* installing *source* package ‘ribiosIO’ ...
** this is package ‘ribiosIO’ version ‘1.1.0’
** using staged installation
** libs
using C compiler: ‘Debian clang version 21.1.8 (1+b1)’
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c array.c -o array.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c format.c -o format.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c hlrmisc.c -o hlrmisc.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c linestream.c -o linestream.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c log.c -o log.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c plabla.c -o plabla.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c read_biokit_exprs.c -o read_biokit_exprs.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c read_chip.c -o read_chip.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c read_gct.c -o read_gct.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c read_gmt.c -o read_gmt.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -I../inst/include -I../inst/include/bios_headers -fpic  -g -O3 -Wall -pedantic -c write_gmt.c -o write_gmt.o
clang-21 -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o ribiosIO.so array.o format.o hlrmisc.o init.o linestream.o log.o plabla.o read_biokit_exprs.o read_chip.o read_gct.o read_gmt.o write_gmt.o -L/home/hornik/tmp/R-d-clang-21/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/ribiosIO.Rcheck/00LOCK-ribiosIO/00new/ribiosIO/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ribiosIO)