* using log directory ‘/srv/hornik/tmp/CRAN/rebmix.Rcheck’ * using R Under development (unstable) (2024-07-08 r86886) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (1+b1) Debian flang-new version 18.1.8 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘rebmix/DESCRIPTION’ ... OK * this is package ‘rebmix’ version ‘2.16.0’ * checking CRAN incoming feasibility ... [4s/8s] NOTE Maintainer: ‘Marko Nagode ’ Found the following (possibly) invalid URLs: URL: https://engineering.case.edu/bearingdatacenter/welcome From: man/bearings.Rd Status: Error Message: server certificate verification failed. CAfile: none CRLfile: none (Status without verification: OK) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘rebmix’ can be installed ... [20s/20s] OK * used C compiler: ‘Debian clang version 18.1.8 (1+b1)’ * used C++ compiler: ‘Debian clang version 18.1.8 (1+b1)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s/13s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [1s/1s] ERROR Running examples in ‘rebmix-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: RCLRMIX-class > ### Title: Class '"RCLRMIX"' > ### Aliases: RCLRMIX-class RCLRMVNORM-class > ### Keywords: classes > > ### ** Examples > > devAskNewPage(ask = TRUE) > > # Generate normal dataset. > > n <- c(500, 200, 400) > > Theta <- new("RNGMVNORM.Theta", c = 3, d = 2) > > a.theta1(Theta, 1) <- c(3, 10) > a.theta1(Theta, 2) <- c(8, 6) > a.theta1(Theta, 3) <- c(12, 11) > a.theta2(Theta, 1) <- c(3, 0.3, 0.3, 2) > a.theta2(Theta, 2) <- c(5.7, -2.3, -2.3, 3.5) > a.theta2(Theta, 3) <- c(2, 1, 1, 2) > > normal <- RNGMIX(model = "RNGMVNORM", Dataset.name = "normal_1", n = n, Theta = a.Theta(Theta)) RNGMIX Version 2.16.0 Dataset = normal_1 Error in RNGMIX(model = model) : array over-run in .C("RRNGMVNORM") in character argument 12, element 1 ''->' ' Calls: RNGMIX -> RNGMIX -> .local -> RNGMIX -> RNGMIX Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [0s/0s] ERROR Error(s) in re-building vignettes: ... --- re-building ‘rebmix.Rnw’ using Sweave Attaching package: 'rebmix' The following objects are masked from 'package:stats': AIC, BIC The following object is masked from 'package:base': split RNGMIX Version 2.16.0 Dataset = gamma1 Error: processing vignette 'rebmix.Rnw' failed with diagnostics: chunk 3 (label = rebmix-code) Error in RNGMIX(model = model) : array over-run in .C("RRNGMIX") in character argument 13, element 1 ''->' ' --- failed re-building 'rebmix.Rnw' SUMMARY: processing the following file failed: 'rebmix.Rnw' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [2s/2s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs, 1 NOTE