* using log directory 'd:/RCompile/CRANincoming/R-devel/rBiasCorrection.Rcheck'
* using R version 4.5.0 RC (2025-04-04 r88112 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'rBiasCorrection/DESCRIPTION' ... OK
* this is package 'rBiasCorrection' version '0.3.5'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [12s] OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'rBiasCorrection' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [13s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [258s] OK
  Running 'testthat.R' [258s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [25s] ERROR
Error(s) in re-building vignettes:
--- re-building 'rBiasCorrection_benchmarking.qmd' using html


processing file: rBiasCorrection_benchmarking.qmd
output file: rBiasCorrection_benchmarking.knit.md

pandoc 
  to: html
  output-file: rBiasCorrection_benchmarking.html
  standalone: true
  embed-resources: true
  wrap: none
  default-image-extension: png
  css:
    - >-
      D:/RCompile/CRANpkg/lib/4.5/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css
  
metadata
  document-css: false
  lang: en
  minimal: true
  theme: none
  title: 'rBiasCorrection: Benchmarking'
  date: '`r Sys.Date()`'
  vignette: |
    %\VignetteIndexEntry{rBiasCorrection_enchmarking} %\VignetteEncoding{UTF-8} %\VignetteEngine{quarto::html}
  editor_options:
    chunk_output_type: console
  
Output created: rBiasCorrection_benchmarking.html

--- finished re-building 'rBiasCorrection_benchmarking.qmd'

--- re-building 'rBiasCorrection_howto.qmd' using html


processing file: rBiasCorrection_howto.qmd
output file: rBiasCorrection_howto.knit.md

pandoc 
  to: html
  output-file: rBiasCorrection_howto.html
  standalone: true
  embed-resources: true
  wrap: none
  default-image-extension: png
  css:
    - >-
      D:/RCompile/CRANpkg/lib/4.5/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css
  html-math-method:
    method: mathjax
  
metadata
  document-css: false
  lang: en
  minimal: true
  theme: none
  title: rBiasCorrection
  date: '`r Sys.Date()`'
  vignette: |
    %\VignetteIndexEntry{rBiasCorrection_howto} %\VignetteEncoding{UTF-8} %\VignetteEngine{quarto::html}
  editor_options:
    chunk_output_type: console
  
[WARNING] Could not fetch resource ../../../../../../../temp/2025_04_05_14_10_17_11567/RtmpoNLjNf/png/CDH1_CpG1.png
pandoc: D:\temp\2025_04_05_14_10_17_11567\RtmpoNLjNf/png/CDH1_CpG1_corrected_c.png: withBinaryFile: does not exist (No such file or directory)
Error: processing vignette 'rBiasCorrection_howto.qmd' failed with diagnostics:
✖ Error running quarto cli.
Caused by error:
! System command 'quarto.exe' failed
--- failed re-building 'rBiasCorrection_howto.qmd'

SUMMARY: processing the following file failed:
  'rBiasCorrection_howto.qmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [21s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR