* using log directory 'd:/RCompile/CRANincoming/R-devel/riAFTBART.Rcheck' * using R Under development (unstable) (2024-05-28 r86639 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'riAFTBART/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'riAFTBART' version '0.3.3' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Fengrui Zhang ' New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: Hu (10:520) Liangyuan (10:510) al (10:526) et (10:523) interpretable (10:257) CRAN repository db overrides: X-CRAN-Comment: Archived on 2024-01-12 as email to the maintainer is undeliverable. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'riAFTBART' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from Rd file 'var_select.Rd': var_select Code: function(M.burnin, M.keep, M.thin = 1, status, y.train, x.train, trt.train, x.test, trt.test, cluster.id, verbose = FALSE, n_permuate, alpha = 0.1, seed = NULL) Docs: function(M.burnin, M.keep, M.thin = 1, status, y.train, x.train, trt.train, x.test, trt.test, cluster.id, verbose = FALSE, n_permuate, alpha = 0.1) Argument names in code not in docs: seed * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking PDF version of manual ... [19s] OK * checking HTML version of manual ... OK * DONE Status: 1 WARNING, 2 NOTEs