* installing *source* package ‘rbiom’ ...
** this is package ‘rbiom’ version ‘2.2.0’
** using staged installation
** libs
using C compiler: ‘gcc (Debian 20250322-1) 15.0.1 20250322 (experimental) [master r15-8663-g7a6bbab6ae5]’
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c alpha_div.c -o alpha_div.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c beta_div.c -o beta_div.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c get.c -o get.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c pthreads.c -o pthreads.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rarefy.c -o rarefy.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c read_tree.c -o read_tree.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-snap/include" -DNDEBUG   -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c unifrac.c -o unifrac.o
/usr/lib/gcc-snapshot/bin/gcc -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-snap/lib -L/usr/lib/gcc-snapshot/lib -o rbiom.so alpha_div.o beta_div.o get.o init.o pthreads.o rarefy.o read_tree.o unifrac.o -L/home/hornik/tmp/R-d-gcc-snap/lib -lR
installing to /home/hornik/tmp/CRAN_special_gcc15/rbiom.Rcheck/00LOCK-rbiom/00new/rbiom/libs
** R
** data
*** moving datasets to lazyload DB
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rbiom)