### Mediator model Call: glm(formula = bili_bin ~ trt + age + male + stage, family = binomial(link = "logit"), data = data) Coefficients: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.53024 0.85116 -1.798 0.07220 . trt -0.17117 0.25982 -0.659 0.51003 age -0.01386 0.01299 -1.067 0.28610 male 1.33046 0.43911 3.030 0.00245 ** stage 0.74640 0.16356 4.563 5.03e-06 *** --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 (Dispersion parameter for binomial family taken to be 1) Null deviance: 382.49 on 275 degrees of freedom Residual deviance: 349.60 on 271 degrees of freedom AIC: 359.6 Number of Fisher Scoring iterations: 4 ### Outcome model Call: survival::survreg(formula = Surv(time, status) ~ trt + bili_bin + trt:bili_bin + age + male + stage, data = data, dist = "exponential") Value Std. Error z p (Intercept) 11.62002 0.77950 14.91 < 2e-16 trt 0.02362 0.34933 0.07 0.946 bili_bin -1.57137 0.64097 -2.45 0.014 age -0.01781 0.00893 -1.99 0.046 male -0.02506 0.24292 -0.10 0.918 stage -0.51616 0.12792 -4.03 5.5e-05 trt:bili_bin 0.10439 0.40452 0.26 0.796 Scale fixed at 1 Exponential distribution Loglik(model)= -1155.4 Loglik(intercept only)= -1206.3 Chisq= 101.78 on 6 degrees of freedom, p= 1.1e-19 Number of Newton-Raphson Iterations: 5 n= 276 ### Mediation analysis est se Z p lower upper exp(est) cde 0.20372870 0.38584156 0.5280113 0.5974915 -0.5525069 0.9599643 1.225966 pnde 0.06248461 0.31214915 0.2001755 0.8413433 -0.5493165 0.6742857 1.064478 tnie 0.06404979 0.09763518 0.6560114 0.5118168 -0.1273116 0.2554112 1.066145 tnde 0.05762856 0.32610289 0.1767190 0.8597292 -0.5815214 0.6967785 1.059321 pnie 0.06890584 0.10411170 0.6618453 0.5080704 -0.1351493 0.2729610 1.071335 te 0.12653440 0.33611500 0.3764616 0.7065737 -0.5322389 0.7853077 1.134888 pm 0.52198982 1.23284039 0.4234042 0.6720004 -1.8943329 2.9383126 NA exp(lower) exp(upper) cde 0.5755053 2.611603 pnde 0.5773443 1.962631 tnie 0.8804592 1.290992 tnde 0.5590472 2.007276 pnie 0.8735854 1.313849 te 0.5872886 2.193082 pm NA NA Evaluated at: avar: trt a1 (intervened value of avar) = 2.3 a0 (reference value of avar) = 1.1 mvar: bili_bin m_cde (intervend value of mvar for cde) = 1.4 cvar: age male stage c_cond (covariate vector value) = 50 1 2 Note that effect estimates can vary over m_cde and c_cond values when interaction = TRUE. ### Re-evaluation at c_cond = cmean est se Z p lower upper exp(est) cde 0.20372870 0.38584156 0.5280113 0.5974915 -0.5525069 0.9599643 1.225966 pnde 0.05374012 0.33748365 0.1592377 0.8734816 -0.6077157 0.7151959 1.055210 tnie 0.05832358 0.08842856 0.6595559 0.5095388 -0.1149932 0.2316404 1.060058 tnde 0.04983449 0.34939511 0.1426308 0.8865818 -0.6349673 0.7346363 1.051097 pnie 0.06222921 0.09369111 0.6641955 0.5065652 -0.1214020 0.2458604 1.064206 te 0.11206370 0.35681844 0.3140636 0.7534727 -0.5872876 0.8114150 1.118584 pm 0.53442045 1.53398877 0.3483862 0.7275502 -2.4721423 3.5409832 NA exp(lower) exp(upper) cde 0.5755053 2.611603 pnde 0.5445935 2.044587 tnie 0.8913722 1.260666 tnde 0.5299528 2.084724 pnie 0.8856779 1.278721 te 0.5558329 2.251091 pm NA NA