### Mediator model Call: glm(formula = bili_bin ~ trt + age + male + stage, family = binomial(link = "logit"), data = data) Coefficients: Estimate Std. Error z value Pr(>|z|) (Intercept) -1.53024 0.85116 -1.798 0.07220 . trt -0.17117 0.25982 -0.659 0.51003 age -0.01386 0.01299 -1.067 0.28610 male 1.33046 0.43911 3.030 0.00245 ** stage 0.74640 0.16356 4.563 5.03e-06 *** --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 (Dispersion parameter for binomial family taken to be 1) Null deviance: 382.49 on 275 degrees of freedom Residual deviance: 349.60 on 271 degrees of freedom AIC: 359.6 Number of Fisher Scoring iterations: 4 ### Outcome model Call: glm(formula = spiders ~ trt + bili_bin + age + male + stage, family = poisson(link = "log"), data = data) Coefficients: Estimate Std. Error z value Pr(>|z|) (Intercept) -3.141587 0.665612 -4.720 2.36e-06 *** trt -0.122282 0.174156 -0.702 0.48259 bili_bin 0.706257 0.215332 3.280 0.00104 ** age -0.004515 0.009071 -0.498 0.61870 male -1.119239 0.456004 -2.454 0.01411 * stage 0.607282 0.138548 4.383 1.17e-05 *** --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 (Dispersion parameter for poisson family taken to be 1) Null deviance: 198.14 on 275 degrees of freedom Residual deviance: 161.34 on 270 degrees of freedom AIC: 333.34 Number of Fisher Scoring iterations: 5 ### Mediation analysis est se Z p lower upper cde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 pnde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 tnie -0.03231246 0.05067699 -0.6376160 0.5237237 -0.1316375 0.06701262 tnde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 pnie -0.03231246 0.05067699 -0.6376160 0.5237237 -0.1316375 0.06701262 te -0.17905105 0.21517220 -0.8321291 0.4053361 -0.6007808 0.24267871 pm 0.16748203 0.30271996 0.5532573 0.5800872 -0.4258382 0.76080225 exp(est) exp(lower) exp(upper) cde 0.8635197 0.5733006 1.300655 pnde 0.8635197 0.5733006 1.300655 tnie 0.9682040 0.8766587 1.069309 tnde 0.8635197 0.5733006 1.300655 pnie 0.9682040 0.8766587 1.069309 te 0.8360632 0.5483833 1.274659 pm NA NA NA Evaluated at: avar: trt a1 (intervened value of avar) = 2.3 a0 (reference value of avar) = 1.1 mvar: bili_bin m_cde (intervend value of mvar for cde) = 1.4 cvar: age male stage c_cond (covariate vector value) = 50 1 2 Note that effect estimates do not vary over m_cde and c_cond values when interaction = FALSE. ### Re-evaluation at c_cond = cmean est se Z p lower upper cde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 pnde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 tnie -0.03521846 0.05453535 -0.6457915 0.5184144 -0.1421058 0.07166886 tnde -0.14673859 0.20898674 -0.7021430 0.4825900 -0.5563451 0.26286790 pnie -0.03521846 0.05453535 -0.6457915 0.5184144 -0.1421058 0.07166886 te -0.18195705 0.21613422 -0.8418706 0.3998604 -0.6055723 0.24165824 pm 0.17962266 0.31763092 0.5655075 0.5717287 -0.4429225 0.80216782 exp(est) exp(lower) exp(upper) cde 0.8635197 0.5733006 1.300655 pnde 0.8635197 0.5733006 1.300655 tnie 0.9653945 0.8675295 1.074300 tnde 0.8635197 0.5733006 1.300655 pnie 0.9653945 0.8675295 1.074300 te 0.8336371 0.5457620 1.273359 pm NA NA NA