* installing *source* package ‘rbiom’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.6 (1)’
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c parallel_beta_div.cpp -o parallel_beta_div.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c parallel_unifrac.cpp -o parallel_unifrac.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rcpp_alpha_div.cpp -o rcpp_alpha_div.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rcpp_rarefy.cpp -o rcpp_rarefy.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rcpp_treeIO.cpp -o rcpp_treeIO.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o rbiom.so RcppExports.o parallel_beta_div.o parallel_unifrac.o rcpp_alpha_div.o rcpp_rarefy.o rcpp_treeIO.o -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/rbiom.Rcheck/00LOCK-rbiom/00new/rbiom/libs
** R
** data
*** moving datasets to lazyload DB
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘babies’
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘babies’
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘gems’
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘gems’
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘hmp50’
Warning: namespace ‘rbiom’ is not available and has been replaced
by .GlobalEnv when processing object ‘hmp50’
Error in rb_comment(self, private, value) : 
  could not find function "rb_comment"
ERROR: lazydata failed for package ‘rbiom’
* removing ‘/srv/hornik/tmp/CRAN_pretest/rbiom.Rcheck/rbiom’