* using log directory 'd:/RCompile/CRANincoming/R-devel/quartify.Rcheck'
* using R Under development (unstable) (2026-01-06 r89281 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'quartify/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'quartify' version '1.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Damien Dotta <damien.dotta@live.fr>'

New submission

Possibly misspelled words in DESCRIPTION:
  qmd (8:73)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'quartify' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
  'CRAN_CHECKLIST_1.0.0.md'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [82s] ERROR
  Running 'testthat.R' [82s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(quartify)
  > 
  > test_check("quartify")
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983821305e2e.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983821305e2e.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983821305e2e.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983821305e2e.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198382bb51430.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198382bb51430.html'
  Saving _problems/test-addins-64.R
  Saving _problems/test-addins-65.R
  Saving _problems/test-addins-66.R
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385b62720f.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385b62720f.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file19838736c7476.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file19838736c7476.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385651200e.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385651200e.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381b96e3d.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381b96e3d.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983875ff44ce.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983875ff44ce.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983814cbef9.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983814cbef9.html'
  x Input file does not exist: 'nonexistent.R'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385adf5cf0.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385adf5cf0.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file19838100d6e9a.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file19838100d6e9a.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381bca12a9.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381bca12a9.html'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198387be1131c.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983844fa1393.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983844fa1393.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381f39634c.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198387a3d1622.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385d97255a.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198385616680b.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198384a996c2d.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198382be616a3.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198387752dbb.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file19838673614cf.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198383ff27640.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198381617215d.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file1983878e0478c.qmd'
  v Quarto markdown file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198382f01e0.qmd'
  Rendering Quarto document to HTML...
  v HTML file created: 'D:\temp\2026_01_07_20_05_16_30115\RtmpCgwgEX\file198382f01e0.html'
  Saving _problems/test-rtoqmd-620.R
  Saving _problems/test-rtoqmd-621.R
  Saving _problems/test-rtoqmd-622.R
  Saving _problems/test-rtoqmd-623.R
  Saving _problems/test-rtoqmd-624.R
  Saving _problems/test-rtoqmd-625.R
  Saving _problems/test-rtoqmd-626.R
  Saving _problems/test-rtoqmd-627.R
  Saving _problems/test-rtoqmd-628.R
  
  -- Converting R Scripts to Quarto Markdown -------------------------------------
  i Searching directory: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b'
  i Recursive: TRUE
  v Found 3 R scripts to convert
  
  -- Converting files... --
  
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b/script1.qmd'
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b/script2.qmd'
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b/subdir/script3.qmd'
  
  -- Conversion Summary --
  
  v Successfully converted: 3 files
  
  -- Creating Quarto Book --
  
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b/index.qmd'
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387a8d162b/_quarto.yml'
  
  -- Converting R Scripts to Quarto Markdown -------------------------------------
  i Searching directory: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198383ea813b7'
  i Recursive: FALSE
  v Found 1 R script to convert
  
  -- Converting files... --
  
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198383ea813b7/script1.qmd'
  
  -- Conversion Summary --
  
  v Successfully converted: 1 file
  
  -- Creating Quarto Book --
  
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198383ea813b7/index.qmd'
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198383ea813b7/_quarto.yml'
  
  -- Converting R Scripts to Quarto Markdown -------------------------------------
  i Searching directory: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file19838781039cf'
  i Recursive: TRUE
  i Excluding 1 file matching pattern: test_script\.R$
  v Found 1 R script to convert
  
  -- Converting files... --
  
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file19838781039cf/script.qmd'
  
  -- Conversion Summary --
  
  v Successfully converted: 1 file
  
  -- Creating Quarto Book --
  
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file19838781039cf/index.qmd'
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file19838781039cf/_quarto.yml'
  
  -- Converting R Scripts to Quarto Markdown -------------------------------------
  i Searching directory: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198387e3843af'
  i Recursive: TRUE
  ! No R script files found in directory
  x Directory does not exist: 'nonexistent_directory'
  
  -- Converting R Scripts to Quarto Markdown -------------------------------------
  i Searching directory: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198381694d42'
  i Recursive: TRUE
  v Found 1 R script to convert
  
  -- Converting files... --
  
  v Quarto markdown file created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198381694d42/analysis.qmd'
  
  -- Conversion Summary --
  
  v Successfully converted: 1 file
  
  -- Creating Quarto Book --
  
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198381694d42/index.qmd'
  v Created: 'D:/temp/2026_01_07_20_05_16_30115/RtmpCgwgEX/file198381694d42/_quarto.yml'
  [ FAIL 12 | WARN 0 | SKIP 0 | PASS 122 ]
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-addins.R:64:3'): rtoqmd handles RStudio code sections correctly ──
  Expected `any(grepl("^## Title 2$", output))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-addins.R:65:3'): rtoqmd handles RStudio code sections correctly ──
  Expected `any(grepl("^### Title 3$", output))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-addins.R:66:3'): rtoqmd handles RStudio code sections correctly ──
  Expected `any(grepl("^#### Title 4$", output))` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:620:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "## Section with hash")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:621:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "## Section with many hashes")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:622:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "### Section with equals")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:623:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "### Section with many equals")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:624:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "#### Section with dashes")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:625:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "#### Section with many dashes")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:626:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "## Mixed symbols with hash")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:627:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "### Mixed symbols with equals")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  ── Failure ('test-rtoqmd.R:628:3'): rtoqmd removes trailing symbols from section titles ──
  Expected `any(output == "#### Mixed symbols with dashes")` to be TRUE.
  Differences:
  `actual`:   FALSE
  `expected`: TRUE 
  
  
  [ FAIL 12 | WARN 0 | SKIP 0 | PASS 122 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [11s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 2 NOTEs