### Mediator model Call: lm(formula = bili ~ trt + age + male + stage, data = data) Residuals: Min 1Q Median 3Q Max -4.1854 -2.5979 -1.2638 0.5727 24.2813 Coefficients: Estimate Std. Error t value Pr(>|t|) (Intercept) -2.54577 1.76354 -1.444 0.150018 trt 0.60723 0.54646 1.111 0.267464 age 0.02419 0.02706 0.894 0.372025 male -0.61583 0.84467 -0.729 0.466584 stage 1.26164 0.32279 3.909 0.000117 *** --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 Residual standard error: 4.472 on 271 degrees of freedom Multiple R-squared: 0.06893, Adjusted R-squared: 0.05518 F-statistic: 5.016 on 4 and 271 DF, p-value: 0.0006483 ### Outcome model Call: glm(formula = spiders ~ trt + bili + trt:bili + age + male + stage, family = binomial(link = "logit"), data = data) Coefficients: Estimate Std. Error z value Pr(>|z|) (Intercept) -3.26554 1.05861 -3.085 0.00204 ** trt -0.16094 0.38343 -0.420 0.67468 bili 0.15965 0.12465 1.281 0.20026 age -0.01226 0.01488 -0.824 0.40986 male -1.30553 0.58575 -2.229 0.02583 * stage 0.94331 0.21367 4.415 1.01e-05 *** trt:bili -0.04212 0.06929 -0.608 0.54323 --- Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 (Dispersion parameter for binomial family taken to be 1) Null deviance: 332.32 on 275 degrees of freedom Residual deviance: 283.20 on 269 degrees of freedom AIC: 297.2 Number of Fisher Scoring iterations: 4 ### Mediation analysis est se Z p lower upper cde -0.26389664 0.39750396 -0.6638843 0.5067644 -1.04299008 0.5151968 pnde -0.34478828 0.36756828 -0.9380251 0.3482315 -1.06520887 0.3756323 tnie 0.04573494 0.05456729 0.8381383 0.4019530 -0.06121499 0.1526849 tnde -0.38162130 0.36736085 -1.0388187 0.2988891 -1.10163533 0.3383927 pnie 0.08256796 0.08410901 0.9816780 0.3262585 -0.08228266 0.2474186 te -0.29905334 0.36530767 -0.8186342 0.4129952 -1.01504322 0.4169365 pm -0.12824792 0.23877021 -0.5371186 0.5911857 -0.59622893 0.3397331 exp(est) exp(lower) exp(upper) cde 0.7680529 0.3523994 1.673968 pnde 0.7083703 0.3446559 1.455912 tnie 1.0467969 0.9406210 1.164958 tnde 0.6827536 0.3323272 1.402691 pnie 1.0860725 0.9210116 1.280715 te 0.7415199 0.3623868 1.517306 pm NA NA NA Evaluated at: avar: trt a1 (intervened value of avar) = 2.3 a0 (reference value of avar) = 1.1 mvar: bili m_cde (intervend value of mvar for cde) = 1.4 cvar: age male stage c_cond (covariate vector value) = 50 1 2 Note that effect estimates can vary over m_cde and c_cond values when interaction = TRUE. ### Re-evaluation at c_cond = cmean est se Z p lower upper cde -0.26389664 0.39750396 -0.6638843 0.5067644 -1.04299008 0.5151968 pnde -0.43815298 0.38201322 -1.1469576 0.2513991 -1.18688514 0.3105792 tnie 0.04573494 0.05456729 0.8381383 0.4019530 -0.06121499 0.1526849 tnde -0.47498601 0.40517540 -1.1722973 0.2410777 -1.26911519 0.3191432 pnie 0.08256796 0.08410901 0.9816780 0.3262585 -0.08228266 0.2474186 te -0.39241804 0.39137851 -1.0026561 0.3160268 -1.15950583 0.3746697 pm -0.09302726 0.17370246 -0.5355552 0.5922660 -0.43347783 0.2474233 exp(est) exp(lower) exp(upper) cde 0.7680529 0.3523994 1.673968 pnde 0.6452271 0.3051703 1.364215 tnie 1.0467969 0.9406210 1.164958 tnde 0.6218938 0.2810802 1.375948 pnie 1.0860725 0.9210116 1.280715 te 0.6754217 0.3136411 1.454511 pm NA NA NA