### Mediator model Call: lm(formula = bili ~ trt + age + male + stage, data = data) Residuals: Min 1Q Median 3Q Max -4.1854 -2.5979 -1.2638 0.5727 24.2813 Coefficients: Estimate Std. Error t value Pr(>|t|) (Intercept) -2.54577 1.76354 -1.444 0.150018 trt 0.60723 0.54646 1.111 0.267464 age 0.02419 0.02706 0.894 0.372025 male -0.61583 0.84467 -0.729 0.466584 stage 1.26164 0.32279 3.909 0.000117 *** --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 4.472 on 271 degrees of freedom Multiple R-squared: 0.06893, Adjusted R-squared: 0.05518 F-statistic: 5.016 on 4 and 271 DF, p-value: 0.0006483 ### Outcome model Call: survival::coxph(formula = Surv(time, status) ~ trt + bili + trt:bili + age + male + stage, data = data, ties = "efron") n= 276, number of events= 129 coef exp(coef) se(coef) z Pr(>|z|) trt -0.255954 0.774178 0.230550 -1.110 0.2669 bili 0.118784 1.126126 0.050981 2.330 0.0198 * age 0.007608 1.007637 0.009542 0.797 0.4253 male 0.501644 1.651435 0.240706 2.084 0.0372 * stage 0.688608 1.990941 0.130786 5.265 1.4e-07 *** trt:bili 0.012698 1.012779 0.028922 0.439 0.6606 --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 exp(coef) exp(-coef) lower .95 upper .95 trt 0.7742 1.2917 0.4927 1.216 bili 1.1261 0.8880 1.0190 1.244 age 1.0076 0.9924 0.9890 1.027 male 1.6514 0.6055 1.0303 2.647 stage 1.9909 0.5023 1.5408 2.573 trt:bili 1.0128 0.9874 0.9570 1.072 Concordance= 0.802 (se = 0.017 ) Likelihood ratio test= 118.1 on 6 df, p=<2e-16 Wald test = 136.8 on 6 df, p=<2e-16 Score (logrank) test = 185.8 on 6 df, p=<2e-16 ### Mediation analysis est se Z p lower upper cde -0.28581165 0.24948216 -1.1456196 0.2519526 -0.77478770 0.2031644 pnde -0.24547770 0.21931144 -1.1193110 0.2630075 -0.67532021 0.1843648 tnie 0.10783529 0.09843166 1.0955346 0.2732825 -0.08508722 0.3007578 tnde -0.23437447 0.21731490 -1.0785016 0.2808100 -0.66030385 0.1915549 pnie 0.09673207 0.08855204 1.0923754 0.2746681 -0.07682674 0.2702909 te -0.13764240 0.23688054 -0.5810625 0.5611983 -0.60191974 0.3266349 pm -0.69274197 1.60230279 -0.4323415 0.6654932 -3.83319774 2.4477138 exp(est) exp(lower) exp(upper) cde 0.7514041 0.4608016 1.225274 pnde 0.7823307 0.5089934 1.202454 tnie 1.1138643 0.9184322 1.350882 tnde 0.7910655 0.5166943 1.211131 pnie 1.1015652 0.9260503 1.310346 te 0.8714102 0.5477591 1.386295 pm NA NA NA Evaluated at: avar: trt a1 (intervened value of avar) = 2.3 a0 (reference value of avar) = 1.1 mvar: bili m_cde (intervend value of mvar for cde) = 1.4 cvar: age male stage c_cond (covariate vector value) = 50 1 2 Note that effect estimates can vary over m_cde and c_cond values when interaction = TRUE. ### Re-evaluation at c_cond = cmean est se Z p lower upper cde -0.28581165 0.24948216 -1.1456196 0.2519526 -0.77478770 0.2031644 pnde -0.21733314 0.21931098 -0.9909816 0.3216946 -0.64717477 0.2125085 tnie 0.10783529 0.09843166 1.0955346 0.2732825 -0.08508722 0.3007578 tnde -0.20622992 0.22460532 -0.9181881 0.3585204 -0.64644825 0.2339884 pnie 0.09673207 0.08855204 1.0923754 0.2746681 -0.07682674 0.2702909 te -0.10949785 0.23990732 -0.4564173 0.6480899 -0.57970755 0.3607119 pm -0.88339616 2.45436964 -0.3599279 0.7189010 -5.69387227 3.9270799 exp(est) exp(lower) exp(upper) cde 0.7514041 0.4608016 1.225274 pnde 0.8046619 0.5235228 1.236777 tnie 1.1138643 0.9184322 1.350882 tnde 0.8136460 0.5239033 1.263630 pnie 1.1015652 0.9260503 1.310346 te 0.8962841 0.5600621 1.434350 pm NA NA NA