1 The SAS System 23:48 Wednesday, April 1, 2020 NOTE: Copyright (c) 2016 by SAS Institute Inc., Cary, NC, USA. NOTE: SAS (r) Proprietary Software 9.4 (TS1M5) Licensed to BRIGHAM & WOMENS HSPTL-DIV OF PREVENTATIVE MED-T&R, Site 70122551. NOTE: This session is executing on the Linux 2.6.32-754.23.1.el6.x86_64 (LIN X64) platform. NOTE: Updated analytical products: SAS/STAT 14.3 SAS/ETS 14.3 SAS/OR 14.3 SAS/IML 14.3 SAS/QC 14.3 NOTE: Additional host information: Linux LIN X64 2.6.32-754.23.1.el6.x86_64 #1 SMP Tue Sep 17 09:46:55 EDT 2019 x86_64 Red Hat Enterprise Linux Server release 6.10 (Santiago) You are running SAS 9. Some SAS 8 files will be automatically converted by the V9 engine; others are incompatible. Please see http://support.sas.com/rnd/migration/planning/platform/64bit.html PROC MIGRATE will preserve current SAS file attributes and is recommended for converting all your SAS libraries from any SAS 8 release to SAS 9. For details and examples, please see http://support.sas.com/rnd/migration/index.html This message is contained in the SAS news file, and is presented upon initialization. Edit the file "news" in the "misc/base" directory to display site-specific news and information in the program log. The command line option "-nonews" will prevent this display. NOTE: SAS initialization used: real time 0.05 seconds cpu time 0.04 seconds 1 /**/ 2 /** */ 3 /* */ 4 /* Created on 2020-03-08 */ 5 /**/ 6 7 /** Set libname */ 8 libname w './'; NOTE: Libref W was successfully assigned as follows: Engine: V9 Physical Name: /inv/kyoshida/cantos_stats/regmedint/tests/reference_results 9 10 /* Load SAS macro */ 11 %include './mediation.sas'; 4350 4351 /* Load data */ 2 The SAS System 23:48 Wednesday, April 1, 2020 4352 %include './data-valeri-vanderweele-2015.sas'; NOTE: The data set WORK.DATA has 100 observations and 6 variables. NOTE: DATA statement used (Total process time): real time 0.00 seconds cpu time 0.01 seconds 4457 4458 /* Invoke macro */ 4459 %mediation( 4460 data = data, 4461 yvar = y, 4462 avar = x, 4463 mvar = m, 4464 cvar = c, 4465 a0 = 0, 4466 a1 = 1, 4467 m = 1, 4468 yreg = survAFT_exp, 4469 mreg = logistic, 4470 interaction = true, 4471 casecontrol = false, 4472 output = full, 4473 c = 0.5, 4474 boot = , 4475 cens = cens); There are 1 confounders in the string "c" NOTE: There were 100 observations read from the data set WORK.DATA. NOTE: The data set WORK.DATA1 has 100 observations and 5 variables. NOTE: DATA statement used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: There were 100 observations read from the data set WORK.DATA1. NOTE: The data set WORK.DATA1 has 100 observations and 6 variables. NOTE: DATA statement used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: There were 100 observations read from the data set WORK.DATA1. NOTE: The data set WORK.DATA21 has 1 observations and 3 variables. NOTE: PROCEDURE MEANS used (Total process time): real time 0.01 seconds cpu time 0.02 seconds NOTE: There were 1 observations read from the data set WORK.DATA21. NOTE: The data set WORK.DATA21 has 1 observations and 1 variables. NOTE: DATA statement used (Total process time): real time 0.00 seconds cpu time 0.00 seconds 3 The SAS System 23:48 Wednesday, April 1, 2020 NOTE: IML Ready NOTE: Exiting IML. NOTE: The data set WORK.DATA2NEW1 has 1 observations and 1 variables. NOTE: PROCEDURE IML used (Total process time): real time 0.02 seconds cpu time 0.03 seconds NOTE: Appending WORK.DATA2NEW1 to WORK.DATA3. NOTE: BASE data set does not exist. DATA file is being copied to BASE file. NOTE: There were 1 observations read from the data set WORK.DATA2NEW1. NOTE: The data set WORK.DATA3 has 1 observations and 1 variables. NOTE: PROCEDURE APPEND used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: PROCEDURE SQL used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: IML Ready NOTE: Exiting IML. NOTE: The data set WORK.DATA2 has 1 observations and 1 variables. NOTE: PROCEDURE IML used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: The query requires remerging summary statistics back with the original data. WARNING: This CREATE TABLE statement recursively references the target table. A consequence of this is a possible data integrity problem. NOTE: Table WORK.DATA2 created, with 1 rows and 2 columns. NOTE: PROCEDURE SQL used (Total process time): real time 0.01 seconds cpu time 0.01 seconds NOTE: The query requires remerging summary statistics back with the original data. WARNING: This CREATE TABLE statement recursively references the target table. A consequence of this is a possible data integrity problem. NOTE: Table WORK.DATA2 created, with 1 rows and 3 columns. NOTE: PROCEDURE SQL used (Total process time): real time 0.01 seconds cpu time 0.00 seconds NOTE: Algorithm converged. NOTE: The data set WORK.GMCOVB has 6 observations and 7 variables. NOTE: The data set WORK.GMPARMS has 7 observations and 8 variables. NOTE: The PROCEDURE LIFEREG printed pages 1-2. NOTE: PROCEDURE LIFEREG used (Total process time): 4 The SAS System 23:48 Wednesday, April 1, 2020 real time 0.02 seconds cpu time 0.01 seconds NOTE: IML Ready NOTE: Exiting IML. NOTE: The data set WORK.OUT1 has 6 observations and 5 variables. NOTE: PROCEDURE IML used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: PROC LOGISTIC is modeling the probability that m=1. NOTE: Convergence criterion (GCONV=1E-8) satisfied. NOTE: There were 100 observations read from the data set WORK.DATA1. NOTE: The data set WORK.OUT2 has 4 observations and 4 variables. NOTE: The PROCEDURE LOGISTIC printed pages 3-4. NOTE: PROCEDURE LOGISTIC used (Total process time): real time 0.03 seconds cpu time 0.02 seconds NOTE: IML Ready ERROR: (execution) Matrices do not conform to the operation. operation : || at line 4459 column 1 operands : d1nde, d2nde, d3nde, d4nde, d5nde, d6nde, d7nde, d8nde d1nde 2 rows 1 col (numeric) 0.0245072 0.0242391 d2nde 2 rows 1 col (numeric) 0 0 d3nde 2 rows 2 cols (numeric) 0.022357 0 0.0221125 0 d4nde 1 row 1 col (numeric) 0 d5nde 1 row 1 col (numeric) 1 d6nde 2 rows 1 col (numeric) 0.0245072 0.0242391 d7nde 2 rows 1 col (numeric) 5 The SAS System 23:48 Wednesday, April 1, 2020 0.5205312 0.4591983 d8nde 1 row 1 col (numeric) 0 statement : ASSIGN at line 4459 column 1 ERROR: (execution) Matrices do not conform to the operation. operation : || at line 4459 column 1 operands : s, x, w, zero, t, s, h, z1 s 2 rows 1 col (numeric) 0.0234775 0.0243345 x 2 rows 1 col (numeric) 0.0234775 0.0243345 w 2 rows 2 cols (numeric) 0.0214177 0 0.0221995 0 zero 1 row 1 col (numeric) 0 t 1 row 1 col (numeric) 1 s 2 rows 1 col (numeric) 0.0234775 0.0243345 h 2 rows 1 col (numeric) 0.6145183 0.5549283 z1 1 row 1 col (numeric) 0 statement : ASSIGN at line 4459 column 1 ERROR: (execution) Matrices do not conform to the operation. operation : || at line 4459 column 1 operands : d1nie, d2nie, d3nie, d4nie, d5nie, d6nie, d7nie, d8nie d1nie 2 rows 1 col (numeric) 6 The SAS System 23:48 Wednesday, April 1, 2020 -0.001598 0.0006038 d2nie 2 rows 1 col (numeric) 0.0461 0.047514 d3nie 1 row 1 col (numeric) -0.001458 d4nie 1 row 1 col (numeric) 0 d5nie 1 row 1 col (numeric) 0 d6nie 2 rows 1 col (numeric) 0.0939872 0.09573 d7nie 2 rows 1 col (numeric) 0.0939872 0.09573 d8nie 1 row 1 col (numeric) 0 statement : ASSIGN at line 4459 column 1 ERROR: (execution) Matrices do not conform to the operation. operation : || at line 4459 column 1 operands : s, x, w, zero, zero, l, k, z1 s 2 rows 1 col (numeric) -0.000568 0.0005084 x 2 rows 1 col (numeric) 0.0226225 0.0231795 w 1 row 1 col (numeric) -0.000518 zero 1 row 1 col (numeric) 0 7 The SAS System 23:48 Wednesday, April 1, 2020 zero 1 row 1 col (numeric) 0 l 2 rows 1 col (numeric) 0.0950169 0.0956347 k 2 rows 1 col (numeric) 0 0 z1 1 row 1 col (numeric) 0 statement : ASSIGN at line 4459 column 1 ERROR: (execution) Matrices do not conform to the operation. operation : || at line 4459 column 1 operands : d1, d2, d3, d4, d5, d6, d7, z1 d1 2 rows 1 col (numeric) 0.0229095 0.0248429 d2 2 rows 1 col (numeric) 0.0461 0.047514 d3 2 rows 2 cols (numeric) 0.0208995 -0.001458 0.0206549 -0.001458 d4 1 row 1 col (numeric) 0 d5 1 row 1 col (numeric) 1 d6 2 rows 1 col (numeric) 0.1184943 0.1199692 d7 2 rows 1 col (numeric) 0.6145183 0.5549283 8 The SAS System 23:48 Wednesday, April 1, 2020 z1 1 row 1 col (numeric) 0 statement : ASSIGN at line 4459 column 1 NOTE: Exiting IML. NOTE: The data set WORK.EFFECT has 1 observations and 12 variables. NOTE: The data set WORK.SE has 1 observations and 12 variables. NOTE: The data set WORK.CIL has 1 observations and 12 variables. NOTE: The data set WORK.CIU has 1 observations and 12 variables. NOTE: The data set WORK.PVALUE has 1 observations and 12 variables. NOTE: The SAS System stopped processing this step because of errors. NOTE: SAS set option OBS=0 and will continue to check statements. This might cause NOTE: No observations in data set. NOTE: PROCEDURE IML used (Total process time): real time 0.04 seconds cpu time 0.03 seconds NOTE: IML Ready WARNING: IML is now in syntax-check-only mode due to errors in previous steps. No statements will be executed. NOTE: Exiting IML. NOTE: PROCEDURE IML used (Total process time): real time 0.00 seconds cpu time 0.00 seconds ERROR: File WORK.X4.DATA does not exist. ERROR: File WORK.X3.DATA does not exist. NOTE: The SAS System stopped processing this step because of errors. WARNING: The data set WORK.X5 may be incomplete. When this step was stopped there were 0 observations and 0 variables. NOTE: DATA statement used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: PROCEDURE PRINT used (Total process time): real time 0.00 seconds cpu time 0.00 seconds NOTE: PROCEDURE DATASETS used (Total process time): real time 0.00 seconds cpu time 0.01 seconds NOTE: PROCEDURE DATASETS used (Total process time): real time 0.00 seconds cpu time 0.00 seconds 9 The SAS System 23:48 Wednesday, April 1, 2020 NOTE: PROCEDURE DATASETS used (Total process time): real time 0.00 seconds cpu time 0.00 seconds 4476 run; NOTE: PROCEDURE DATASETS used (Total process time): real time 0.00 seconds cpu time 0.00 seconds ERROR: Errors printed on pages 4,5,6,7,8. NOTE: SAS Institute Inc., SAS Campus Drive, Cary, NC USA 27513-2414 NOTE: The SAS System used: real time 0.35 seconds cpu time 0.23 seconds