* installing *source* package ‘redist’ ...
** this is package ‘redist’ version ‘4.3.2’
** using staged installation
** libs
specified C++17
using C++ compiler: ‘Debian clang version 21.1.8 (3)’
using C++17
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c adj_reduce.cpp -o adj_reduce.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c check_contiguity.cpp -o check_contiguity.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c coarsen.cpp -o coarsen.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c coloring.cpp -o coloring.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c compact_vectorized.cpp -o compact_vectorized.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c constraint_calc_helper.cpp -o constraint_calc_helper.o
constraint_calc_helper.cpp:124:22: warning: variable 'match' set but not used [-Wunused-but-set-variable]
  124 |   int i; int j; bool match; arma::uvec store_in(vec1.n_elem);
      |                      ^
1 warning generated.
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c contiguity.cpp -o contiguity.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c cores.cpp -o cores.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c crsg.cpp -o crsg.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c distance_helpers.cpp -o distance_helpers.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c kirchhoff.cpp -o kirchhoff.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c make_swaps_helper.cpp -o make_swaps_helper.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c map_calc.cpp -o map_calc.o
In file included from map_calc.cpp:2:
In file included from ./map_calc.h:4:
In file included from ./smc_base.h:10:
In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:32:
In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:26:
In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:29:
/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/r/check_r_headers.h:27:13: warning: R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
   27 |     #pragma message "R.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
      |             ^
/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/r/check_r_headers.h:35:13: warning: Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410 [-W#pragma-messages]
   35 |     #pragma message "Rinternals.h has been included before any Rcpp headers. This can lead to hard-to-debug errors, and is not necessary. See https://github.com/RcppCore/Rcpp/issues/1410"
      |             ^
2 warnings generated.
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c mcmc_gibbs.cpp -o mcmc_gibbs.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c merge_split.cpp -o merge_split.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c pareto.cpp -o pareto.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c pop_helpers.cpp -o pop_helpers.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c random.cpp -o random.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c renumber.cpp -o renumber.o
In file included from renumber.cpp:4:
./hungarian.h:177:25: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
  177 |                         for (row = 0; row<nOfRows; row++)
      |                         ^
./hungarian.h:169:21: note: previous statement is here
  169 |                     if (fabs(distMatrix[row + nOfRows*col]) < DBL_EPSILON)
      |                     ^
./hungarian.h:258:13: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  258 |             if (nOfCoveredColumns == minDim)
      |             ^
./hungarian.h:254:9: note: previous statement is here
  254 |         for (col = 0; col<nOfColumns; col++)
      |         ^
./hungarian.h:292:33: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  292 |                                 if (starCol == nOfColumns) /* no starred zero found */
      |                                 ^
./hungarian.h:288:29: note: previous statement is here
  288 |                             for (starCol = 0; starCol<nOfColumns; starCol++)
      |                             ^
./hungarian.h:330:13: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  330 |             while (starRow<nOfRows)
      |             ^
./hungarian.h:326:9: note: previous statement is here
  326 |         for (starRow = 0; starRow<nOfRows; starRow++)
      |         ^
./hungarian.h:342:21: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  342 |                     newStarMatrix[primeRow + nOfRows*primeCol] = true;
      |                     ^
./hungarian.h:337:17: note: previous statement is here
  337 |                 for (primeCol = 0; primeCol<nOfColumns; primeCol++)
      |                 ^
./hungarian.h:383:21: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  383 |                     for (row = 0; row<nOfRows; row++)
      |                     ^
./hungarian.h:374:17: note: previous statement is here
  374 |                 for (col = 0; col<nOfColumns; col++)
      |                 ^
./hungarian.h:389:25: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  389 |                         for (col = 0; col<nOfColumns; col++)
      |                         ^
./hungarian.h:383:21: note: previous statement is here
  383 |                     for (row = 0; row<nOfRows; row++)
      |                     ^
./hungarian.h:395:29: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  395 |                             step3(assignment, distMatrix, starMatrix, newStarMatrix, primeMatrix, coveredColumns, coveredRows, nOfRows, nOfColumns, minDim);
      |                             ^
./hungarian.h:389:25: note: previous statement is here
  389 |                         for (col = 0; col<nOfColumns; col++)
      |                         ^
8 warnings generated.
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c rsg.cpp -o rsg.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c scorer_helpers.cpp -o scorer_helpers.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c shatter_search.cpp -o shatter_search.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c smc.cpp -o smc.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c smc_base.cpp -o smc_base.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c splits.cpp -o splits.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c sw_mh_alg.cpp -o sw_mh_alg.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c sw_mh_helper.cpp -o sw_mh_helper.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c tree_op.cpp -o tree_op.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c varinfo.cpp -o varinfo.o
clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic   -c wilson.cpp -o wilson.o
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o redist.so RcppExports.o adj_reduce.o check_contiguity.o coarsen.o coloring.o compact_vectorized.o constraint_calc_helper.o contiguity.o cores.o crsg.o distance_helpers.o kirchhoff.o make_swaps_helper.o map_calc.o mcmc_gibbs.o merge_split.o pareto.o pop_helpers.o random.o renumber.o rsg.o scorer_helpers.o shatter_search.o smc.o smc_base.o splits.o sw_mh_alg.o sw_mh_helper.o tree_op.o varinfo.o wilson.o -latomic -lpthread -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R/lib -lR
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
installing to /srv/hornik/tmp/CRAN_pretest/redist.Rcheck/00LOCK-redist/00new/redist/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (redist)