* installing *source* package ‘rbiom’ ...
** this is package ‘rbiom’ version ‘2.0.6’
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-12) 14.2.0’
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c parallel_beta_div.cpp -o parallel_beta_div.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c parallel_unifrac.cpp -o parallel_unifrac.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c rcpp_alpha_div.cpp -o rcpp_alpha_div.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c rcpp_rarefy.cpp -o rcpp_rarefy.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-xtra/include" -DNDEBUG  -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_gcc-san/Library/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -Wno-ignored-attributes -Wno-deprecated-declarations -Wno-stringop-truncation  -DR_NO_REMAP -c rcpp_treeIO.cpp -o rcpp_treeIO.o
g++-14 -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-xtra/lib -Wl,-O1 -o rbiom.so RcppExports.o parallel_beta_div.o parallel_unifrac.o rcpp_alpha_div.o rcpp_rarefy.o rcpp_treeIO.o -latomic -lpthread -L/home/hornik/tmp/R-d-gcc-xtra/lib -lR
installing to /home/hornik/tmp/CRAN_special_gcc-san/rbiom.Rcheck/00LOCK-rbiom/00new/rbiom/libs
** R
** data
*** moving datasets to lazyload DB
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rbiom)