* using log directory ‘/srv/hornik/tmp/CRAN/rYWAASB.Rcheck’ * using R Under development (unstable) (2024-08-15 r87022) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘rYWAASB/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘rYWAASB’ version ‘0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Ali Arminian ’ New submission Possibly misspelled words in DESCRIPTION: WAASB (10:59) metan (10:75) packae (10:81) Found the following (possibly) invalid URLs: URL: https://cran.r-project.org/package=Rpath From: README.md Status: 404 Message: Not Found URL: https://github.com/abeyran/rWAASB From: DESCRIPTION DESCRIPTION man/bar_plot1.Rd man/bar_plot2.Rd man/rYWAASB.Rd man/ranki.Rd Status: 404 Message: Not Found URL: https://github.com/abeyran/rYWAASB From: README.md Status: 404 Message: Not Found URL: https://github.com/abeyran/rYWAASB%20analysis/issues From: README.md Status: 404 Message: Not Found The Title field should be in title case. Current version is: ‘Simultaneous selection’ In title case that is: ‘Simultaneous Selection’ The BugReports field in DESCRIPTION has https://github.com/abeyran/rWAASB which should likely be https://github.com/abeyran/rWAASB/issues instead. The Date field is not in ISO 8601 yyyy-mm-dd format. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘rYWAASB’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE Author field differs from that derived from Authors@R Author: ‘Ali Arminian [aut, cre, cph] ()’ Authors@R: ‘Ali Arminian [aut, cre]’ * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] NOTE checkRd: (-1) bar_plot1.Rd:16-17: Lost braces; missing escapes or markup? 16 | { Creates the bar plot for a new index for simultaneous selection of genotypes for trait and WAASB index. | ^ checkRd: (-1) bar_plot2.Rd:16-17: Lost braces; missing escapes or markup? 16 | { Creates the bar plot for a new index for simultaneous selection of genotypes for trait and WAASB index. | ^ checkRd: (-1) ranki.Rd:16-18: Lost braces 16 | {Estimates a new index for simultaneous selection of genotypes for trait and WAASB index. This can be compared with WAASBY index of Olivoto (2019). | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [1s/1s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [6s/6s] OK * checking PDF version of manual ... [3s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 3 NOTEs