downloading reverse dependencies ... downloading allMT_0.1.0.tar.gz ... ok downloading boxr_0.3.6.tar.gz ... ok downloading bruceR_2024.6.tar.gz ... ok downloading childfree_0.0.3.tar.gz ... ok downloading cloudstoR_0.2.0.tar.gz ... ok downloading datamods_1.5.2.tar.gz ... ok downloading dataquieR_2.1.0.tar.gz ... ok downloading DistPlotter_0.0.2.tar.gz ... ok downloading dpmr_0.1.9.tar.gz ... ok downloading editData_0.1.8.tar.gz ... ok downloading epiCleanr_0.2.0.tar.gz ... ok downloading estadistica_0.2.3.tar.gz ... ok downloading ExPanDaR_0.5.3.tar.gz ... ok downloading framecleaner_0.2.1.tar.gz ... ok downloading genogeographer_0.1.19.tar.gz ... ok downloading gesisdata_0.1.2.tar.gz ... ok downloading heterogen_1.2.33.tar.gz ... ok downloading IGoRRR_0.3.4.tar.gz ... ok downloading importinegi_1.2.1.tar.gz ... ok downloading ISRaD_2.5.5.tar.gz ... ok downloading kibior_0.1.1.tar.gz ... ok downloading lehuynh_0.1.1.tar.gz ... ok downloading metaConvert_1.0.0.tar.gz ... ok downloading mmstat4_0.2.1.tar.gz ... ok downloading NormalityAssessment_0.1.0.tar.gz ... ok downloading normfluodbf_1.5.2.tar.gz ... ok downloading octopus_0.4.2.tar.gz ... ok downloading pewdata_0.3.2.tar.gz ... ok downloading PRISMA2020_1.1.1.tar.gz ... ok downloading psData_0.2.2.tar.gz ... ok downloading ropercenter_0.3.2.tar.gz ... ok downloading rUM_2.0.0.tar.gz ... ok downloading tfrmtbuilder_0.0.6.tar.gz ... ok downloading welo_0.1.4.tar.gz ... ok downloading car_3.1-2.tar.gz ... ok downloading codebook_0.9.2.tar.gz ... ok downloading datawizard_0.12.3.tar.gz ... ok downloading esquisse_2.0.1.tar.gz ... ok downloading eventglm_1.2.2.tar.gz ... ok downloading genekitr_1.2.8.tar.gz ... ok downloading Hmisc_5.1-3.tar.gz ... ok downloading ledger_2.0.11.tar.gz ... ok downloading metaconfoundr_0.1.2.tar.gz ... ok downloading multid_1.0.0.tar.gz ... ok downloading oceanis_1.8.5.tar.gz ... ok downloading pcutils_0.2.6.tar.gz ... ok downloading rosetta_0.3.12.tar.gz ... ok downloading sampleVADIR_1.0.0.tar.gz ... ok downloading text_1.2.3.tar.gz ... ok downloading ufs_0.5.12.tar.gz ... ok installing dependencies ‘acepack’, ‘alr4’, ‘bootES’, ‘careless’, ‘compareDF’, ‘ComplexUpset’, ‘compute.es’, ‘DataCombine’, ‘datamods’, ‘elastic’, ‘emojifont’, ‘esc’, ‘estimraw’, ‘europepmc’, ‘feather’, ‘flexsiteboard’, ‘geneset’, ‘gghalves’, ‘ggvenn’, ‘ggVennDiagram’, ‘GOplot’, ‘hexView’, ‘htm2txt’, ‘interactions’, ‘likert’, ‘mapsf’, ‘metaumbrella’, ‘MetaUtility’, ‘MultinomialCI’, ‘multiwayvcov’, ‘nanoparquet’, ‘netstat’, ‘osfr’, ‘phia’, ‘phosphoricons’, ‘pzfx’, ‘qmrparser’, ‘qreport’, ‘relaimpo’, ‘rio’, ‘rmatio’, ‘rmdpartials’, ‘rrvgo’, ‘safer’, ‘sjstats’, ‘sparkline’, ‘spsUtil’, ‘tfrmt’, ‘toastui’, ‘TOSTER’, ‘ufs’, ‘userfriendlyscience’, ‘voronoiTreemap’, ‘webp’ Warning: package ‘userfriendlyscience’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘maplegend’, ‘powerSurvEpi’ begin installing package ‘maplegend’ begin installing package ‘hexView’ begin installing package ‘pzfx’ begin installing package ‘powerSurvEpi’ begin installing package ‘rmatio’ begin installing package ‘nanoparquet’ begin installing package ‘interactions’ begin installing package ‘phia’ begin installing package ‘phosphoricons’ begin installing package ‘MultinomialCI’ begin installing package ‘qmrparser’ begin installing package ‘flexsiteboard’ begin installing package ‘ggvenn’ begin installing package ‘feather’ begin installing package ‘spsUtil’ begin installing package ‘multiwayvcov’ begin installing package ‘netstat’ begin installing package ‘elastic’ begin installing package ‘compareDF’ begin installing package ‘estimraw’ begin installing package ‘TOSTER’ begin installing package ‘esc’ begin installing package ‘compute.es’ begin installing package ‘MetaUtility’ begin installing package ‘emojifont’ begin installing package ‘webp’ begin installing package ‘DataCombine’ begin installing package ‘tfrmt’ * installing *source* package ‘netstat’ ... ** package ‘netstat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netstat) begin installing package ‘alr4’ * installing *source* package ‘MultinomialCI’ ... ** package ‘MultinomialCI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultinomialCI) begin installing package ‘rmdpartials’ * installing *source* package ‘pzfx’ ... ** package ‘pzfx’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pzfx) begin installing package ‘likert’ * installing *source* package ‘hexView’ ... ** package ‘hexView’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hexView) begin installing package ‘europepmc’ * installing *source* package ‘flexsiteboard’ ... ** package ‘flexsiteboard’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flexsiteboard) begin installing package ‘geneset’ * installing *source* package ‘multiwayvcov’ ... ** package ‘multiwayvcov’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multiwayvcov) begin installing package ‘ComplexUpset’ * installing *source* package ‘webp’ ... ** package ‘webp’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/webp Using PKG_LIBS=-lwebp ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvLNgct/R.INSTALL2497b0617da07b/webp/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c webp.c -o webp.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o webp.so register.o webp.o -lwebp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpvLNgct/R.INSTALL2497b0617da07b/webp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-webp/00new/webp/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webp) begin installing package ‘GOplot’ * installing *source* package ‘maplegend’ ... ** package ‘maplegend’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maplegend) begin installing package ‘rrvgo’ * installing *source* package ‘qmrparser’ ... ** package ‘qmrparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qmrparser) begin installing package ‘qreport’ * installing *source* package ‘esc’ ... ** package ‘esc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (esc) begin installing package ‘acepack’ * installing *source* package ‘phosphoricons’ ... ** package ‘phosphoricons’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phosphoricons) begin installing package ‘sparkline’ * installing *source* package ‘rmdpartials’ ... ** package ‘rmdpartials’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdpartials) begin installing package ‘safer’ * installing *source* package ‘estimraw’ ... ** package ‘estimraw’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (estimraw) begin installing package ‘htm2txt’ * installing *source* package ‘spsUtil’ ... ** package ‘spsUtil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spsUtil) begin installing package ‘gghalves’ * installing *source* package ‘compareDF’ ... ** package ‘compareDF’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compareDF) begin installing package ‘relaimpo’ * installing *source* package ‘compute.es’ ... ** package ‘compute.es’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compute.es) begin installing package ‘voronoiTreemap’ * installing *source* package ‘emojifont’ ... ** package ‘emojifont’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emojifont) begin installing package ‘ggVennDiagram’ * installing *source* package ‘safer’ ... ** package ‘safer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (safer) begin installing package ‘sjstats’ * installing *source* package ‘DataCombine’ ... ** package ‘DataCombine’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DataCombine) begin installing package ‘osfr’ * installing *source* package ‘ggvenn’ ... ** package ‘ggvenn’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggvenn) begin installing package ‘bootES’ * installing *source* package ‘htm2txt’ ... ** package ‘htm2txt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htm2txt) begin installing package ‘careless’ * installing *source* package ‘sparkline’ ... ** package ‘sparkline’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sparkline) begin installing package ‘rio’ * installing *source* package ‘elastic’ ... ** package ‘elastic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (elastic) begin installing package ‘toastui’ * installing *source* package ‘powerSurvEpi’ ... ** package ‘powerSurvEpi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (powerSurvEpi) begin installing package ‘mapsf’ * installing *source* package ‘geneset’ ... ** package ‘geneset’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (geneset) begin installing package ‘metaumbrella’ * installing *source* package ‘acepack’ ... ** package ‘acepack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnguV4a/R.INSTALL249f864186f0b8/acepack/src' gfortran-14 -fpic -g -O2 -Wall -mtune=native -c ace.f -o ace.o gfortran-14 -fpic -g -O2 -Wall -mtune=native -c avas.f -o avas.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -mtune=native -c rlsmo.f -o rlsmo.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o acepack.so ace.o avas.o init.o rlsmo.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnguV4a/R.INSTALL249f864186f0b8/acepack/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-acepack/00new/acepack/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (acepack) begin installing package ‘ufs’ * installing *source* package ‘europepmc’ ... ** package ‘europepmc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (europepmc) * installing *source* package ‘voronoiTreemap’ ... ** package ‘voronoiTreemap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (voronoiTreemap) * installing *source* package ‘bootES’ ... ** package ‘bootES’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bootES) * installing *source* package ‘phia’ ... ** package ‘phia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phia) * installing *source* package ‘careless’ ... ** package ‘careless’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (careless) * installing *source* package ‘likert’ ... ** package ‘likert’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (likert) * installing *source* package ‘GOplot’ ... ** package ‘GOplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GOplot) * installing *source* package ‘ComplexUpset’ ... ** package ‘ComplexUpset’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ComplexUpset) * installing *source* package ‘rio’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rio) * installing *source* package ‘tfrmt’ ... ** package ‘tfrmt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tfrmt) * installing *source* package ‘gghalves’ ... ** package ‘gghalves’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gghalves) * installing *source* package ‘sjstats’ ... ** package ‘sjstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sjstats) * installing *source* package ‘interactions’ ... ** package ‘interactions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (interactions) * installing *source* package ‘alr4’ ... ** package ‘alr4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alr4) * installing *source* package ‘ggVennDiagram’ ... ** package ‘ggVennDiagram’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggVennDiagram) * installing *source* package ‘toastui’ ... ** package ‘toastui’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toastui) begin installing package ‘datamods’ * installing *source* package ‘osfr’ ... ** package ‘osfr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (osfr) * installing *source* package ‘MetaUtility’ ... ** package ‘MetaUtility’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MetaUtility) * installing *source* package ‘mapsf’ ... ** package ‘mapsf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mapsf) * installing *source* package ‘qreport’ ... ** package ‘qreport’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qreport) * installing *source* package ‘relaimpo’ ... ** package ‘relaimpo’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (relaimpo) * installing *source* package ‘ufs’ ... ** package ‘ufs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ufs) * installing *source* package ‘datamods’ ... ** package ‘datamods’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (datamods) * installing *source* package ‘metaumbrella’ ... ** package ‘metaumbrella’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaumbrella) * installing *source* package ‘TOSTER’ ... ** package ‘TOSTER’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TOSTER) * installing *source* package ‘rrvgo’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rrvgo) * installing *source* package ‘feather’ ... ** package ‘feather’ successfully unpacked and MD5 sums checked ** using staged installation Platform is little endian. Good. ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmppomj5G/R.INSTALL2497823e5c506d/feather/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-read.cpp -o feather-read.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-types.cpp -o feather-types.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather-write.cpp -o feather-write.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/buffer.cc -o feather/buffer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/feather-c.cc -o feather/feather-c.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/io.cc -o feather/io.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/metadata.cc -o feather/metadata.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/reader.cc -o feather/reader.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/status.cc -o feather/status.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/types.cc -o feather/types.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c feather/writer.cc -o feather/writer.o ar rcs libfeather.a feather/buffer.o feather/feather-c.o feather/io.o feather/metadata.o feather/reader.o feather/status.o feather/types.o feather/writer.o g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o feather.so RcppExports.o feather-read.o feather-types.o feather-write.o -L. -lfeather -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmppomj5G/R.INSTALL2497823e5c506d/feather/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-feather/00new/feather/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (feather) * installing *source* package ‘rmatio’ ... ** package ‘rmatio’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking inttypes.h... yes checking stdlib.h... yes checking stdint.h... yes checking strings.h... yes checking string.h... yes checking sys/stat.h... yes checking sys/types.h... yes checking unistd.h... checking for zlib... yes checking size of char... 1 checking size of short... 2 checking size of double... 8 checking size of float... 4 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of size_t... 8 checking size of void *... 8 checking for mat_int8_t... int8_t checking for mat_int16_t... int16_t checking for mat_int32_t... int32_t checking for mat_int64_t... int64_t checking for mat_uint8_t... uint8_t checking for mat_uint16_t... uint16_t checking for mat_uint32_t... uint32_t checking for mat_uint64_t... uint64_t configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/matio/config.h config.status: src/matio/config.h is unchanged ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpl1Wdmo/R.INSTALL24976027d939cc/rmatio/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/endian.c -o matio/endian.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/inflate.c -o matio/inflate.o matio/inflate.c: In function ‘InflateSkip’: matio/inflate.c:77:22: warning: storing the address of local variable ‘uncomp_buf’ in ‘*z.next_out’ [-Wdangling-pointer=] 77 | z->next_out = uncomp_buf; | ~~~~~~~~~~~~~^~~~~~~~~~~~ matio/inflate.c:51:31: note: ‘uncomp_buf’ declared here 51 | mat_uint8_t comp_buf[512],uncomp_buf[512]; | ^~~~~~~~~~ matio/inflate.c:49:35: note: ‘z’ declared here 49 | InflateSkip(mat_t *mat, z_streamp z, int nbytes) | ~~~~~~~~~~^ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat4.c -o matio/mat4.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat5.c -o matio/mat5.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat.c -o matio/mat.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_cell.c -o matio/matvar_cell.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_struct.c -o matio/matvar_struct.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/read_data.c -o matio/read_data.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rmatio.c -o rmatio.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o rmatio.so matio/endian.o matio/inflate.o matio/mat4.o matio/mat5.o matio/mat.o matio/matvar_cell.o matio/matvar_struct.o matio/read_data.o rmatio.o -lz -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpl1Wdmo/R.INSTALL24976027d939cc/rmatio/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rmatio/00new/rmatio/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmatio) * installing *source* package ‘nanoparquet’ ... ** package ‘nanoparquet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvB2YFc/R.INSTALL2497655a076556/nanoparquet/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c rwrapper.cpp -o rwrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c protect.cpp -o protect.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c read.cpp -o read.o In file included from lib/nanoparquet.h:8, from read.cpp:4: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ read.cpp: In function ‘SEXPREC* nanoparquet_read(SEXP)’: read.cpp:59:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 59 | for (auto i = 0; i < ncols; i++) { | ~~^~~~~~~ read.cpp:228:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 228 | for (auto i = 0; i < strings.size(); i++) { | ~~^~~~~~~~~~~~~~~~ read.cpp:324:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 324 | for (auto i = 0; i < type_len; i++) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c write.cpp -o write.o In file included from lib/nanoparquet.h:8, from write.cpp:1: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ In file included from write.cpp:6: lib/memstream.h: In member function ‘virtual std::streamsize MemStream::xsputn(const char*, std::streamsize)’: lib/memstream.h:37:13: warning: comparison of integer expressions of different signedness: ‘std::streamsize’ {aka ‘long int’} and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 37 | if (n > space) { | ~~^~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_int32(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:154:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 154 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_int64(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:165:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 165 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_double(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:193:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 193 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_byte_array(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:203:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 203 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual uint32_t RParquetOutFile::get_size_byte_array(uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:221:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 221 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In function ‘void write_boolean_impl(std::ostream&, SEXP, uint64_t, uint64_t)’: write.cpp:237:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 237 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_boolean_as_int(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:275:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 275 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual uint32_t RParquetOutFile::write_present(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:285:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 285 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_int32(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:344:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 344 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_int64(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:363:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 363 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_double(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:400:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 400 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_boolean_as_int(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:417:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 417 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_byte_array(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:437:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 437 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_present_boolean(std::ostream&, uint32_t, uint32_t, uint64_t, uint64_t)’: write.cpp:461:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 461 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_dictionary(std::ostream&, uint32_t)’: write.cpp:600:28: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 600 | for (uint64_t i = 0; i < len; i++) { | ~~^~~~~ write.cpp: In member function ‘virtual void RParquetOutFile::write_dictionary_indices(std::ostream&, uint32_t, uint64_t, uint64_t)’: write.cpp:634:13: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 634 | if (until > Rf_xlength(col)) { | ~~~~~~^~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c read-metadata.cpp -o read-metadata.o In file included from lib/nanoparquet.h:8, from read-metadata.cpp:1: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ read-metadata.cpp: In function ‘SEXPREC* convert_key_value_metadata(const parquet::FileMetaData&)’: read-metadata.cpp:140:28: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘long unsigned int’ [-Wsign-compare] 140 | for (R_xlen_t i = 0; i < kvsize; i++) { | ~~^~~~~~~~ read-metadata.cpp: In function ‘SEXPREC* convert_row_groups(const char*, std::vector&)’: read-metadata.cpp:254:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 254 | for (auto i = 0; i < nrgs; i++) { | ~~^~~~~~ read-metadata.cpp: In function ‘SEXPREC* convert_column_chunks(const char*, std::vector&)’: read-metadata.cpp:304:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 304 | for (auto i = 0; i < rgs.size(); i++) { | ~~^~~~~~~~~~~~ read-metadata.cpp:332:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 332 | for (int i = 0; i < rgs.size(); i++) { | ~~^~~~~~~~~~~~ read-metadata.cpp:333:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 333 | for (int j = 0; j < rgs[i].columns.size(); j++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ read-metadata.cpp:352:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 352 | for (auto k = 0; k < cmd.encodings.size(); k++) { | ~~^~~~~~~~~~~~~~~~~~~~~~ read-metadata.cpp:356:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 356 | for (auto k = 0; k < cmd.path_in_schema.size(); k++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c read-pages.cpp -o read-pages.o In file included from lib/nanoparquet.h:8, from read-pages.cpp:1: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ read-pages.cpp: In function ‘SEXPREC* nanoparquet_read_pages(SEXP)’: read-pages.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | for (auto i = 0; i < rgs.size(); i++) { | ~~^~~~~~~~~~~~ read-pages.cpp:25:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (auto j = 0; j < rgs[i].columns.size(); j++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ read-pages.cpp:98:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 98 | for (auto i = 0; i < rgs.size(); i++) { | ~~^~~~~~~~~~~~ read-pages.cpp:99:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 99 | for (auto j = 0; j < rgs[i].columns.size(); j++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ read-pages.cpp: In function ‘PageData find_page(nanoparquet::ParquetFile&, int64_t)’: read-pages.cpp:210:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (auto i = 0; i < rgs.size(); i++) { | ~~^~~~~~~~~~~~ read-pages.cpp:211:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 211 | for (auto j = 0; j < rgs[i].columns.size(); j++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ read-pages.cpp: In function ‘SEXPREC* nanoparquet_read_page(SEXP, SEXP)’: read-pages.cpp:303:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 303 | for (int i = 0; i < schema.size(); i++) { | ~~^~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c arrow-schema.cpp -o arrow-schema.o In file included from arrow-schema.cpp:7: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ arrow-schema.cpp: In function ‘SEXPREC* nanoparquet_parse_arrow_schema_impl(uint8_t*, uint32_t)’: arrow-schema.cpp:80:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (auto i = 0; i < sch->fields.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ arrow-schema.cpp:187:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | for (auto j = 0; j < ft->typeIds.size(); j++) { | ~~^~~~~~~~~~~~~~~~~~~~ arrow-schema.cpp:262:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 262 | for (auto j = 0; j < kvlen; j++) { | ~~^~~~~~~ arrow-schema.cpp:280:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 280 | for (auto i = 0; i < sch->custom_metadata.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arrow-schema.cpp:294:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 294 | for (auto i = 0; i < sch->features.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~ arrow-schema.cpp: In function ‘SEXPREC* nanoparquet_encode_arrow_schema(SEXP)’: arrow-schema.cpp:379:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 379 | for (auto i = 0; i < nfields; i++) { | ~~^~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c base64.cpp -o base64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c r-base64.cpp -o r-base64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c snappy.cpp -o snappy.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c encodings.cpp -o encodings.o In file included from lib/nanoparquet.h:8, from lib/RleBpDecoder.h:5, from encodings.cpp:1: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatch(T*, int) [with T = unsigned int]’: encodings.cpp:30:19: required from here 30 | decoder.GetBatch((uint32_t *)INTEGER(res), num_values); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:30:24: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 30 | while (values_read < batch_size) { | ~~~~~~~~~~~~^~~~~~~~~~~~ In file included from encodings.cpp:2: lib/RleBpEncoder.h: In instantiation of ‘uint32_t RleBpEncode(const T*, uint32_t, uint8_t, uint8_t*, uint32_t) [with T = int; uint32_t = unsigned int; uint8_t = unsigned char]’: encodings.cpp:46:26: required from here 46 | size_t rs = RleBpEncode(input, input_len, bw, output, os); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lib/RleBpEncoder.h:40:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 40 | if (reps >= min_reps) { | ~~~~~^~~~~~~~~~~ In file included from encodings.cpp:3: lib/DbpDecoder.h: In instantiation of ‘uint8_t* DbpDecoder::decode(T*) [with T = int; Tunsigned = unsigned int; uint8_t = unsigned char]’: encodings.cpp:64:13: required from here 64 | dbp.decode(INTEGER(res)); | ~~~~~~~~~~^~~~~~~~~~~~~~ lib/DbpDecoder.h:68:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 68 | for (auto i = 0; todo > 0 && i < mini_blocks_per_block; i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ lib/DbpDecoder.h:84:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for (auto i = 0; i < mb_vals; i++) { | ~~^~~~~~~~~ lib/DbpDecoder.h: In instantiation of ‘uint8_t* DbpDecoder::decode(T*) [with T = long int; Tunsigned = long unsigned int; uint8_t = unsigned char]’: encodings.cpp:82:13: required from here 82 | dbp.decode((int64_t*) REAL(res)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ lib/DbpDecoder.h:68:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 68 | for (auto i = 0; todo > 0 && i < mini_blocks_per_block; i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ lib/DbpDecoder.h:84:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for (auto i = 0; i < mb_vals; i++) { | ~~^~~~~~~~~ In file included from lib/DbpDecoder.h:6: lib/decode-utils.h: In instantiation of ‘void unpack_bits(uint8_t*, uint64_t, uint8_t, T*, uint64_t) [with T = unsigned int; uint8_t = unsigned char; uint64_t = long unsigned int]’: encodings.cpp:100:24: required from here 100 | unpack_bits( | ~~~~~~~~~~~~~~~~~~~~~^ 101 | RAW(x), | ~~~~~~~ 102 | Rf_xlength(x), | ~~~~~~~~~~~~~~ 103 | INTEGER(bit_width)[0], | ~~~~~~~~~~~~~~~~~~~~~~ 104 | (uint32_t*) INTEGER(res), | ~~~~~~~~~~~~~~~~~~~~~~~~~ 105 | cn | ~~ 106 | ); | ~ lib/decode-utils.h:58:21: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 58 | while (num_values > output_group_size) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ lib/decode-utils.h: In instantiation of ‘void unpack_bits(uint8_t*, uint64_t, uint8_t, T*, uint64_t) [with T = long unsigned int; uint8_t = unsigned char; uint64_t = long unsigned int]’: lib/DbpDecoder.h:77:31: required from ‘uint8_t* DbpDecoder::decode(T*) [with T = long int; Tunsigned = long unsigned int; uint8_t = unsigned char]’ 77 | unpack_bits( | ~~~~~~~~~~~~~~~~~~~~~~^ 78 | buf->start, | ~~~~~~~~~~~ 79 | mb_len, | ~~~~~~~ 80 | bw, | ~~~ 81 | (Tunsigned*) values, | ~~~~~~~~~~~~~~~~~~~~ 82 | mb_vals | ~~~~~~~ 83 | ); | ~ encodings.cpp:82:13: required from here 82 | dbp.decode((int64_t*) REAL(res)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ lib/decode-utils.h:58:21: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 58 | while (num_values > output_group_size) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c dictionary-encoding.cpp -o dictionary-encoding.o dictionary-encoding.cpp: In function ‘SEXPREC* nanoparquet_avg_run_length(SEXP, SEXP)’: dictionary-encoding.cpp:220:11: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 220 | if (len == -1) { | ~~~~^~~~~ dictionary-encoding.cpp:230:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 230 | for (auto i = 0; i < len; i++, xx++) { | ~~^~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c test.cpp -o test.o In file included from test.cpp:2: lib/memstream.h: In member function ‘virtual std::streamsize MemStream::xsputn(const char*, std::streamsize)’: lib/memstream.h:37:13: warning: comparison of integer expressions of different signedness: ‘std::streamsize’ {aka ‘long int’} and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 37 | if (n > space) { | ~~^~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c lib/ParquetFile.cpp -o lib/ParquetFile.o In file included from lib/nanoparquet.h:8, from lib/ParquetFile.cpp:14: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ lib/ParquetFile.cpp: In member function ‘void nanoparquet::ParquetFile::read_checks()’: lib/ParquetFile.cpp:139:45: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 139 | if (file_meta_data.schema[0].num_children != lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_dict_page(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:268:49: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int32_t dict_index = 0; dict_index < dict_size; dict_index++) { | ~~~~~~~~~~~^~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_dict(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:564:30: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 564 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_rle(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:641:28: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 641 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:655:20: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 655 | val_offset < num_values; | ~~~~~~~~~~~^~~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_delta_binary_packed(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:680:37: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 680 | for (uint32_t i = 0, j = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:695:37: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 695 | for (uint32_t i = 0, j = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_delta_length_byte_array(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:735:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 735 | for (uint32_t i = 0, j = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_delta_byte_array(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:781:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 781 | for (auto i = 0; i < num_non_null_values; i++) shc_len += pre_lengths[i]; | ~~^~~~~~~~~~~~~~~~~~~~~ lib/ParquetFile.cpp:782:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 782 | for (auto i = 0; i < num_non_null_values; i++) shc_len += suf_lengths[i]; | ~~^~~~~~~~~~~~~~~~~~~~~ lib/ParquetFile.cpp:790:35: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 790 | for (uint32_t i = 0, j = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void ColumnScan::scan_data_page_byte_stream_split(nanoparquet::ResultColumn&)’: lib/ParquetFile.cpp:881:30: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 881 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:885:37: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 885 | for (uint32_t i = 0, j = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:894:32: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 894 | for (uint32_t b = 0; b < type_len; b++) { | ~~^~~~~~~~~~ lib/ParquetFile.cpp: In member function ‘void nanoparquet::ParquetFile::read_chunk(int64_t, int64_t, int8_t*)’: lib/ParquetFile.cpp:1257:12: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long int’} and ‘long unsigned int’ [-Wsign-compare] 1257 | if (size > file_size - offset) { | ~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from lib/ParquetFile.cpp:15: lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatch(T*, int) [with T = unsigned char]’: lib/ParquetFile.cpp:340:28: required from here 340 | dec.GetBatch(defined_ptr, num_values); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:30:24: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 30 | while (values_read < batch_size) { | ~~~~~~~~~~~~^~~~~~~~~~~~ lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatchSpaced(uint32_t, uint32_t, const uint8_t*, T*) [with T = unsigned int; uint32_t = unsigned int; uint8_t = unsigned char]’: lib/ParquetFile.cpp:570:37: required from here 570 | dec.GetBatchSpaced(num_values, null_count, defined_ptr, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 | offsets.get()); | ~~~~~~~~~~~~~~ lib/RleBpDecoder.h:104:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 104 | if (actual_read != literal_batch) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:113:32: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 113 | while (literals_read < literal_batch) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatch(T*, int) [with T = unsigned int]’: lib/ParquetFile.cpp:573:31: required from here 573 | dec.GetBatch(offsets.get(), num_values); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:30:24: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 30 | while (values_read < batch_size) { | ~~~~~~~~~~~~^~~~~~~~~~~~ lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatchSpaced(uint32_t, uint32_t, const uint8_t*, T*) [with T = bool; uint32_t = unsigned int; uint8_t = unsigned char]’: lib/ParquetFile.cpp:647:31: required from here 647 | dec.GetBatchSpaced(num_values, null_count, defined_ptr, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 | offsets.get()); | ~~~~~~~~~~~~~~ lib/RleBpDecoder.h:104:27: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 104 | if (actual_read != literal_batch) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:113:32: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 113 | while (literals_read < literal_batch) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ lib/RleBpDecoder.h: In instantiation of ‘int RleBpDecoder::GetBatch(T*, int) [with T = bool]’: lib/ParquetFile.cpp:650:25: required from here 650 | dec.GetBatch(offsets.get(), num_values); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ lib/RleBpDecoder.h:30:24: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 30 | while (values_read < batch_size) { | ~~~~~~~~~~~~^~~~~~~~~~~~ In file included from lib/ParquetFile.cpp:16: lib/DbpDecoder.h: In instantiation of ‘uint8_t* DbpDecoder::decode(T*) [with T = int; Tunsigned = unsigned int; uint8_t = unsigned char]’: lib/ParquetFile.cpp:679:17: required from here 679 | dec.decode(vals.get()); | ~~~~~~~~~~^~~~~~~~~~~~ lib/DbpDecoder.h:68:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 68 | for (auto i = 0; todo > 0 && i < mini_blocks_per_block; i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ lib/DbpDecoder.h:84:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for (auto i = 0; i < mb_vals; i++) { | ~~^~~~~~~~~ lib/DbpDecoder.h: In instantiation of ‘uint8_t* DbpDecoder::decode(T*) [with T = long int; Tunsigned = long unsigned int; uint8_t = unsigned char]’: lib/ParquetFile.cpp:694:17: required from here 694 | dec.decode(vals.get()); | ~~~~~~~~~~^~~~~~~~~~~~ lib/DbpDecoder.h:68:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 68 | for (auto i = 0; todo > 0 && i < mini_blocks_per_block; i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ lib/DbpDecoder.h:84:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for (auto i = 0; i < mb_vals; i++) { | ~~^~~~~~~~~ lib/ParquetFile.cpp: In instantiation of ‘void ColumnScan::fill_values_bss(nanoparquet::ResultColumn&) [with T = float]’: lib/ParquetFile.cpp:854:29: required from here 854 | fill_values_bss(result_col); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ lib/ParquetFile.cpp:830:28: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 830 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:842:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 842 | for (int b = 0; b < sizeof(T); b++) { | ~~^~~~~~~~~~~ lib/ParquetFile.cpp: In instantiation of ‘void ColumnScan::fill_values_bss(nanoparquet::ResultColumn&) [with T = double]’: lib/ParquetFile.cpp:857:30: required from here 857 | fill_values_bss(result_col); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ lib/ParquetFile.cpp:830:28: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 830 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:842:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 842 | for (int b = 0; b < sizeof(T); b++) { | ~~^~~~~~~~~~~ lib/ParquetFile.cpp: In instantiation of ‘void ColumnScan::fill_values_bss(nanoparquet::ResultColumn&) [with T = int]’: lib/ParquetFile.cpp:860:31: required from here 860 | fill_values_bss(result_col); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ lib/ParquetFile.cpp:830:28: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 830 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:842:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 842 | for (int b = 0; b < sizeof(T); b++) { | ~~^~~~~~~~~~~ lib/ParquetFile.cpp: In instantiation of ‘void ColumnScan::fill_values_bss(nanoparquet::ResultColumn&) [with T = long int]’: lib/ParquetFile.cpp:863:31: required from here 863 | fill_values_bss(result_col); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ lib/ParquetFile.cpp:830:28: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 830 | for (uint32_t i = 0; i < num_values; i++) { | ~~^~~~~~~~~~~~ lib/ParquetFile.cpp:842:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 842 | for (int b = 0; b < sizeof(T); b++) { | ~~^~~~~~~~~~~ In file included from lib/DbpDecoder.h:6: lib/decode-utils.h: In instantiation of ‘void unpack_bits(uint8_t*, uint64_t, uint8_t, T*, uint64_t) [with T = unsigned int; uint8_t = unsigned char; uint64_t = long unsigned int]’: lib/DbpDecoder.h:77:31: required from ‘uint8_t* DbpDecoder::decode(T*) [with T = int; Tunsigned = unsigned int; uint8_t = unsigned char]’ 77 | unpack_bits( | ~~~~~~~~~~~~~~~~~~~~~~^ 78 | buf->start, | ~~~~~~~~~~~ 79 | mb_len, | ~~~~~~~ 80 | bw, | ~~~ 81 | (Tunsigned*) values, | ~~~~~~~~~~~~~~~~~~~~ 82 | mb_vals | ~~~~~~~ 83 | ); | ~ lib/ParquetFile.cpp:679:17: required from here 679 | dec.decode(vals.get()); | ~~~~~~~~~~^~~~~~~~~~~~ lib/decode-utils.h:58:21: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 58 | while (num_values > output_group_size) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ lib/decode-utils.h: In instantiation of ‘void unpack_bits(uint8_t*, uint64_t, uint8_t, T*, uint64_t) [with T = long unsigned int; uint8_t = unsigned char; uint64_t = long unsigned int]’: lib/DbpDecoder.h:77:31: required from ‘uint8_t* DbpDecoder::decode(T*) [with T = long int; Tunsigned = long unsigned int; uint8_t = unsigned char]’ 77 | unpack_bits( | ~~~~~~~~~~~~~~~~~~~~~~^ 78 | buf->start, | ~~~~~~~~~~~ 79 | mb_len, | ~~~~~~~ 80 | bw, | ~~~ 81 | (Tunsigned*) values, | ~~~~~~~~~~~~~~~~~~~~ 82 | mb_vals | ~~~~~~~ 83 | ); | ~ lib/ParquetFile.cpp:694:17: required from here 694 | dec.decode(vals.get()); | ~~~~~~~~~~^~~~~~~~~~~~ lib/decode-utils.h:58:21: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 58 | while (num_values > output_group_size) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In member function ‘int RleBpDecoder::GetBatchSpaced(uint32_t, uint32_t, const uint8_t*, T*) [with T = bool]’, inlined from ‘void ColumnScan::scan_data_page_rle(nanoparquet::ResultColumn&)’ at lib/ParquetFile.cpp:647:31: lib/RleBpDecoder.h:110:27: warning: ‘indices’ may be used uninitialized [-Wmaybe-uninitialized] 110 | *out++ = indices[0]; | ~~~~~~~^ lib/RleBpDecoder.h: In member function ‘void ColumnScan::scan_data_page_rle(nanoparquet::ResultColumn&)’: lib/RleBpDecoder.h:100:13: note: ‘indices’ declared here 100 | T indices[kBufferSize]; | ^~~~~~~ In member function ‘int RleBpDecoder::GetBatchSpaced(uint32_t, uint32_t, const uint8_t*, T*) [with T = unsigned int]’, inlined from ‘void ColumnScan::scan_data_page_dict(nanoparquet::ResultColumn&)’ at lib/ParquetFile.cpp:570:37: lib/RleBpDecoder.h:110:27: warning: ‘indices’ may be used uninitialized [-Wmaybe-uninitialized] 110 | *out++ = indices[0]; | ~~~~~~~^ lib/RleBpDecoder.h: In member function ‘void ColumnScan::scan_data_page_dict(nanoparquet::ResultColumn&)’: lib/RleBpDecoder.h:100:13: note: ‘indices’ declared here 100 | T indices[kBufferSize]; | ^~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c lib/ParquetOutFile.cpp -o lib/ParquetOutFile.o In file included from lib/nanoparquet.h:8, from lib/ParquetOutFile.cpp:12: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ lib/ParquetOutFile.cpp: In member function ‘void nanoparquet::ParquetOutFile::write_data_pages(uint32_t)’: lib/ParquetOutFile.cpp:591:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 591 | for (auto i = 0; i < num_pages; i++) { | ~~^~~~~~~~~~~ In file included from lib/ParquetOutFile.cpp:13: lib/RleBpEncoder.h: In instantiation of ‘uint32_t RleBpEncode(const T*, uint32_t, uint8_t, uint8_t*, uint32_t) [with T = int; uint32_t = unsigned int; uint8_t = unsigned char]’: lib/ParquetOutFile.cpp:438:32: required from here 438 | size_t tgt_size = RleBpEncode( | ~~~~~~~~~~~^ 439 | (int*) src.ptr, | ~~~~~~~~~~~~~~~ 440 | src_size, | ~~~~~~~~~ 441 | bit_width, | ~~~~~~~~~~ 442 | (uint8_t *) tgt.ptr + skip + (add_bit_width ? 1 : 0) + (add_size ? 4 : 0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 | tgt_size_est | ~~~~~~~~~~~~ 444 | ); | ~ lib/RleBpEncoder.h:40:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 40 | if (reps >= min_reps) { | ~~~~~^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c lib/RleBpDecoder.cpp -o lib/RleBpDecoder.o In file included from lib/nanoparquet.h:8, from lib/RleBpDecoder.h:5, from lib/RleBpDecoder.cpp:1: lib/bytebuffer.h: In member function ‘virtual std::streamsize ByteBuffer::xsputn(const char*, std::streamsize)’: lib/bytebuffer.h:34:15: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘std::streamsize’ {aka ‘long int’} [-Wsign-compare] 34 | if (space < n) { | ~~~~~~^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c parquet/parquet_types.cpp -o parquet/parquet_types.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c thrift/protocol/TProtocol.cpp -o thrift/protocol/TProtocol.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c thrift/transport/TTransportException.cpp -o thrift/transport/TTransportException.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c thrift/transport/TBufferTransports.cpp -o thrift/transport/TBufferTransports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c fastpforlib/bitpacking.cpp -o fastpforlib/bitpacking.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c snappy/snappy.cc -o snappy/snappy.o snappy/snappy.cc: In member function ‘void snappy::SnappySinkAllocator::Flush(size_t)’: snappy/snappy.cc:1599:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1599 | for (int i = 0; i < blocks_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~ In file included from snappy/snappy-internal.h:34, from snappy/snappy.cc:30: snappy/snappy.cc: In instantiation of ‘bool snappy::SnappyScatteredWriter::AppendFromSelf(size_t, size_t) [with Allocator = snappy::SnappySinkAllocator; size_t = long unsigned int]’: snappy/snappy.cc:902:36: required from ‘void snappy::SnappyDecompressor::DecompressAllTags(Writer*) [with Writer = snappy::SnappyScatteredWriter]’ 902 | if (!writer->AppendFromSelf(copy_offset + trailer, length)) { | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ snappy/snappy.cc:991:34: required from ‘bool snappy::InternalUncompressAllTags(SnappyDecompressor*, Writer*, uint32, uint32) [with Writer = SnappyScatteredWriter; uint32 = unsigned int]’ 991 | decompressor->DecompressAllTags(writer); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ snappy/snappy.cc:1657:37: required from here 1657 | return InternalUncompressAllTags(&decompressor, &writer, compressed_len, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1658 | uncompressed_len); | ~~~~~~~~~~~~~~~~~ snappy/snappy.cc:1511:41: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1511 | if (SNAPPY_PREDICT_TRUE(offset - 1u < op_ptr_ - op_base_ && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ snappy/snappy-stubs-internal.h:104:32: note: in definition of macro ‘SNAPPY_PREDICT_TRUE’ 104 | #define SNAPPY_PREDICT_TRUE(x) x | ^ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c snappy/snappy-sinksource.cc -o snappy/snappy-sinksource.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c miniz/miniz.cpp -o miniz/miniz.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/common/entropy_common.cpp -o zstd/common/entropy_common.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/common/error_private.cpp -o zstd/common/error_private.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/common/fse_decompress.cpp -o zstd/common/fse_decompress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/common/xxhash.cpp -o zstd/common/xxhash.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/common/zstd_common.cpp -o zstd/common/zstd_common.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/decompress/huf_decompress.cpp -o zstd/decompress/huf_decompress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/decompress/zstd_ddict.cpp -o zstd/decompress/zstd_ddict.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/decompress/zstd_decompress.cpp -o zstd/decompress/zstd_decompress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/decompress/zstd_decompress_block.cpp -o zstd/decompress/zstd_decompress_block.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/fse_compress.cpp -o zstd/compress/fse_compress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/hist.cpp -o zstd/compress/hist.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/huf_compress.cpp -o zstd/compress/huf_compress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_compress.cpp -o zstd/compress/zstd_compress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_compress_literals.cpp -o zstd/compress/zstd_compress_literals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_compress_sequences.cpp -o zstd/compress/zstd_compress_sequences.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_compress_superblock.cpp -o zstd/compress/zstd_compress_superblock.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_double_fast.cpp -o zstd/compress/zstd_double_fast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_fast.cpp -o zstd/compress/zstd_fast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_lazy.cpp -o zstd/compress/zstd_lazy.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_ldm.cpp -o zstd/compress/zstd_ldm.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Ithrift -I. -Izstd/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O2 -Wall -pedantic -mtune=native -c zstd/compress/zstd_opt.cpp -o zstd/compress/zstd_opt.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o nanoparquet.so rwrapper.o protect.o read.o write.o read-metadata.o read-pages.o arrow-schema.o base64.o r-base64.o snappy.o encodings.o dictionary-encoding.o test.o lib/ParquetFile.o lib/ParquetOutFile.o lib/RleBpDecoder.o parquet/parquet_types.o thrift/protocol/TProtocol.o thrift/transport/TTransportException.o thrift/transport/TBufferTransports.o fastpforlib/bitpacking.o snappy/snappy.o snappy/snappy-sinksource.o miniz/miniz.o zstd/common/entropy_common.o zstd/common/error_private.o zstd/common/fse_decompress.o zstd/common/xxhash.o zstd/common/zstd_common.o zstd/decompress/huf_decompress.o zstd/decompress/zstd_ddict.o zstd/decompress/zstd_decompress.o zstd/decompress/zstd_decompress_block.o zstd/compress/fse_compress.o zstd/compress/hist.o zstd/compress/huf_compress.o zstd/compress/zstd_compress.o zstd/compress/zstd_compress_literals.o zstd/compress/zstd_compress_sequences.o zstd/compress/zstd_compress_superblock.o zstd/compress/zstd_double_fast.o zstd/compress/zstd_fast.o zstd/compress/zstd_lazy.o zstd/compress/zstd_ldm.o zstd/compress/zstd_opt.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpvB2YFc/R.INSTALL2497655a076556/nanoparquet/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nanoparquet/00new/nanoparquet ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nanoparquet) checking rio_1.2.3.tar.gz ... checking boxr_0.3.6.tar.gz ... checking allMT_0.1.0.tar.gz ... checking bruceR_2024.6.tar.gz ... checking childfree_0.0.3.tar.gz ... checking cloudstoR_0.2.0.tar.gz ... checking datamods_1.5.2.tar.gz ... checking dataquieR_2.1.0.tar.gz ... checking DistPlotter_0.0.2.tar.gz ... checking dpmr_0.1.9.tar.gz ... checking editData_0.1.8.tar.gz ... checking epiCleanr_0.2.0.tar.gz ... checking estadistica_0.2.3.tar.gz ... checking ExPanDaR_0.5.3.tar.gz ... checking framecleaner_0.2.1.tar.gz ... checking genogeographer_0.1.19.tar.gz ... checking gesisdata_0.1.2.tar.gz ... checking heterogen_1.2.33.tar.gz ... checking IGoRRR_0.3.4.tar.gz ... checking importinegi_1.2.1.tar.gz ... checking ISRaD_2.5.5.tar.gz ... checking kibior_0.1.1.tar.gz ... checking lehuynh_0.1.1.tar.gz ... checking metaConvert_1.0.0.tar.gz ... checking mmstat4_0.2.1.tar.gz ... checking NormalityAssessment_0.1.0.tar.gz ... checking normfluodbf_1.5.2.tar.gz ... checking octopus_0.4.2.tar.gz ... checking tfrmtbuilder_0.0.6.tar.gz ... checking datawizard_0.12.3.tar.gz ... checking ufs_0.5.12.tar.gz ... checking rosetta_0.3.12.tar.gz ... checking ledger_2.0.11.tar.gz ... checking rUM_2.0.0.tar.gz ... checking multid_1.0.0.tar.gz ... checking esquisse_2.0.1.tar.gz ... checking codebook_0.9.2.tar.gz ... checking psData_0.2.2.tar.gz ... checking text_1.2.3.tar.gz ... checking eventglm_1.2.2.tar.gz ... checking metaconfoundr_0.1.2.tar.gz ... checking welo_0.1.4.tar.gz ... checking pewdata_0.3.2.tar.gz ... checking pcutils_0.2.6.tar.gz ... checking genekitr_1.2.8.tar.gz ... checking Hmisc_5.1-3.tar.gz ... checking PRISMA2020_1.1.1.tar.gz ... checking ropercenter_0.3.2.tar.gz ... checking oceanis_1.8.5.tar.gz ... checking sampleVADIR_1.0.0.tar.gz ... checking car_3.1-2.tar.gz ... Depends: Package: rio Depends: R (>= 4.0) Imports: tools, stats, utils, foreign, haven (>= 1.1.2), curl (>= 0.6), data.table (>= 1.11.2), readxl (>= 0.1.1), tibble, writexl, lifecycle, R.utils, readr Timings: user system elapsed rio 65.183 6.405 75.39 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 14 36 Check results summary: rio ... OK rdepends_allMT ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_boxr ... NOTE * checking Rd cross-references ... NOTE rdepends_bruceR ... OK rdepends_car ... NOTE * checking Rd files ... [1s/1s] NOTE * checking Rd cross-references ... NOTE rdepends_childfree ... OK rdepends_cloudstoR ... OK rdepends_codebook ... OK rdepends_datamods ... OK rdepends_dataquieR ... NOTE * checking Rd cross-references ... NOTE rdepends_datawizard ... OK rdepends_DistPlotter ... OK rdepends_dpmr ... NOTE * checking Rd cross-references ... NOTE rdepends_editData ... OK rdepends_epiCleanr ... NOTE * checking Rd cross-references ... NOTE rdepends_esquisse ... OK rdepends_estadistica ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_eventglm ... OK rdepends_ExPanDaR ... OK rdepends_framecleaner ... OK rdepends_genekitr ... OK rdepends_genogeographer ... OK rdepends_gesisdata ... OK rdepends_heterogen ... OK rdepends_Hmisc ... NOTE * checking R code for possible problems ... [70s/70s] NOTE * checking Rd cross-references ... NOTE rdepends_IGoRRR ... OK rdepends_importinegi ... OK rdepends_ISRaD ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_kibior ... NOTE * checking Rd cross-references ... NOTE rdepends_ledger ... OK rdepends_lehuynh ... OK rdepends_metaconfoundr ... OK rdepends_metaConvert ... OK rdepends_mmstat4 ... OK rdepends_multid ... OK rdepends_NormalityAssessment ... OK rdepends_normfluodbf ... OK rdepends_oceanis ... OK rdepends_octopus ... OK rdepends_pcutils ... OK rdepends_pewdata ... OK rdepends_PRISMA2020 ... OK rdepends_psData ... NOTE * checking Rd files ... [0s/0s] NOTE * checking Rd cross-references ... NOTE rdepends_ropercenter ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_rosetta ... NOTE * checking Rd cross-references ... NOTE rdepends_rUM ... OK rdepends_sampleVADIR ... OK rdepends_text ... OK rdepends_tfrmtbuilder ... OK rdepends_ufs ... NOTE * checking Rd cross-references ... NOTE rdepends_welo ... OK