* installing *source* package ‘redatam’ ... ** using staged installation Please specify at least one package name on the command line. Please specify at least one package name on the command line. ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/pugixml.cpp -o vendor/pugixml.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/readers/BitArrayReader.cpp -o redatamlib/readers/BitArrayReader.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/readers/ByteArrayReader.cpp -o redatamlib/readers/ByteArrayReader.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/entities/Entity.cpp -o redatamlib/entities/Entity.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/readers/FuzzyEntityParser.cpp -o redatamlib/readers/FuzzyEntityParser.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/readers/FuzzyVariableParser.cpp -o redatamlib/readers/FuzzyVariableParser.o In file included from /usr/include/c++/14/regex:50, from redatamlib/readers/FuzzyVariableParser.cpp:2: In constructor ‘std::function<_Res(_ArgTypes ...)>::function(std::function<_Res(_ArgTypes ...)>&&) [with _Res = bool; _ArgTypes = {char}]’, inlined from ‘std::__detail::_State<_Char_type>::_State(std::__detail::_State<_Char_type>&&) [with _Char_type = char]’ at /usr/include/c++/14/bits/regex_automaton.h:149:4, inlined from ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_repeat(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_automaton.h:263:24: /usr/include/c++/14/bits/std_function.h:405:42: warning: ‘*(std::function*)((char*)&__tmp + offsetof(std::__detail::_StateT, std::__detail::_State::.std::__detail::_State_base::)).std::function::_M_invoker’ may be used uninitialized [-Wmaybe-uninitialized] 405 | : _Function_base(), _M_invoker(__x._M_invoker) | ~~~~^~~~~~~~~~ In file included from /usr/include/c++/14/regex:65: /usr/include/c++/14/bits/regex_automaton.h: In member function ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_repeat(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’: /usr/include/c++/14/bits/regex_automaton.h:257:17: note: ‘__tmp’ declared here 257 | _StateT __tmp(_S_opcode_repeat); | ^~~~~ In member function ‘bool std::_Function_base::_M_empty() const’, inlined from ‘std::function<_Res(_ArgTypes ...)>::operator bool() const [with _Res = bool; _ArgTypes = {char}]’ at /usr/include/c++/14/bits/std_function.h:574:25, inlined from ‘std::function<_Res(_ArgTypes ...)>::function(std::function<_Res(_ArgTypes ...)>&&) [with _Res = bool; _ArgTypes = {char}]’ at /usr/include/c++/14/bits/std_function.h:407:6, inlined from ‘std::__detail::_State<_Char_type>::_State(std::__detail::_State<_Char_type>&&) [with _Char_type = char]’ at /usr/include/c++/14/bits/regex_automaton.h:149:4, inlined from ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_repeat(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_automaton.h:263:24: /usr/include/c++/14/bits/std_function.h:247:37: warning: ‘*(const std::_Function_base*)((char*)&__tmp + offsetof(std::__detail::_StateT, std::__detail::_State::.std::__detail::_State_base::)).std::_Function_base::_M_manager’ may be used uninitialized [-Wmaybe-uninitialized] 247 | bool _M_empty() const { return !_M_manager; } | ^~~~~~~~~~ /usr/include/c++/14/bits/regex_automaton.h: In member function ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_repeat(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’: /usr/include/c++/14/bits/regex_automaton.h:257:17: note: ‘__tmp’ declared here 257 | _StateT __tmp(_S_opcode_repeat); | ^~~~~ In constructor ‘std::function<_Res(_ArgTypes ...)>::function(std::function<_Res(_ArgTypes ...)>&&) [with _Res = bool; _ArgTypes = {char}]’, inlined from ‘std::__detail::_State<_Char_type>::_State(std::__detail::_State<_Char_type>&&) [with _Char_type = char]’ at /usr/include/c++/14/bits/regex_automaton.h:149:4, inlined from ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_alt(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_automaton.h:251:24, inlined from ‘void std::__detail::_Compiler<_TraitsT>::_M_disjunction() [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_compiler.tcc:103:18: /usr/include/c++/14/bits/std_function.h:405:42: warning: ‘*(std::function*)((char*)&__tmp + offsetof(std::__detail::_StateT, std::__detail::_State::.std::__detail::_State_base::)).std::function::_M_invoker’ may be used uninitialized [-Wmaybe-uninitialized] 405 | : _Function_base(), _M_invoker(__x._M_invoker) | ~~~~^~~~~~~~~~ /usr/include/c++/14/bits/regex_automaton.h: In member function ‘void std::__detail::_Compiler<_TraitsT>::_M_disjunction() [with _TraitsT = std::__cxx11::regex_traits]’: /usr/include/c++/14/bits/regex_automaton.h:246:17: note: ‘__tmp’ declared here 246 | _StateT __tmp(_S_opcode_alternative); | ^~~~~ In member function ‘bool std::_Function_base::_M_empty() const’, inlined from ‘std::function<_Res(_ArgTypes ...)>::operator bool() const [with _Res = bool; _ArgTypes = {char}]’ at /usr/include/c++/14/bits/std_function.h:574:25, inlined from ‘std::function<_Res(_ArgTypes ...)>::function(std::function<_Res(_ArgTypes ...)>&&) [with _Res = bool; _ArgTypes = {char}]’ at /usr/include/c++/14/bits/std_function.h:407:6, inlined from ‘std::__detail::_State<_Char_type>::_State(std::__detail::_State<_Char_type>&&) [with _Char_type = char]’ at /usr/include/c++/14/bits/regex_automaton.h:149:4, inlined from ‘std::__detail::_StateIdT std::__detail::_NFA<_TraitsT>::_M_insert_alt(std::__detail::_StateIdT, std::__detail::_StateIdT, bool) [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_automaton.h:251:24, inlined from ‘void std::__detail::_Compiler<_TraitsT>::_M_disjunction() [with _TraitsT = std::__cxx11::regex_traits]’ at /usr/include/c++/14/bits/regex_compiler.tcc:103:18: /usr/include/c++/14/bits/std_function.h:247:37: warning: ‘*(const std::_Function_base*)((char*)&__tmp + offsetof(std::__detail::_StateT, std::__detail::_State::.std::__detail::_State_base::)).std::_Function_base::_M_manager’ may be used uninitialized [-Wmaybe-uninitialized] 247 | bool _M_empty() const { return !_M_manager; } | ^~~~~~~~~~ /usr/include/c++/14/bits/regex_automaton.h: In member function ‘void std::__detail::_Compiler<_TraitsT>::_M_disjunction() [with _TraitsT = std::__cxx11::regex_traits]’: /usr/include/c++/14/bits/regex_automaton.h:246:17: note: ‘__tmp’ declared here 246 | _StateT __tmp(_S_opcode_alternative); | ^~~~~ g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/exporters/ParentIDCalculator.cpp -o redatamlib/exporters/ParentIDCalculator.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/exporters/RListExporter.cpp -o redatamlib/exporters/RListExporter.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/entities/RedatamDatabase.cpp -o redatamlib/entities/RedatamDatabase.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/entities/Variable.cpp -o redatamlib/entities/Variable.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/readers/XMLParser.cpp -o redatamlib/readers/XMLParser.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c redatamlib/utils.cpp -o redatamlib/utils.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c main.cpp -o main.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG -Ivendor -Iredatamlib -Iredatamlib/entities -Iredatamlib/exporters -Iredatamlib/readers -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-xtra/lib -Wl,-O1 -o redatam.so vendor/pugixml.o redatamlib/readers/BitArrayReader.o redatamlib/readers/ByteArrayReader.o redatamlib/entities/Entity.o redatamlib/readers/FuzzyEntityParser.o redatamlib/readers/FuzzyVariableParser.o redatamlib/exporters/ParentIDCalculator.o redatamlib/exporters/RListExporter.o redatamlib/entities/RedatamDatabase.o redatamlib/entities/Variable.o redatamlib/readers/XMLParser.o redatamlib/utils.o main.o cpp11.o -Lvendor -Lredatamlib -L/home/hornik/tmp/R-d-gcc-xtra/lib -lR installing to /home/hornik/tmp/CRAN_special_gcc-san/redatam.Rcheck/00LOCK-redatam/00new/redatam/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (redatam)