downloading reverse dependencies ‘cabinets’, ‘Capsule’, ‘deps’, ‘dfeR’, ‘envDocument’, ‘grateful’, ‘guideR’, ‘jetpack’, ‘jetty’, ‘learnr’, ‘link2GI’, ‘madrat’, ‘pracpac’, ‘rang’, ‘rcompendium’, ‘rhino’, ‘rsconnect’, ‘rsf’, ‘rworkflows’, ‘shinylive’, ‘shinymgr’, ‘softbib’, ‘starter’, ‘tugboat’, ‘updater’, ‘worcs’, ‘attachment’, ‘BeeBDC’, ‘booklet’, ‘bundle’, ‘envsetup’, ‘golem’, ‘HaDeX’, ‘inlcolor’, ‘inlpubs’, ‘ino’, ‘logrx’, ‘mlr3batchmark’, ‘OmopViewer’, ‘pacs’, ‘rspm’, ‘scpoisson’, ‘shiny2docker’, ‘shinyquiz’, ‘shinyscholar’, ‘SimDesign’, ‘teal’, ‘tidytlg’, ‘TractorTsbox’, ‘weakARMA’, ‘webmap’, ‘whirl’ trying URL 'file:///data/Repositories/CRAN/src/contrib/cabinets_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/Capsule_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/deps_0.4.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dfeR_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/envDocument_2.4.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/grateful_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/guideR_0.9.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jetpack_0.5.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jetty_0.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/learnr_0.11.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/link2GI_0.7-2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/madrat_3.15.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pracpac_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rang_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rcompendium_1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rhino_1.11.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rsconnect_1.7.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rsf_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rworkflows_1.0.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinylive_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinymgr_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/softbib_0.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/starter_0.1.16.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tugboat_0.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/updater_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/worcs_0.1.19.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/attachment_0.4.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/BeeBDC_1.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/booklet_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bundle_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/envsetup_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/golem_0.5.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/HaDeX_1.2.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/inlcolor_1.0.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/inlpubs_1.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ino_1.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/logrx_0.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mlr3batchmark_0.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/OmopViewer_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pacs_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rspm_0.7.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/scpoisson_0.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shiny2docker_0.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinyquiz_0.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinyscholar_0.4.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SimDesign_2.22.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/teal_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tidytlg_0.11.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TractorTsbox_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/weakARMA_1.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/webmap_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/whirl_0.3.1.tar.gz' installing dependencies ‘altdoc’, ‘attachment’, ‘bdc’, ‘BiocPkgTools’, ‘biocViews’, ‘bonsai’, ‘box.linters’, ‘box.lsp’, ‘cffr’, ‘codemetar’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘connectapi’, ‘CoordinateCleaner’, ‘dockerfiler’, ‘DrugUtilisation’, ‘embed’, ‘emld’, ‘emoji’, ‘envnames’, ‘future.batchtools’, ‘fuzzr’, ‘galah’, ‘gargoyle’, ‘ggupset’, ‘glmpca’, ‘IncidencePrevalence’, ‘iNEXT’, ‘job’, ‘knitcitations’, ‘luz’, ‘magclass’, ‘MeasurementDiagnostics’, ‘missRanger’, ‘modules’, ‘MultiAssayExperiment’, ‘normalize’, ‘oeli’, ‘OmopSketch’, ‘optimizeR’, ‘papaja’, ‘pkgcache’, ‘pkgdepends’, ‘pkgsearch’, ‘portion’, ‘prereg’, ‘renv’, ‘rgnparser’, ‘rgrass’, ‘roxy.shinylive’, ‘RPushbullet’, ‘rstudioapi’, ‘shiny.fluent’, ‘shiny.react’, ‘shinyTree’, ‘shinyvalidate’, ‘SpadeR’, ‘stacks’, ‘survival’, ‘tarchetypes’, ‘taxadb’, ‘teal.code’, ‘teal.data’, ‘teal.logger’, ‘teal.reporter’, ‘teal.slice’, ‘teal.widgets’, ‘tesseract’, ‘TestFunctions’, ‘tidySEM’, ‘torchvision’, ‘Tplyr’, ‘unglue’, ‘vctrs’, ‘vetiver’, ‘ymlthis’, ‘zephyr’ also installing the dependencies ‘codemeta’, ‘tinylabels’, ‘rmdfiltr’, ‘potions’, ‘contentid’, ‘bundle’, ‘cereal’, ‘rapidoc’, ‘ContourFunctions’, ‘rlistings’, ‘rtables.officer’, ‘BiocBaseUtils’, ‘lzstring’ begin installing package ‘codemeta’ begin installing package ‘tinylabels’ begin installing package ‘rmdfiltr’ begin installing package ‘vctrs’ begin installing package ‘contentid’ begin installing package ‘rapidoc’ begin installing package ‘BiocBaseUtils’ begin installing package ‘lzstring’ begin installing package ‘modules’ begin installing package ‘rgrass’ begin installing package ‘magclass’ begin installing package ‘pkgsearch’ begin installing package ‘cffr’ begin installing package ‘box.lsp’ begin installing package ‘biocViews’ begin installing package ‘pkgcache’ begin installing package ‘prereg’ begin installing package ‘survival’ begin installing package ‘missRanger’ begin installing package ‘emld’ begin installing package ‘SpadeR’ begin installing package ‘torchvision’ begin installing package ‘envnames’ begin installing package ‘rstudioapi’ begin installing package ‘tesseract’ begin installing package ‘normalize’ begin installing package ‘portion’ begin installing package ‘glmpca’ * installing *source* package ‘rapidoc’ ... ** this is package ‘rapidoc’ version ‘9.3.4’ ** package ‘rapidoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rapidoc) begin installing package ‘gargoyle’ * installing *source* package ‘prereg’ ... ** this is package ‘prereg’ version ‘0.6.0’ ** package ‘prereg’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prereg) begin installing package ‘RPushbullet’ * installing *source* package ‘portion’ ... ** this is package ‘portion’ version ‘0.1.2’ ** package ‘portion’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (portion) begin installing package ‘teal.code’ * installing *source* package ‘BiocBaseUtils’ ... ** this is package ‘BiocBaseUtils’ version ‘1.12.0’ ** package ‘BiocBaseUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocBaseUtils) begin installing package ‘teal.logger’ * installing *source* package ‘rmdfiltr’ ... ** this is package ‘rmdfiltr’ version ‘0.1.5’ ** package ‘rmdfiltr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdfiltr) begin installing package ‘shinyvalidate’ * installing *source* package ‘normalize’ ... ** this is package ‘normalize’ version ‘0.1.2’ ** package ‘normalize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (normalize) begin installing package ‘unglue’ * installing *source* package ‘box.lsp’ ... ** this is package ‘box.lsp’ version ‘0.1.3’ ** package ‘box.lsp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (box.lsp) begin installing package ‘zephyr’ * installing *source* package ‘missRanger’ ... ** this is package ‘missRanger’ version ‘2.6.1’ ** package ‘missRanger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (missRanger) begin installing package ‘renv’ * installing *source* package ‘codemeta’ ... ** this is package ‘codemeta’ version ‘0.1.1’ ** package ‘codemeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemeta) * installing *source* package ‘modules’ ... ** this is package ‘modules’ version ‘0.13.0’ ** package ‘modules’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modules) * installing *source* package ‘tinylabels’ ... ** this is package ‘tinylabels’ version ‘0.2.5’ ** package ‘tinylabels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinylabels) * installing *source* package ‘contentid’ ... ** this is package ‘contentid’ version ‘0.0.19’ ** package ‘contentid’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (contentid) * installing *source* package ‘rstudioapi’ ... ** this is package ‘rstudioapi’ version ‘0.18.0’ ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstudioapi) begin installing package ‘altdoc’ begin installing package ‘job’ * installing *source* package ‘glmpca’ ... ** this is package ‘glmpca’ version ‘0.2.0’ ** package ‘glmpca’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmpca) * installing *source* package ‘envnames’ ... ** this is package ‘envnames’ version ‘0.4.1’ ** package ‘envnames’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptCSXjt/R.INSTALL30e34453cb3a31/envnames/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c address.c -o address.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o envnames.so address.o init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptCSXjt/R.INSTALL30e34453cb3a31/envnames/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-envnames/00new/envnames/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (envnames) * installing *source* package ‘RPushbullet’ ... ** this is package ‘RPushbullet’ version ‘0.3.5’ ** package ‘RPushbullet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RPushbullet) * installing *source* package ‘zephyr’ ... ** this is package ‘zephyr’ version ‘0.1.3’ ** package ‘zephyr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zephyr) * installing *source* package ‘unglue’ ... ** this is package ‘unglue’ version ‘0.1.0’ ** package ‘unglue’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (unglue) * installing *source* package ‘pkgsearch’ ... ** this is package ‘pkgsearch’ version ‘3.1.5’ ** package ‘pkgsearch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgsearch) * installing *source* package ‘emld’ ... ** this is package ‘emld’ version ‘0.5.3’ ** package ‘emld’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emld) * installing *source* package ‘teal.logger’ ... ** this is package ‘teal.logger’ version ‘0.4.1’ ** package ‘teal.logger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.logger) * installing *source* package ‘shinyvalidate’ ... ** this is package ‘shinyvalidate’ version ‘0.1.3’ ** package ‘shinyvalidate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyvalidate) * installing *source* package ‘gargoyle’ ... ** this is package ‘gargoyle’ version ‘0.0.1’ ** package ‘gargoyle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gargoyle) * installing *source* package ‘job’ ... ** this is package ‘job’ version ‘0.3.1’ ** package ‘job’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (job) * installing *source* package ‘rgrass’ ... ** this is package ‘rgrass’ version ‘0.5-3’ ** package ‘rgrass’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgrass) * installing *source* package ‘teal.code’ ... ** this is package ‘teal.code’ version ‘0.7.0’ ** package ‘teal.code’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.code) begin installing package ‘teal.data’ * installing *source* package ‘cffr’ ... ** this is package ‘cffr’ version ‘1.2.1’ ** package ‘cffr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cffr) * installing *source* package ‘altdoc’ ... ** this is package ‘altdoc’ version ‘0.7.0’ ** package ‘altdoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (altdoc) * installing *source* package ‘lzstring’ ... ** this is package ‘lzstring’ version ‘0.2.0’ ** package ‘lzstring’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpflrts6/R.INSTALL30e30152b03c67/lzstring/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c code.cpp -o code.o In file included from code.cpp:4: lz-string.h: In function ‘lzstring::string lzstring::decompressFromEncodedURIComponent(const string&)’: lz-string.h:549:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 549 | for (int i = 0; i < keyStrUriSafe.length(); ++i) baseReverseDic[keyStrUriSafe.at(i)] = i; | ~~^~~~~~~~~~~~~~~~~~~~~~~~ lz-string.h: In function ‘lzstring::string lzstring::decompressFromBase64(const string&)’: lz-string.h:574:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 574 | for (int i = 0; i < keyStrBase64.length(); ++i) baseReverseDic[keyStrBase64.at(i)] = i; | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o lzstring.so code.o cpp11.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpflrts6/R.INSTALL30e30152b03c67/lzstring/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-lzstring/00new/lzstring/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lzstring) * installing *source* package ‘magclass’ ... ** this is package ‘magclass’ version ‘6.13.2’ ** package ‘magclass’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading in method for ‘as.array’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘as.data.frame’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘as.magpie’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘as.magpie’ with signature ‘x="lpj"’: no definition for class “lpj” in method for ‘as.magpie’ with signature ‘x="LPJmLData"’: no definition for class “LPJmLData” in method for ‘as.magpie’ with signature ‘x="quitte"’: no definition for class “quitte” in method for ‘as.magpie’ with signature ‘x="tbl_df"’: no definition for class “tbl_df” in method for ‘as.magpie’ with signature ‘x="RasterBrick"’: no definition for class “RasterBrick” in method for ‘as.magpie’ with signature ‘x="RasterStack"’: no definition for class “RasterStack” in method for ‘as.magpie’ with signature ‘x="RasterLayer"’: no definition for class “RasterLayer” in method for ‘as.magpie’ with signature ‘x="SpatRaster"’: no definition for class “SpatRaster” in method for ‘as.magpie’ with signature ‘x="SpatVector"’: no definition for class “SpatVector” Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘magclass’ in method for ‘colMeans’ with signature ‘x="magpie"’: no definition for class “magpie” Creating a generic function for ‘colSums’ from package ‘base’ in package ‘magclass’ in method for ‘colSums’ with signature ‘x="magpie"’: no definition for class “magpie” Creating a generic function for ‘ifelse’ from package ‘base’ in package ‘magclass’ in method for ‘ifelse’ with signature ‘test="magpie"’: no definition for class “magpie” in method for ‘is.na’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘is.nan’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘is.infinite’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘is.finite’ with signature ‘x="magpie"’: no definition for class “magpie” in method for ‘log’ with signature ‘x="magpie"’: no definition for class “magpie” Creating a generic function for ‘logb’ from package ‘base’ in package ‘magclass’ in method for ‘logb’ with signature ‘x="magpie"’: no definition for class “magpie” Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘magclass’ Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘magclass’ Creating a generic function for ‘setNames’ from package ‘stats’ in package ‘magclass’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magclass) * installing *source* package ‘biocViews’ ... ** this is package ‘biocViews’ version ‘1.78.0’ ** package ‘biocViews’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (biocViews) * installing *source* package ‘teal.data’ ... ** this is package ‘teal.data’ version ‘0.8.0’ ** package ‘teal.data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.data) * installing *source* package ‘torchvision’ ... ** this is package ‘torchvision’ version ‘0.8.0’ ** package ‘torchvision’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (torchvision) * installing *source* package ‘tesseract’ ... ** this is package ‘tesseract’ version ‘5.2.4’ ** package ‘tesseract’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/leptonica Using PKG_LIBS=-ltesseract -larchive -lcurl Using CXX: g++-15 -std=gnu++17 ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRfulWy/R.INSTALL30e34e4e86334/tesseract/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/leptonica -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/leptonica -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c tesseract.cpp -o tesseract.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tesseract.so RcppExports.o tesseract.o -ltesseract -larchive -lcurl -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRfulWy/R.INSTALL30e34e4e86334/tesseract/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tesseract/00new/tesseract/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tesseract) * installing *source* package ‘pkgcache’ ... ** this is package ‘pkgcache’ version ‘2.2.4’ ** package ‘pkgcache’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8MeH5F/R.INSTALL30e3264320db88/pkgcache/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c errors.c -o errors.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lib.c -o lib.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c winfiles.c -o winfiles.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o pkgcache.so errors.o init.o lib.o winfiles.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8MeH5F/R.INSTALL30e3264320db88/pkgcache/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pkgcache/00new/pkgcache/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgcache) begin installing package ‘pkgdepends’ * installing *source* package ‘SpadeR’ ... ** this is package ‘SpadeR’ version ‘0.1.1’ ** package ‘SpadeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SpadeR) * installing *source* package ‘renv’ ... ** this is package ‘renv’ version ‘1.1.6’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/CRAN_recheck/Library/00LOCK-renv/00new/renv/libs' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c renv.c -o renv.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o renv.so renv.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/CRAN_recheck/Library/00LOCK-renv/00new/renv/libs' ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (renv) * installing *source* package ‘vctrs’ ... ** this is package ‘vctrs’ version ‘0.7.0’ ** package ‘vctrs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUhJcrZ/R.INSTALL30e30936ecb59c/vctrs/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep-lazy-character.c -o altrep-lazy-character.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep-rle.c -o altrep-rle.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep.c -o altrep.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arg-counter.c -o arg-counter.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arg.c -o arg.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assert.c -o assert.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bind.c -o bind.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c c.c -o c.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c callables.c -o callables.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c case-when.c -o case-when.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast-bare.c -o cast-bare.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast-dispatch.c -o cast-dispatch.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cast.c -o cast.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c compare.c -o compare.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c complete.c -o complete.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c conditions.c -o conditions.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dictionary.c -o dictionary.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dim.c -o dim.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c empty.c -o empty.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equal.c -o equal.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c expand.c -o expand.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fields.c -o fields.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fill.c -o fill.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c globals.c -o globals.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c group.c -o group.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c growable.c -o growable.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hash.c -o hash.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c if-else.c -o if-else.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c interval.c -o interval.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c list-combine.c -o list-combine.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c list-unchop.c -o list-unchop.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c match-joint.c -o match-joint.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c match.c -o match.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c missing.c -o missing.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c names.c -o names.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-collate.c -o order-collate.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-groups.c -o order-groups.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order-sortedness.c -o order-sortedness.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order.c -o order.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c parallel.c -o parallel.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly-op.c -o poly-op.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proxy-restore.c -o proxy-restore.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proxy.c -o proxy.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype-common.c -o ptype-common.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype.c -o ptype.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype2-dispatch.c -o ptype2-dispatch.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptype2.c -o ptype2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rank.c -o rank.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c recode.c -o recode.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rep.c -o rep.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlang-dev.c -o rlang-dev.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlang.c -o rlang.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c runs.c -o runs.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c set.c -o set.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shape.c -o shape.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c size-common.c -o size-common.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c size.c -o size.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-array.c -o slice-array.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-assign-array.c -o slice-assign-array.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-assign.c -o slice-assign.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-chop.c -o slice-chop.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice-interleave.c -o slice-interleave.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c slice.c -o slice.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c split.c -o split.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c subscript-loc.c -o subscript-loc.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c subscript.c -o subscript.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c translate.c -o translate.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-data-frame.c -o type-data-frame.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-date-time.c -o type-date-time.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-factor.c -o type-factor.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-info.c -o type-info.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-integer64.c -o type-integer64.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c type-tibble.c -o type-tibble.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c typeof2-s3.c -o typeof2-s3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c typeof2.c -o typeof2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c unspecified.c -o unspecified.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils-dispatch.c -o utils-dispatch.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c version.c -o version.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c.o callables.o case-when.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o if-else.o init.o interval.o list-combine.o list-unchop.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order.o parallel.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o recode.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o version.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUhJcrZ/R.INSTALL30e30936ecb59c/vctrs/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) begin installing package ‘potions’ begin installing package ‘bundle’ begin installing package ‘ContourFunctions’ begin installing package ‘rlistings’ begin installing package ‘emoji’ begin installing package ‘box.linters’ begin installing package ‘ggupset’ begin installing package ‘shiny.react’ begin installing package ‘iNEXT’ begin installing package ‘CoordinateCleaner’ begin installing package ‘rgnparser’ begin installing package ‘bonsai’ begin installing package ‘luz’ begin installing package ‘attachment’ begin installing package ‘dockerfiler’ begin installing package ‘oeli’ begin installing package ‘Tplyr’ begin installing package ‘CohortCharacteristics’ begin installing package ‘CohortConstructor’ begin installing package ‘IncidencePrevalence’ begin installing package ‘DrugUtilisation’ begin installing package ‘shinyTree’ begin installing package ‘knitcitations’ begin installing package ‘future.batchtools’ begin installing package ‘teal.widgets’ begin installing package ‘fuzzr’ * installing *source* package ‘fuzzr’ ... ** this is package ‘fuzzr’ version ‘0.2.2’ ** package ‘fuzzr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fuzzr) begin installing package ‘cereal’ * installing *source* package ‘shiny.react’ ... ** this is package ‘shiny.react’ version ‘0.4.0’ ** package ‘shiny.react’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.react) begin installing package ‘codemetar’ * installing *source* package ‘potions’ ... ** this is package ‘potions’ version ‘0.2.0’ ** package ‘potions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (potions) begin installing package ‘ymlthis’ * installing *source* package ‘bundle’ ... ** this is package ‘bundle’ version ‘0.1.3’ ** package ‘bundle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bundle) begin installing package ‘BiocPkgTools’ * installing *source* package ‘emoji’ ... ** this is package ‘emoji’ version ‘16.0.0’ ** package ‘emoji’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emoji) begin installing package ‘papaja’ * installing *source* package ‘attachment’ ... ** this is package ‘attachment’ version ‘0.4.5’ ** package ‘attachment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (attachment) begin installing package ‘tarchetypes’ * installing *source* package ‘rgnparser’ ... ** this is package ‘rgnparser’ version ‘0.3.0’ ** package ‘rgnparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgnparser) begin installing package ‘galah’ * installing *source* package ‘box.linters’ ... ** this is package ‘box.linters’ version ‘0.10.7’ ** package ‘box.linters’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (box.linters) begin installing package ‘taxadb’ * installing *source* package ‘cereal’ ... ** this is package ‘cereal’ version ‘0.1.0’ ** package ‘cereal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cereal) begin installing package ‘connectapi’ * installing *source* package ‘shinyTree’ ... ** this is package ‘shinyTree’ version ‘0.3.1’ ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) * installing *source* package ‘teal.widgets’ ... ** this is package ‘teal.widgets’ version ‘0.5.1’ ** package ‘teal.widgets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.widgets) begin installing package ‘shiny.fluent’ begin installing package ‘MultiAssayExperiment’ * installing *source* package ‘knitcitations’ ... ** this is package ‘knitcitations’ version ‘1.0.12’ ** package ‘knitcitations’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitcitations) begin installing package ‘roxy.shinylive’ * installing *source* package ‘dockerfiler’ ... ** this is package ‘dockerfiler’ version ‘0.2.5’ ** package ‘dockerfiler’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dockerfiler) begin installing package ‘vetiver’ * installing *source* package ‘future.batchtools’ ... ** this is package ‘future.batchtools’ version ‘0.21.0’ ** package ‘future.batchtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (future.batchtools) begin installing package ‘teal.slice’ * installing *source* package ‘rlistings’ ... ** this is package ‘rlistings’ version ‘0.2.13’ ** package ‘rlistings’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlistings) begin installing package ‘rtables.officer’ * installing *source* package ‘codemetar’ ... ** this is package ‘codemetar’ version ‘0.3.6’ ** package ‘codemetar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemetar) * installing *source* package ‘ggupset’ ... ** this is package ‘ggupset’ version ‘0.4.1’ ** package ‘ggupset’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggupset) * installing *source* package ‘ymlthis’ ... ** this is package ‘ymlthis’ version ‘0.1.7’ ** package ‘ymlthis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ymlthis) * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.1’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.1.0’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) * installing *source* package ‘ContourFunctions’ ... ** this is package ‘ContourFunctions’ version ‘0.1.2’ ** package ‘ContourFunctions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ContourFunctions) begin installing package ‘TestFunctions’ * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘1.0.5’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘bonsai’ ... ** this is package ‘bonsai’ version ‘0.4.0’ ** package ‘bonsai’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bonsai) * installing *source* package ‘roxy.shinylive’ ... ** this is package ‘roxy.shinylive’ version ‘1.0.0’ ** package ‘roxy.shinylive’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (roxy.shinylive) * installing *source* package ‘shiny.fluent’ ... ** this is package ‘shiny.fluent’ version ‘0.4.0’ ** package ‘shiny.fluent’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.fluent) * installing *source* package ‘survival’ ... ** this is package ‘survival’ version ‘3.8-6’ ** package ‘survival’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpsb57h4/R.INSTALL30e3427ee1adb2/survival/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agexact.c -o agexact.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agfit4.c -o agfit4.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agfit5.c -o agfit5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agmart.c -o agmart.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agmart3.c -o agmart3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agscore2.c -o agscore2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agscore3.c -o agscore3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agsurv4.c -o agsurv4.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agsurv5.c -o agsurv5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cdecomp.c -o cdecomp.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chinv2.c -o chinv2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chinv3.c -o chinv3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cholesky2.c -o cholesky2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cholesky3.c -o cholesky3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cholesky5.c -o cholesky5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chsolve2.c -o chsolve2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chsolve3.c -o chsolve3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chsolve5.c -o chsolve5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c collapse.c -o collapse.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c concordance1.c -o concordance1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c concordance3.c -o concordance3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c concordance5.c -o concordance5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cox_Rcallback.c -o cox_Rcallback.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxcount1.c -o coxcount1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxdetail.c -o coxdetail.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxexact.c -o coxexact.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxfit5.c -o coxfit5.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxfit6.c -o coxfit6.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxmart.c -o coxmart.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxmart2.c -o coxmart2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxph_wtest.c -o coxph_wtest.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxsafe.c -o coxsafe.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxscho.c -o coxscho.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxscore2.c -o coxscore2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxsurv1.c -o coxsurv1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxsurv2.c -o coxsurv2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxsurv3.c -o coxsurv3.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coxsurv4.c -o coxsurv4.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dmatrix.c -o dmatrix.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c doloop.c -o doloop.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fastkm.c -o fastkm.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c finegray.c -o finegray.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gchol.c -o gchol.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c multicheck.c -o multicheck.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c norisk.c -o norisk.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pyears1.c -o pyears1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pyears2.c -o pyears2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pyears3b.c -o pyears3b.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pystep.c -o pystep.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c residcsum.c -o residcsum.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survConcordance.c -o survConcordance.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survdiff2.c -o survdiff2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survfit4.c -o survfit4.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survfitaj.c -o survfitaj.o survfitaj.c: In function ‘survfitaj’: survfitaj.c:510:21: warning: ‘stdp’ may be used uninitialized [-Wmaybe-uninitialized] 510 | stdp[j][i] = se1[j]; | ~~~~^~~ survfitaj.c:96:14: note: ‘stdp’ was declared here 96 | double **stdp, **stdc, **stda; | ^~~~ survfitaj.c:517:32: warning: ‘stdc’ may be used uninitialized [-Wmaybe-uninitialized] 517 | if (sefit > 0) stdc[jk][i] = se2[jk]; | ~~~~^~~~ survfitaj.c:96:23: note: ‘stdc’ was declared here 96 | double **stdp, **stdc, **stda; | ^~~~ survfitaj.c:511:21: warning: ‘stda’ may be used uninitialized [-Wmaybe-uninitialized] 511 | stda[j][i] = se3[j]; | ~~~~^~~ survfitaj.c:96:31: note: ‘stda’ was declared here 96 | double **stdp, **stdc, **stda; | ^~~~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survfitkm.c -o survfitkm.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survfitresid.c -o survfitresid.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survpenal.c -o survpenal.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survreg6.c -o survreg6.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survreg7.c -o survreg7.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survregc1.c -o survregc1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survregc2.c -o survregc2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c survsplit.c -o survsplit.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tmerge.c -o tmerge.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c twoclust.c -o twoclust.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c zph1.c -o zph1.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c zph2.c -o zph2.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agscore3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o coxsurv3.o coxsurv4.o dmatrix.o doloop.o fastkm.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o residcsum.o survConcordance.o survdiff2.o survfit4.o survfitaj.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o twoclust.o zph1.o zph2.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpsb57h4/R.INSTALL30e3427ee1adb2/survival/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-survival/00new/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survival) begin installing package ‘tidySEM’ begin installing package ‘embed’ begin installing package ‘stacks’ begin installing package ‘CohortSurvival’ * installing *source* package ‘taxadb’ ... ** this is package ‘taxadb’ version ‘0.2.1’ ** package ‘taxadb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxadb) * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.6.1’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) begin installing package ‘MeasurementDiagnostics’ begin installing package ‘OmopSketch’ * installing *source* package ‘Tplyr’ ... ** this is package ‘Tplyr’ version ‘1.2.1’ ** package ‘Tplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Tplyr) * installing *source* package ‘pkgdepends’ ... ** this is package ‘pkgdepends’ version ‘0.9.0’ ** package ‘pkgdepends’ successfully unpacked and MD5 sums checked ** using staged installation *** Running ./configure ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpS6XOCd/R.INSTALL30ed0f2d342faf/pkgdepends/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/lib/src/lib.c -o tree-sitter/lib/src/lib.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/r/parser.c -o tree-sitter/r/parser.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/r/scanner.c -o tree-sitter/r/scanner.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/markdown/parser.c -o tree-sitter/markdown/parser.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/markdown/scanner.c -o tree-sitter/markdown/scanner.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/markdown-inline/parser.c -o tree-sitter/markdown-inline/parser.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/markdown-inline/scanner.c -o tree-sitter/markdown-inline/scanner.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/yaml/parser.c -o tree-sitter/yaml/parser.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter/yaml/scanner.c -o tree-sitter/yaml/scanner.o In file included from tree-sitter/yaml/scanner.c:1: tree-sitter/yaml/scanner.c: In function ‘pop_ind’: tree-sitter/yaml/tree_sitter/array.h:106:42: warning: value computed is not used [-Wunused-value] 106 | #define array_pop(self) ((self)->contents[--(self)->size]) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ tree-sitter/yaml/scanner.c:256:5: note: in expansion of macro ‘array_pop’ 256 | array_pop(&scanner->ind_len_stk); | ^~~~~~~~~ tree-sitter/yaml/tree_sitter/array.h:106:42: warning: value computed is not used [-Wunused-value] 106 | #define array_pop(self) ((self)->contents[--(self)->size]) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ tree-sitter/yaml/scanner.c:257:5: note: in expansion of macro ‘array_pop’ 257 | array_pop(&scanner->ind_typ_stk); | ^~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/api.c -o yaml/api.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/dumper.c -o yaml/dumper.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/emitter.c -o yaml/emitter.o yaml/emitter.c: In function ‘yaml_emitter_write_plain_scalar’: yaml/emitter.c:28:6: warning: value computed is not used [-Wunused-value] 28 | && ((emitter->line_break == YAML_CR_BREAK ? \ | ^~ yaml/emitter.c:56:11: note: in expansion of macro ‘PUT_BREAK’ 56 | (PUT_BREAK(emitter), \ | ^~~~~~~~~ yaml/emitter.c:1962:18: note: in expansion of macro ‘WRITE_BREAK’ 1962 | if (!WRITE_BREAK(emitter, string)) return 0; | ^~~~~~~~~~~ yaml/emitter.c: In function ‘yaml_emitter_write_single_quoted_scalar’: yaml/emitter.c:28:6: warning: value computed is not used [-Wunused-value] 28 | && ((emitter->line_break == YAML_CR_BREAK ? \ | ^~ yaml/emitter.c:56:11: note: in expansion of macro ‘PUT_BREAK’ 56 | (PUT_BREAK(emitter), \ | ^~~~~~~~~ yaml/emitter.c:2019:18: note: in expansion of macro ‘WRITE_BREAK’ 2019 | if (!WRITE_BREAK(emitter, string)) return 0; | ^~~~~~~~~~~ yaml/emitter.c: In function ‘yaml_emitter_write_literal_scalar’: yaml/emitter.c:28:6: warning: value computed is not used [-Wunused-value] 28 | && ((emitter->line_break == YAML_CR_BREAK ? \ | ^~ yaml/emitter.c:56:11: note: in expansion of macro ‘PUT_BREAK’ 56 | (PUT_BREAK(emitter), \ | ^~~~~~~~~ yaml/emitter.c:2285:18: note: in expansion of macro ‘WRITE_BREAK’ 2285 | if (!WRITE_BREAK(emitter, string)) return 0; | ^~~~~~~~~~~ yaml/emitter.c: In function ‘yaml_emitter_write_folded_scalar’: yaml/emitter.c:28:6: warning: value computed is not used [-Wunused-value] 28 | && ((emitter->line_break == YAML_CR_BREAK ? \ | ^~ yaml/emitter.c:56:11: note: in expansion of macro ‘PUT_BREAK’ 56 | (PUT_BREAK(emitter), \ | ^~~~~~~~~ yaml/emitter.c:2334:18: note: in expansion of macro ‘WRITE_BREAK’ 2334 | if (!WRITE_BREAK(emitter, string)) return 0; | ^~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/loader.c -o yaml/loader.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/parser.c -o yaml/parser.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/reader.c -o yaml/reader.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/scanner.c -o yaml/scanner.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml/writer.c -o yaml/writer.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cleancall.c -o cleancall.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree-sitter.c -o tree-sitter.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./tree-sitter/lib/include -I./tree-sitter/lib/src -I./yaml -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yaml.c -o yaml.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o pkgdepends.so tree-sitter/lib/src/lib.o tree-sitter/r/parser.o tree-sitter/r/scanner.o tree-sitter/markdown/parser.o tree-sitter/markdown/scanner.o tree-sitter/markdown-inline/parser.o tree-sitter/markdown-inline/scanner.o tree-sitter/yaml/parser.o tree-sitter/yaml/scanner.o yaml/api.o yaml/dumper.o yaml/emitter.o yaml/loader.o yaml/parser.o yaml/reader.o yaml/scanner.o yaml/writer.o init.o cleancall.o tree-sitter.o yaml.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpS6XOCd/R.INSTALL30ed0f2d342faf/pkgdepends/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-pkgdepends/00new/pkgdepends/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgdepends) * installing *source* package ‘vetiver’ ... ** this is package ‘vetiver’ version ‘0.2.7’ ** package ‘vetiver’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vetiver) * installing *source* package ‘rtables.officer’ ... ** this is package ‘rtables.officer’ version ‘0.1.2’ ** package ‘rtables.officer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rtables.officer) begin installing package ‘teal.reporter’ * installing *source* package ‘MeasurementDiagnostics’ ... ** this is package ‘MeasurementDiagnostics’ version ‘0.2.0’ ** package ‘MeasurementDiagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MeasurementDiagnostics) * installing *source* package ‘luz’ ... ** this is package ‘luz’ version ‘0.5.1’ ** package ‘luz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (luz) * installing *source* package ‘papaja’ ... ** this is package ‘papaja’ version ‘0.1.4’ ** package ‘papaja’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (papaja) * installing *source* package ‘tarchetypes’ ... ** this is package ‘tarchetypes’ version ‘0.13.2’ ** package ‘tarchetypes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tarchetypes) * installing *source* package ‘TestFunctions’ ... ** this is package ‘TestFunctions’ version ‘0.2.2’ ** package ‘TestFunctions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TestFunctions) * installing *source* package ‘galah’ ... ** this is package ‘galah’ version ‘2.1.2’ ** package ‘galah’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (galah) * installing *source* package ‘CohortSurvival’ ... ** this is package ‘CohortSurvival’ version ‘1.1.0’ ** package ‘CohortSurvival’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortSurvival) * installing *source* package ‘BiocPkgTools’ ... ** this is package ‘BiocPkgTools’ version ‘1.27.12’ ** package ‘BiocPkgTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocPkgTools) * installing *source* package ‘iNEXT’ ... ** this is package ‘iNEXT’ version ‘3.0.2’ ** package ‘iNEXT’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcprRpC/R.INSTALL30efda40679bd/iNEXT/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c subfuns.cpp -o subfuns.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o iNEXT.so RcppExports.o subfuns.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcprRpC/R.INSTALL30efda40679bd/iNEXT/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-iNEXT/00new/iNEXT/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iNEXT) * installing *source* package ‘connectapi’ ... ** this is package ‘connectapi’ version ‘0.10.0’ ** package ‘connectapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (connectapi) * installing *source* package ‘OmopSketch’ ... ** this is package ‘OmopSketch’ version ‘1.0.0’ ** package ‘OmopSketch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopSketch) * installing *source* package ‘stacks’ ... ** this is package ‘stacks’ version ‘1.1.1’ ** package ‘stacks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stacks) * installing *source* package ‘embed’ ... ** this is package ‘embed’ version ‘1.2.1’ ** package ‘embed’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (embed) * installing *source* package ‘teal.reporter’ ... ** this is package ‘teal.reporter’ version ‘0.6.0’ ** package ‘teal.reporter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.reporter) * installing *source* package ‘teal.slice’ ... ** this is package ‘teal.slice’ version ‘0.7.1’ ** package ‘teal.slice’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (teal.slice) * installing *source* package ‘CoordinateCleaner’ ... ** this is package ‘CoordinateCleaner’ version ‘3.0.1’ ** package ‘CoordinateCleaner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CoordinateCleaner) begin installing package ‘bdc’ * installing *source* package ‘tidySEM’ ... ** this is package ‘tidySEM’ version ‘0.2.10’ ** package ‘tidySEM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidySEM) * installing *source* package ‘MultiAssayExperiment’ ... ** this is package ‘MultiAssayExperiment’ version ‘1.36.1’ ** package ‘MultiAssayExperiment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultiAssayExperiment) * installing *source* package ‘bdc’ ... ** this is package ‘bdc’ version ‘1.1.5’ ** package ‘bdc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bdc) * installing *source* package ‘oeli’ ... ** this is package ‘oeli’ version ‘0.7.5’ ** package ‘oeli’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBLcHMR/R.INSTALL30f0013c265386/oeli/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dirichlet.cpp -o dirichlet.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c internal.cpp -o internal.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mixnorm.cpp -o mixnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mvnorm.cpp -o mvnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-dirichlet.cpp -o test-dirichlet.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-mixnorm.cpp -o test-mixnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-mvnorm.cpp -o test-mvnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-runner.cpp -o test-runner.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-tnorm.cpp -o test-tnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c test-wishart.cpp -o test-wishart.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c tnorm.cpp -o tnorm.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/mvtnorm/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c wishart.cpp -o wishart.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o oeli.so RcppExports.o dirichlet.o internal.o mixnorm.o mvnorm.o test-dirichlet.o test-mixnorm.o test-mvnorm.o test-runner.o test-tnorm.o test-wishart.o tnorm.o wishart.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBLcHMR/R.INSTALL30f0013c265386/oeli/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-oeli/00new/oeli/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (oeli) begin installing package ‘optimizeR’ * installing *source* package ‘optimizeR’ ... ** this is package ‘optimizeR’ version ‘1.2.1’ ** package ‘optimizeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (optimizeR) checking renv_1.1.6.tar.gz ... checking Capsule_0.2.0.tar.gz ... checking cabinets_0.6.0.tar.gz ... checking deps_0.4.1.tar.gz ... checking dfeR_1.0.1.tar.gz ... checking envDocument_2.4.2.tar.gz ... checking grateful_0.3.0.tar.gz ... checking guideR_0.9.0.tar.gz ... checking jetty_0.2.2.tar.gz ... checking jetpack_0.5.5.tar.gz ... checking learnr_0.11.6.tar.gz ... checking link2GI_0.7-2.tar.gz ... checking madrat_3.15.6.tar.gz ... checking pracpac_0.2.0.tar.gz ... checking rcompendium_1.4.tar.gz ... checking rang_0.3.0.tar.gz ... checking rhino_1.11.0.tar.gz ... checking rsconnect_1.7.0.tar.gz ... checking rsf_0.3.0.tar.gz ... checking rworkflows_1.0.8.tar.gz ... checking shinylive_0.3.0.tar.gz ... checking shinymgr_1.1.0.tar.gz ... checking softbib_0.0.2.tar.gz ... checking starter_0.1.16.tar.gz ... checking tugboat_0.1.5.tar.gz ... checking updater_0.1.2.tar.gz ... checking worcs_0.1.19.tar.gz ... checking attachment_0.4.5.tar.gz ... checking weakARMA_1.0.3.tar.gz ... checking SimDesign_2.22.tar.gz ... checking logrx_0.4.0.tar.gz ... checking whirl_0.3.1.tar.gz ... checking envsetup_0.3.0.tar.gz ... checking booklet_1.0.0.tar.gz ... checking inlcolor_1.0.6.tar.gz ... checking tidytlg_0.11.0.tar.gz ... checking shinyquiz_0.0.1.tar.gz ... checking HaDeX_1.2.3.tar.gz ... checking rspm_0.7.0.tar.gz ... checking bundle_0.1.3.tar.gz ... checking scpoisson_0.0.2.tar.gz ... checking webmap_1.1.1.tar.gz ... checking shiny2docker_0.0.3.tar.gz ... checking TractorTsbox_0.1.1.tar.gz ... checking inlpubs_1.3.0.tar.gz ... checking OmopViewer_0.6.0.tar.gz ... checking golem_0.5.1.tar.gz ... checking shinyscholar_0.4.3.tar.gz ... checking mlr3batchmark_0.2.2.tar.gz ... checking ino_1.2.0.tar.gz ... checking teal_1.1.0.tar.gz ... checking pacs_0.6.0.tar.gz ... checking BeeBDC_1.3.2.tar.gz ... Depends: Package: renv Imports: utils Timings: user system elapsed renv 275.806 26.745 219.353 Results: Check status summary: OK Source packages 1 Reverse depends 52 Check results summary: renv ... OK rdepends_attachment ... OK rdepends_BeeBDC ... OK rdepends_booklet ... OK rdepends_bundle ... OK rdepends_cabinets ... OK rdepends_Capsule ... OK rdepends_deps ... OK rdepends_dfeR ... OK rdepends_envDocument ... OK rdepends_envsetup ... OK rdepends_golem ... OK rdepends_grateful ... OK rdepends_guideR ... OK rdepends_HaDeX ... OK rdepends_inlcolor ... OK rdepends_inlpubs ... OK rdepends_ino ... OK rdepends_jetpack ... OK rdepends_jetty ... OK rdepends_learnr ... OK rdepends_link2GI ... OK rdepends_logrx ... OK rdepends_madrat ... OK rdepends_mlr3batchmark ... OK rdepends_OmopViewer ... OK rdepends_pacs ... OK rdepends_pracpac ... OK rdepends_rang ... OK rdepends_rcompendium ... OK rdepends_rhino ... OK rdepends_rsconnect ... OK rdepends_rsf ... OK rdepends_rspm ... OK rdepends_rworkflows ... OK rdepends_scpoisson ... OK rdepends_shiny2docker ... OK rdepends_shinylive ... OK rdepends_shinymgr ... OK rdepends_shinyquiz ... OK rdepends_shinyscholar ... OK rdepends_SimDesign ... OK rdepends_softbib ... OK rdepends_starter ... OK rdepends_teal ... OK rdepends_tidytlg ... OK rdepends_TractorTsbox ... OK rdepends_tugboat ... OK rdepends_updater ... OK rdepends_weakARMA ... OK rdepends_webmap ... OK rdepends_whirl ... OK rdepends_worcs ... OK