagram’, ‘GOplot’, ‘hexView’, ‘hrbrthemes’, ‘htm2txt’, ‘interactions’, ‘likert’, ‘metaumbrella’, ‘MetaUtility’, ‘MultinomialCI’, ‘multiwayvcov’, ‘netstat’, ‘osfr’, ‘phia’, ‘phosphoricons’, ‘pzfx’, ‘qmrparser’, ‘qreport’, ‘qs2’, ‘r.proxy’, ‘rankICC’, ‘relaimpo’, ‘revtools’, ‘rio’, ‘rmatio’, ‘rmdpartials’, ‘rosetta’, ‘rrvgo’, ‘RSelenium’, ‘safer’, ‘sjstats’, ‘sparkline’, ‘spsUtil’, ‘tfrmt’, ‘toastui’, ‘topics’, ‘TOSTER’, ‘treemap’, ‘ufs’, ‘voronoiTreemap’, ‘webp’ Warning: package ‘hrbrthemes’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘binman’, ‘wdman’, ‘metaConvert’, ‘powerSurvEpi’, ‘polylabelr’, ‘ngram’, ‘textmineR’ begin installing package ‘binman’ begin installing package ‘powerSurvEpi’ begin installing package ‘polylabelr’ begin installing package ‘ngram’ begin installing package ‘textmineR’ begin installing package ‘hexView’ begin installing package ‘pzfx’ begin installing package ‘rmatio’ begin installing package ‘qs2’ begin installing package ‘forcats’ begin installing package ‘phia’ begin installing package ‘phosphoricons’ begin installing package ‘MultinomialCI’ begin installing package ‘qmrparser’ begin installing package ‘flexsiteboard’ begin installing package ‘ggvenn’ begin installing package ‘dbx’ begin installing package ‘rankICC’ begin installing package ‘feather’ begin installing package ‘spsUtil’ begin installing package ‘multiwayvcov’ begin installing package ‘netstat’ begin installing package ‘compareDF’ begin installing package ‘estimraw’ begin installing package ‘TOSTER’ begin installing package ‘esc’ begin installing package ‘compute.es’ begin installing package ‘MetaUtility’ * installing *source* package ‘netstat’ ... ** this is package ‘netstat’ version ‘0.1.2’ ** package ‘netstat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netstat) begin installing package ‘webp’ * installing *source* package ‘MultinomialCI’ ... ** this is package ‘MultinomialCI’ version ‘1.2’ ** package ‘MultinomialCI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultinomialCI) begin installing package ‘alr4’ * installing *source* package ‘pzfx’ ... ** this is package ‘pzfx’ version ‘0.3.0’ ** package ‘pzfx’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pzfx) begin installing package ‘rmdpartials’ * installing *source* package ‘flexsiteboard’ ... ** this is package ‘flexsiteboard’ version ‘0.0.7’ ** package ‘flexsiteboard’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flexsiteboard) begin installing package ‘likert’ * installing *source* package ‘hexView’ ... ** this is package ‘hexView’ version ‘0.3-4’ ** package ‘hexView’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hexView) begin installing package ‘europepmc’ * installing *source* package ‘dbx’ ... ** this is package ‘dbx’ version ‘0.4.0’ ** package ‘dbx’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dbx) begin installing package ‘geneset’ * installing *source* package ‘rankICC’ ... ** this is package ‘rankICC’ version ‘1.0.2’ ** package ‘rankICC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rankICC) begin installing package ‘ComplexUpset’ * installing *source* package ‘multiwayvcov’ ... ** this is package ‘multiwayvcov’ version ‘1.2.3’ ** package ‘multiwayvcov’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multiwayvcov) begin installing package ‘GOplot’ * installing *source* package ‘binman’ ... ** this is package ‘binman’ version ‘0.1.3’ ** package ‘binman’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (binman) begin installing package ‘treemap’ * installing *source* package ‘esc’ ... ** this is package ‘esc’ version ‘0.5.1’ ** package ‘esc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (esc) begin installing package ‘qreport’ * installing *source* package ‘qmrparser’ ... ** this is package ‘qmrparser’ version ‘0.1.6’ ** package ‘qmrparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qmrparser) * installing *source* package ‘phosphoricons’ ... ** this is package ‘phosphoricons’ version ‘0.2.1’ ** package ‘phosphoricons’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phosphoricons) begin installing package ‘acepack’ begin installing package ‘sparkline’ * installing *source* package ‘rmdpartials’ ... ** this is package ‘rmdpartials’ version ‘0.5.8’ ** package ‘rmdpartials’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdpartials) begin installing package ‘safer’ * installing *source* package ‘webp’ ... ** this is package ‘webp’ version ‘1.3.0’ ** package ‘webp’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/webp Using PKG_LIBS=-lwebp ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRdXLs0/R.INSTALL3b11407043f3fa/webp/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c webp.c -o webp.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o webp.so register.o webp.o -lwebp -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRdXLs0/R.INSTALL3b11407043f3fa/webp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-webp/00new/webp/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webp) begin installing package ‘htm2txt’ * installing *source* package ‘forcats’ ... ** this is package ‘forcats’ version ‘1.0.1’ ** package ‘forcats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forcats) begin installing package ‘gghalves’ * installing *source* package ‘estimraw’ ... ** this is package ‘estimraw’ version ‘1.0.0’ ** package ‘estimraw’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (estimraw) begin installing package ‘relaimpo’ * installing *source* package ‘spsUtil’ ... ** this is package ‘spsUtil’ version ‘0.2.2’ ** package ‘spsUtil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spsUtil) begin installing package ‘voronoiTreemap’ * installing *source* package ‘compareDF’ ... ** this is package ‘compareDF’ version ‘2.3.5’ ** package ‘compareDF’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compareDF) begin installing package ‘r.proxy’ * installing *source* package ‘compute.es’ ... ** this is package ‘compute.es’ version ‘0.2-5’ ** package ‘compute.es’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compute.es) begin installing package ‘sjstats’ * installing *source* package ‘ngram’ ... ** this is package ‘ngram’ version ‘3.2.3’ ** package ‘ngram’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphZS0Rl/R.INSTALL3b098c2d6c5fed/ngram/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c asweka.c -o asweka.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c babble.c -o babble.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c constructor.c -o constructor.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c converters.c -o converters.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c count.c -o count.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c getseed.c -o getseed.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram_native.c -o ngram_native.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c phrase_table.c -o phrase_table.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c print.c -o print.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/counts.c -o ngram/src/counts.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/gen.c -o ngram/src/gen.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/hash.c -o ngram/src/hash.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/lex.c -o ngram/src/lex.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/process.c -o ngram/src/process.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/wordcmp.c -o ngram/src/wordcmp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/rand/mt/rand_mt.c -o ngram/src/rand/mt/rand_mt.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/rand/mrg/rand_mrg.c -o ngram/src/rand/mrg/rand_mrg.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/rand/rng_interface.c -o ngram/src/rand/rng_interface.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DNEXTWORDS -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ngram/src/rand/samplers.c -o ngram/src/rand/samplers.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o ngram.so asweka.o babble.o constructor.o converters.o count.o getseed.o ngram_native.o phrase_table.o print.o ngram/src/counts.o ngram/src/gen.o ngram/src/hash.o ngram/src/lex.o ngram/src/process.o ngram/src/wordcmp.o ngram/src/rand/mt/rand_mt.o ngram/src/rand/mrg/rand_mrg.o ngram/src/rand/rng_interface.o ngram/src/rand/samplers.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphZS0Rl/R.INSTALL3b098c2d6c5fed/ngram/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ngram/00new/ngram/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ngram) * installing *source* package ‘sparkline’ ... ** this is package ‘sparkline’ version ‘2.0’ ** package ‘sparkline’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sparkline) begin installing package ‘osfr’ begin installing package ‘bootES’ * installing *source* package ‘safer’ ... ** this is package ‘safer’ version ‘0.2.1’ ** package ‘safer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (safer) begin installing package ‘careless’ * installing *source* package ‘htm2txt’ ... ** this is package ‘htm2txt’ version ‘2.2.2’ ** package ‘htm2txt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htm2txt) begin installing package ‘rio’ * installing *source* package ‘r.proxy’ ... ** this is package ‘r.proxy’ version ‘0.1.3’ ** package ‘r.proxy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (r.proxy) begin installing package ‘wdman’ * installing *source* package ‘ggvenn’ ... ** this is package ‘ggvenn’ version ‘0.1.10’ ** package ‘ggvenn’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggvenn) begin installing package ‘toastui’ * installing *source* package ‘powerSurvEpi’ ... ** this is package ‘powerSurvEpi’ version ‘0.1.5’ ** package ‘powerSurvEpi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (powerSurvEpi) begin installing package ‘tfrmt’ * installing *source* package ‘geneset’ ... ** this is package ‘geneset’ version ‘0.2.7’ ** package ‘geneset’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (geneset) begin installing package ‘ufs’ * installing *source* package ‘phia’ ... ** this is package ‘phia’ version ‘0.3-2’ ** package ‘phia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phia) begin installing package ‘ggVennDiagram’ * installing *source* package ‘europepmc’ ... ** this is package ‘europepmc’ version ‘0.4.3’ ** package ‘europepmc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (europepmc) begin installing package ‘revtools’ * installing *source* package ‘bootES’ ... ** this is package ‘bootES’ version ‘1.3.1’ ** package ‘bootES’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bootES) begin installing package ‘interactions’ * installing *source* package ‘careless’ ... ** this is package ‘careless’ version ‘1.2.2’ ** package ‘careless’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (careless) * installing *source* package ‘voronoiTreemap’ ... ** this is package ‘voronoiTreemap’ version ‘0.2.0’ ** package ‘voronoiTreemap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (voronoiTreemap) * installing *source* package ‘acepack’ ... ** this is package ‘acepack’ version ‘1.6.3’ ** package ‘acepack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaM8fgt/R.INSTALL3b151b38f84181/acepack/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c acedata.f90 -o acedata.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c acemod.f90 -o acemod.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c bakfit.f90 -o bakfit.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c calcmu.f90 -o calcmu.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c ctsub.f90 -o ctsub.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c favas.f90 -o favas.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c mace.f90 -o mace.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c model.f90 -o model.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c montne.f90 -o montne.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c rlsmo.f90 -o rlsmo.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c scail.f90 -o scail.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c smooth.f90 -o smooth.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c smothr.f90 -o smothr.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c sort.f90 -o sort.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c supersmoother.f90 -o supersmoother.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c supsmu.f90 -o supsmu.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o acepack.so acedata.o acemod.o bakfit.o calcmu.o ctsub.o favas.o init.o mace.o model.o montne.o rlsmo.o scail.o smooth.o smothr.o sort.o supersmoother.o supsmu.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaM8fgt/R.INSTALL3b151b38f84181/acepack/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-acepack/00new/acepack/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (acepack) * installing *source* package ‘wdman’ ... ** this is package ‘wdman’ version ‘0.2.6’ ** package ‘wdman’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wdman) begin installing package ‘RSelenium’ * installing *source* package ‘rio’ ... ** this is package ‘rio’ version ‘1.2.4’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rio) begin installing package ‘metaConvert’ * installing *source* package ‘polylabelr’ ... ** this is package ‘polylabelr’ version ‘0.3.0’ ** package ‘polylabelr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmponmhX9/R.INSTALL3b09a5d9d4049/polylabelr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c poi.cpp -o poi.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o polylabelr.so RcppExports.o poi.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmponmhX9/R.INSTALL3b09a5d9d4049/polylabelr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-polylabelr/00new/polylabelr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (polylabelr) begin installing package ‘eulerr’ * installing *source* package ‘gghalves’ ... ** this is package ‘gghalves’ version ‘0.1.4’ ** package ‘gghalves’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gghalves) * installing *source* package ‘sjstats’ ... ** this is package ‘sjstats’ version ‘0.19.1’ ** package ‘sjstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sjstats) * installing *source* package ‘GOplot’ ... ** this is package ‘GOplot’ version ‘1.0.2’ ** package ‘GOplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GOplot) * installing *source* package ‘osfr’ ... ** this is package ‘osfr’ version ‘0.2.9’ ** package ‘osfr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (osfr) * installing *source* package ‘likert’ ... ** this is package ‘likert’ version ‘1.3.5.1’ ** package ‘likert’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (likert) * installing *source* package ‘alr4’ ... ** this is package ‘alr4’ version ‘1.0.6’ ** package ‘alr4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alr4) * installing *source* package ‘MetaUtility’ ... ** this is package ‘MetaUtility’ version ‘2.1.2’ ** package ‘MetaUtility’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MetaUtility) * installing *source* package ‘RSelenium’ ... ** this is package ‘RSelenium’ version ‘1.7.9’ ** package ‘RSelenium’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RSelenium) * installing *source* package ‘treemap’ ... ** this is package ‘treemap’ version ‘2.4-4’ ** package ‘treemap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (treemap) begin installing package ‘rrvgo’ * installing *source* package ‘toastui’ ... ** this is package ‘toastui’ version ‘0.4.0’ ** package ‘toastui’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toastui) begin installing package ‘datamods’ * installing *source* package ‘ggVennDiagram’ ... ** this is package ‘ggVennDiagram’ version ‘1.5.4’ ** package ‘ggVennDiagram’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggVennDiagram) * installing *source* package ‘qreport’ ... ** this is package ‘qreport’ version ‘1.0-2’ ** package ‘qreport’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qreport) * installing *source* package ‘relaimpo’ ... ** this is package ‘relaimpo’ version ‘2.2-7’ ** package ‘relaimpo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (relaimpo) * installing *source* package ‘ComplexUpset’ ... ** this is package ‘ComplexUpset’ version ‘1.3.3’ ** package ‘ComplexUpset’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ComplexUpset) * installing *source* package ‘interactions’ ... ** this is package ‘interactions’ version ‘1.2.0’ ** package ‘interactions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (interactions) * installing *source* package ‘tfrmt’ ... ** this is package ‘tfrmt’ version ‘0.2.0’ ** package ‘tfrmt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tfrmt) * installing *source* package ‘revtools’ ... ** this is package ‘revtools’ version ‘0.4.1’ ** package ‘revtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (revtools) * installing *source* package ‘ufs’ ... ** this is package ‘ufs’ version ‘25.7.1’ ** package ‘ufs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ufs) begin installing package ‘rosetta’ * installing *source* package ‘metaConvert’ ... ** this is package ‘metaConvert’ version ‘1.0.3’ ** package ‘metaConvert’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaConvert) begin installing package ‘metaumbrella’ * installing *source* package ‘datamods’ ... ** this is package ‘datamods’ version ‘1.5.3’ ** package ‘datamods’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datamods) * installing *source* package ‘TOSTER’ ... ** this is package ‘TOSTER’ version ‘0.8.6’ ** package ‘TOSTER’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TOSTER) * installing *source* package ‘feather’ ... ** this is package ‘feather’ version ‘0.3.5’ ** package ‘feather’ successfully unpacked and MD5 sums checked ** using staged installation Platform is little endian. Good. ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFwZ9AW/R.INSTALL3b09eb374f402/feather/src' g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-read.cpp -o feather-read.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-types.cpp -o feather-types.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-write.cpp -o feather-write.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/buffer.cc -o feather/buffer.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/feather-c.cc -o feather/feather-c.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/io.cc -o feather/io.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/metadata.cc -o feather/metadata.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/reader.cc -o feather/reader.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/status.cc -o feather/status.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/types.cc -o feather/types.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/writer.cc -o feather/writer.o ar rcs libfeather.a feather/buffer.o feather/feather-c.o feather/io.o feather/metadata.o feather/reader.o feather/status.o feather/types.o feather/writer.o g++-15 -std=gnu++11 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o feather.so RcppExports.o feather-read.o feather-types.o feather-write.o -L. -lfeather -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFwZ9AW/R.INSTALL3b09eb374f402/feather/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-feather/00new/feather/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (feather) * installing *source* package ‘rosetta’ ... ** this is package ‘rosetta’ version ‘0.3.12’ ** package ‘rosetta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location Registered S3 methods overwritten by 'ufs': method from pander.crossTab rosetta pander.freq rosetta print.crossTab rosetta print.freq rosetta ** testing if installed package keeps a record of temporary installation path * DONE (rosetta) * installing *source* package ‘qs2’ ... ** this is package ‘qs2’ version ‘0.1.5’ ** package ‘qs2’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-15 -std=gnu++17 accepts -g... yes C++ compiler: g++-15 -std=gnu++17 zstd 1.5.7 library detected -- skipping zstd compilation Fixed blocksize Not using TBB configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpV7bwuQ/R.INSTALL3b09b64c0250e8/qs2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=0 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=0 -fpic -g -O2 -Wall -pedantic -mtune=native -c qx_functions.cpp -o qx_functions.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o qs2.so RcppExports.o qx_functions.o -L. -lzstd -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpV7bwuQ/R.INSTALL3b09b64c0250e8/qs2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-qs2/00new/qs2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qs2) * installing *source* package ‘rrvgo’ ... ** this is package ‘rrvgo’ version ‘1.20.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rrvgo) * installing *source* package ‘metaumbrella’ ... ** this is package ‘metaumbrella’ version ‘1.1.0’ ** package ‘metaumbrella’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaumbrella) * installing *source* package ‘rmatio’ ... ** this is package ‘rmatio’ version ‘0.19.0’ ** package ‘rmatio’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking inttypes.h... yes checking stdlib.h... yes checking stdint.h... yes checking strings.h... yes checking string.h... yes checking sys/stat.h... yes checking sys/types.h... yes checking unistd.h... checking for zlib... yes checking size of char... 1 checking size of short... 2 checking size of double... 8 checking size of float... 4 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of size_t... 8 checking size of void *... 8 checking for mat_int8_t... int8_t checking for mat_int16_t... int16_t checking for mat_int32_t... int32_t checking for mat_int64_t... int64_t checking for mat_uint8_t... uint8_t checking for mat_uint16_t... uint16_t checking for mat_uint32_t... uint32_t checking for mat_uint64_t... uint64_t configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/matio/config.h config.status: src/matio/config.h is unchanged ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwfU69z/R.INSTALL3b09ac4fd03eb0/rmatio/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/endian.c -o matio/endian.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/inflate.c -o matio/inflate.o matio/inflate.c: In function ‘InflateSkip’: matio/inflate.c:77:22: warning: storing the address of local variable ‘uncomp_buf’ in ‘*z.next_out’ [-Wdangling-pointer=] 77 | z->next_out = uncomp_buf; | ~~~~~~~~~~~~~^~~~~~~~~~~~ matio/inflate.c:51:31: note: ‘uncomp_buf’ declared here 51 | mat_uint8_t comp_buf[512],uncomp_buf[512]; | ^~~~~~~~~~ matio/inflate.c:49:35: note: ‘z’ declared here 49 | InflateSkip(mat_t *mat, z_streamp z, int nbytes) | ~~~~~~~~~~^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat4.c -o matio/mat4.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat5.c -o matio/mat5.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat.c -o matio/mat.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_cell.c -o matio/matvar_cell.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_struct.c -o matio/matvar_struct.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/read_data.c -o matio/read_data.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rmatio.c -o rmatio.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o rmatio.so matio/endian.o matio/inflate.o matio/mat4.o matio/mat5.o matio/mat.o matio/matvar_cell.o matio/matvar_struct.o matio/read_data.o rmatio.o -lz -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwfU69z/R.INSTALL3b09ac4fd03eb0/rmatio/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rmatio/00new/rmatio/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmatio) * installing *source* package ‘textmineR’ ... ** this is package ‘textmineR’ version ‘3.0.5’ ** package ‘textmineR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptYnHrs/R.INSTALL3b099c4faff7e2/textmineR/src' g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CalcLikelihoodC.cpp -o CalcLikelihoodC.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from CalcLikelihoodC.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CalcSumSquares.cpp -o CalcSumSquares.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from CalcSumSquares.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Dtm2DocsC.cpp -o Dtm2DocsC.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from Dtm2DocsC.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c HellingerMat.cpp -o HellingerMat.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Hellinger_cpp.cpp -o Hellinger_cpp.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c JSD_cpp.cpp -o JSD_cpp.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c JSDmat.cpp -o JSDmat.o g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lda_c_functions.cpp -o lda_c_functions.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:29, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadilloExtensions/fixprob.h:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadilloExtensions/sample.h:30, from lda_c_functions.cpp:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ 66 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.") | ^ g++-15 -std=gnu++11 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o textmineR.so CalcLikelihoodC.o CalcSumSquares.o Dtm2DocsC.o HellingerMat.o Hellinger_cpp.o JSD_cpp.o JSDmat.o RcppExports.o lda_c_functions.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptYnHrs/R.INSTALL3b099c4faff7e2/textmineR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-textmineR/00new/textmineR/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (textmineR) begin installing package ‘topics’ * installing *source* package ‘topics’ ... ** this is package ‘topics’ version ‘0.62’ ** package ‘topics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (topics) * installing *source* package ‘eulerr’ ... ** this is package ‘eulerr’ version ‘7.0.4’ ** package ‘eulerr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxxLn5l/R.INSTALL3b1d373ba26065/eulerr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c compute-areas.cpp -o compute-areas.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c conic.cpp -o conic.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ellipse.cpp -o ellipse.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c helpers.cpp -o helpers.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c intersections.cpp -o intersections.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c loss.cpp -o loss.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c optim_final.cpp -o optim_final.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c optim_init.cpp -o optim_init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c point.cpp -o point.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c solve_cubic.cpp -o solve_cubic.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o eulerr.so RcppExports.o compute-areas.o conic.o ellipse.o helpers.o intersections.o loss.o optim_final.o optim_init.o point.o solve_cubic.o utils.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxxLn5l/R.INSTALL3b1d373ba26065/eulerr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-eulerr/00new/eulerr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eulerr) checking rio_1.2.4.tar.gz ... checking AdverseEvents_0.0.4.tar.gz ... checking allMT_0.1.0.tar.gz ... checking boxr_0.3.7.tar.gz ... checking bruceR_2025.8.tar.gz ... checking childfree_0.0.4.tar.gz ... checking cloudstoR_0.2.0.tar.gz ... checking datamods_1.5.3.tar.gz ... checking dataquieR_2.5.1.tar.gz ... checking DistPlotter_0.0.2.tar.gz ... checking editData_0.1.8.tar.gz ... checking epiCleanr_0.2.0.tar.gz ... checking estadistica_0.2.3.tar.gz ... checking ExPanDaR_0.5.3.tar.gz ... checking framecleaner_0.2.1.tar.gz ... checking genogeographer_0.1.19.tar.gz ... checking gesisdata_0.1.2.tar.gz ... checking heterogen_1.2.33.tar.gz ... checking IGoRRR_0.3.4.tar.gz ... checking importinegi_1.2.1.tar.gz ... checking ISRaD_2.5.5.tar.gz ... checking lehuynh_0.1.1.tar.gz ... checking metaConvert_1.0.3.tar.gz ... checking mmstat4_0.2.1.tar.gz ... checking NormalityAssessment_0.1.1.tar.gz ... checking octopus_0.4.2.tar.gz ... checking pewdata_0.3.2.tar.gz ... checking PRISMA2020_1.1.1.tar.gz ... checking car_3.1-3.tar.gz ... checking sampleVADIR_1.0.0.tar.gz ... checking ufs_25.7.1.tar.gz ... checking welo_0.1.4.tar.gz ... checking metaconfoundr_0.1.2.tar.gz ... checking oceanis_1.8.5.tar.gz ... checking eventglm_1.4.5.tar.gz ... checking esquisse_2.1.0.tar.gz ... checking sysAgNPs_1.0.0.tar.gz ... checking multid_1.0.2.tar.gz ... checking genekitr_1.2.8.tar.gz ... checking codebook_0.9.6.tar.gz ... checking ropercenter_0.3.2.tar.gz ... checking ledger_2.0.11.tar.gz ... checking rosetta_0.3.12.tar.gz ... checking Hmisc_5.2-3.tar.gz ... checking StatTeacherAssistant_0.0.3.tar.gz ... checking rUM_2.2.0.tar.gz ... checking tfrmtbuilder_0.1.0.tar.gz ... checking pcutils_0.2.8.tar.gz ... checking text_1.7.0.tar.gz ... checking datawizard_1.2.0.tar.gz ... Depends: Package: rio Depends: R (>= 4.0) Imports: tools, stats, utils, foreign, haven (>= 1.1.2), curl (>= 0.6), data.table (>= 1.11.2), readxl (>= 0.1.1), tibble, writexl, lifecycle, R.utils, readr Timings: user system elapsed rio 68 7.299 79.776 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 8 41 Check results summary: rio ... OK rdepends_AdverseEvents ... OK rdepends_allMT ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_boxr ... OK rdepends_bruceR ... OK rdepends_car ... OK rdepends_childfree ... OK rdepends_cloudstoR ... OK rdepends_codebook ... OK rdepends_datamods ... OK rdepends_dataquieR ... OK rdepends_datawizard ... OK rdepends_DistPlotter ... OK rdepends_editData ... OK rdepends_epiCleanr ... NOTE * checking DESCRIPTION meta-information ... NOTE * checking Rd cross-references ... NOTE rdepends_esquisse ... OK rdepends_estadistica ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_eventglm ... OK rdepends_ExPanDaR ... OK rdepends_framecleaner ... OK rdepends_genekitr ... OK rdepends_genogeographer ... OK rdepends_gesisdata ... OK rdepends_heterogen ... OK rdepends_Hmisc ... NOTE * checking R code for possible problems ... [69s/69s] NOTE rdepends_IGoRRR ... OK rdepends_importinegi ... OK rdepends_ISRaD ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_ledger ... OK rdepends_lehuynh ... OK rdepends_metaconfoundr ... OK rdepends_metaConvert ... OK rdepends_mmstat4 ... OK rdepends_multid ... OK rdepends_NormalityAssessment ... OK rdepends_oceanis ... OK rdepends_octopus ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_pcutils ... OK rdepends_pewdata ... OK rdepends_PRISMA2020 ... OK rdepends_ropercenter ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_rosetta ... NOTE * checking Rd cross-references ... NOTE rdepends_rUM ... OK rdepends_sampleVADIR ... OK rdepends_StatTeacherAssistant ... OK rdepends_sysAgNPs ... OK rdepends_text ... OK rdepends_tfrmtbuilder ... OK rdepends_ufs ... OK rdepends_welo ... OK Check results changes: Package: DistPlotter Check: CRAN incoming feasibility Old result: NOTE Package: genogeographer Check: CRAN incoming feasibility Old result: NOTE Package: IGoRRR Check: CRAN incoming feasibility Old result: NOTE