downloading reverse dependencies ‘babelmixr2’, ‘bdc’, ‘epizootic’, ‘espadon’, ‘fastbioclim’, ‘healthyAddress’, ‘jagstargets’, ‘LAGOSNE’, ‘multidplyr’, ‘nonmem2rx’, ‘pizzarr’, ‘poems’, ‘rxode2’, ‘SeuratExplorer’, ‘shinymrp’, ‘SimDesign’, ‘sourcoise’, ‘spada’, ‘SpaDES.core’, ‘starburst’, ‘tabs’, ‘bregr’, ‘fastreg’, ‘glow’, ‘henna’, ‘LISTO’, ‘mlr3oml’, ‘nlmixr2est’, ‘nlmixr2lib’, ‘PhenotypeR’, ‘pins’, ‘reproducible’, ‘rio’, ‘SerolyzeR’, ‘targets’, ‘vcr’, ‘xfun’, ‘zarr’ trying URL 'file:///data/Repositories/CRAN/src/contrib/babelmixr2_0.1.11.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bdc_1.1.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/epizootic_2.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/espadon_1.11.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/fastbioclim_0.4.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/healthyAddress_0.5.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jagstargets_1.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/LAGOSNE_2.0.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/multidplyr_0.1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nonmem2rx_0.1.9.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pizzarr_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/poems_1.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rxode2_5.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SeuratExplorer_0.1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinymrp_0.10.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SimDesign_2.25.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/sourcoise_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/spada_0.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SpaDES.core_3.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/starburst_0.3.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tabs_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bregr_1.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/fastreg_0.8.17.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/glow_0.13.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/henna_0.7.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/LISTO_0.6.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mlr3oml_0.12.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nlmixr2est_5.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nlmixr2lib_0.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PhenotypeR_0.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pins_1.4.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/reproducible_3.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rio_1.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SerolyzeR_1.4.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/targets_1.12.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vcr_2.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/xfun_0.57.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/zarr_0.3.0.tar.gz' installing dependencies ‘abdiv’, ‘autometric’, ‘blosc’, ‘clustermq’, ‘cmdstanr’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘contentid’, ‘CoordinateCleaner’, ‘crew’, ‘DrugUtilisation’, ‘EnhancedVolcano’, ‘forestploter’, ‘fossil’, ‘future.batchtools’, ‘ggalign’, ‘ggeasy’, ‘ggstatsplot’, ‘googleCloudStorageR’, ‘gpkg’, ‘hexView’, ‘hutils’, ‘hutilscpp’, ‘igraph’, ‘IncidencePrevalence’, ‘job’, ‘js’, ‘leaftime’, ‘liver’, ‘lixoftConnectors’, ‘mapedit’, ‘MAST’, ‘MeasurementDiagnostics’, ‘merDeriv’, ‘metRology’, ‘Microsoft365R’, ‘mlr3db’, ‘monolix2rx’, ‘nlmixr2extra’, ‘nlmixr2plot’, ‘NLMR’, ‘NMdata’, ‘nonmem2R’, ‘nonmem2rx’, ‘nonmemica’, ‘nplr’, ‘OmopConstructor’, ‘OmopSketch’, ‘osdc’, ‘paws.compute’, ‘paws.security.identity’, ‘pkgload’, ‘PKNCA’, ‘pmxTools’, ‘poems’, ‘PopED’, ‘primes’, ‘pzfx’, ‘qs’, ‘qs2’, ‘quickPlot’, ‘reproducible’, ‘Require’, ‘rgnparser’, ‘rmatio’, ‘RPushbullet’, ‘scRNAseq’, ‘scuttle’, ‘Signac’, ‘SpaDES.tools’, ‘statisfactory’, ‘stringfish’, ‘tarchetypes’, ‘taxadb’, ‘UCSCXenaShiny’, ‘visreg’, ‘zlib’ Warning: packages ‘lixoftConnectors’, ‘qs’, ‘cmdstanr’, ‘NLMR’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘alabaster.ranges’, ‘forestmodel’, ‘BiocVersion’, ‘BiocBaseUtils’, ‘alabaster.schemas’, ‘alabaster.se’, ‘encode’, ‘csv’, ‘spec’, ‘metaplot’, ‘leafpm’, ‘ggside’, ‘statsExpressions’, ‘ezcox’, ‘UCSCXenaTools’, ‘codeCollection’, ‘duckplyr’, ‘fabricatr’, ‘omnibus’, ‘ExperimentHub’, ‘AnnotationHub’, ‘alabaster.base’, ‘alabaster.matrix’, ‘alabaster.sce’, ‘gypsum’ begin installing package ‘forestmodel’ begin installing package ‘BiocVersion’ begin installing package ‘BiocBaseUtils’ begin installing package ‘alabaster.schemas’ begin installing package ‘encode’ begin installing package ‘csv’ begin installing package ‘leafpm’ begin installing package ‘ggside’ begin installing package ‘statsExpressions’ begin installing package ‘UCSCXenaTools’ begin installing package ‘duckplyr’ begin installing package ‘codeCollection’ begin installing package ‘fabricatr’ begin installing package ‘omnibus’ begin installing package ‘gypsum’ begin installing package ‘stringfish’ begin installing package ‘PKNCA’ begin installing package ‘PopED’ begin installing package ‘CoordinateCleaner’ begin installing package ‘rgnparser’ begin installing package ‘contentid’ begin installing package ‘js’ begin installing package ‘hutils’ begin installing package ‘igraph’ begin installing package ‘NMdata’ begin installing package ‘nonmem2R’ begin installing package ‘blosc’ begin installing package ‘fossil’ * installing *source* package ‘alabaster.schemas’ ... ** this is package ‘alabaster.schemas’ version ‘1.11.0’ ** using staged installation ** inst ** help No man pages found in package ‘alabaster.schemas’ *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.schemas) begin installing package ‘metRology’ * installing *source* package ‘BiocVersion’ ... ** this is package ‘BiocVersion’ version ‘3.23.1’ ** using staged installation ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocVersion) begin installing package ‘MAST’ * installing *source* package ‘leafpm’ ... ** this is package ‘leafpm’ version ‘0.1.0’ ** package ‘leafpm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (leafpm) begin installing package ‘Signac’ * installing *source* package ‘encode’ ... ** this is package ‘encode’ version ‘0.3.7’ ** package ‘encode’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (encode) begin installing package ‘job’ * installing *source* package ‘BiocBaseUtils’ ... ** this is package ‘BiocBaseUtils’ version ‘1.13.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocBaseUtils) begin installing package ‘future.batchtools’ * installing *source* package ‘csv’ ... ** this is package ‘csv’ version ‘0.6.2’ ** package ‘csv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (csv) begin installing package ‘RPushbullet’ * installing *source* package ‘codeCollection’ ... ** this is package ‘codeCollection’ version ‘0.1.3’ ** package ‘codeCollection’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codeCollection) begin installing package ‘quickPlot’ * installing *source* package ‘js’ ... ** this is package ‘js’ version ‘1.2.1’ ** package ‘js’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (js) begin installing package ‘reproducible’ * installing *source* package ‘contentid’ ... ** this is package ‘contentid’ version ‘0.0.19’ ** package ‘contentid’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (contentid) begin installing package ‘Require’ * installing *source* package ‘rgnparser’ ... ** this is package ‘rgnparser’ version ‘0.3.0’ ** package ‘rgnparser’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rgnparser) begin installing package ‘paws.compute’ * installing *source* package ‘fabricatr’ ... ** this is package ‘fabricatr’ version ‘1.0.2’ ** package ‘fabricatr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fabricatr) begin installing package ‘paws.security.identity’ * installing *source* package ‘RPushbullet’ ... ** this is package ‘RPushbullet’ version ‘0.3.5’ ** package ‘RPushbullet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RPushbullet) begin installing package ‘leaftime’ * installing *source* package ‘job’ ... ** this is package ‘job’ version ‘0.3.1’ ** package ‘job’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (job) begin installing package ‘gpkg’ * installing *source* package ‘gypsum’ ... ** this is package ‘gypsum’ version ‘1.7.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gypsum) begin installing package ‘forestploter’ * installing *source* package ‘hutils’ ... ** this is package ‘hutils’ version ‘2.0.0’ ** package ‘hutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hutils) begin installing package ‘ggalign’ * installing *source* package ‘omnibus’ ... ** this is package ‘omnibus’ version ‘1.2.15’ ** package ‘omnibus’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (omnibus) begin installing package ‘merDeriv’ * installing *source* package ‘fossil’ ... ** this is package ‘fossil’ version ‘0.4.0’ ** package ‘fossil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fossil) begin installing package ‘visreg’ * installing *source* package ‘leaftime’ ... ** this is package ‘leaftime’ version ‘0.2.0’ ** package ‘leaftime’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (leaftime) begin installing package ‘crew’ * installing *source* package ‘UCSCXenaTools’ ... ** this is package ‘UCSCXenaTools’ version ‘1.7.0’ ** package ‘UCSCXenaTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (UCSCXenaTools) begin installing package ‘abdiv’ * installing *source* package ‘statsExpressions’ ... ** this is package ‘statsExpressions’ version ‘1.7.4’ ** package ‘statsExpressions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statsExpressions) begin installing package ‘ggeasy’ * installing *source* package ‘forestmodel’ ... ** this is package ‘forestmodel’ version ‘0.6.2’ ** package ‘forestmodel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestmodel) begin installing package ‘liver’ * installing *source* package ‘gpkg’ ... ** this is package ‘gpkg’ version ‘0.0.14’ ** package ‘gpkg’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gpkg) begin installing package ‘EnhancedVolcano’ * installing *source* package ‘future.batchtools’ ... ** this is package ‘future.batchtools’ version ‘0.21.0’ ** package ‘future.batchtools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (future.batchtools) begin installing package ‘primes’ * installing *source* package ‘abdiv’ ... ** this is package ‘abdiv’ version ‘0.2.0’ ** package ‘abdiv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abdiv) begin installing package ‘scuttle’ * installing *source* package ‘forestploter’ ... ** this is package ‘forestploter’ version ‘1.1.3’ ** package ‘forestploter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forestploter) begin installing package ‘mlr3db’ * installing *source* package ‘visreg’ ... ** this is package ‘visreg’ version ‘2.8.0’ ** package ‘visreg’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (visreg) begin installing package ‘CohortCharacteristics’ * installing *source* package ‘nonmem2R’ ... ** this is package ‘nonmem2R’ version ‘0.2.5’ ** package ‘nonmem2R’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmem2R) begin installing package ‘CohortConstructor’ * installing *source* package ‘metRology’ ... ** this is package ‘metRology’ version ‘0.9-29-2’ ** package ‘metRology’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metRology) begin installing package ‘DrugUtilisation’ * installing *source* package ‘liver’ ... ** this is package ‘liver’ version ‘1.28’ ** package ‘liver’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (liver) begin installing package ‘IncidencePrevalence’ * installing *source* package ‘NMdata’ ... ** this is package ‘NMdata’ version ‘0.2.4’ ** package ‘NMdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NMdata) begin installing package ‘CohortSurvival’ * installing *source* package ‘ggeasy’ ... ** this is package ‘ggeasy’ version ‘0.1.6’ ** package ‘ggeasy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggeasy) begin installing package ‘OmopConstructor’ * installing *source* package ‘duckplyr’ ... ** this is package ‘duckplyr’ version ‘1.2.1’ ** package ‘duckplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (duckplyr) begin installing package ‘googleCloudStorageR’ * installing *source* package ‘merDeriv’ ... ** this is package ‘merDeriv’ version ‘0.2-5’ ** package ‘merDeriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (merDeriv) begin installing package ‘Microsoft365R’ * installing *source* package ‘ggside’ ... ** this is package ‘ggside’ version ‘0.4.1’ ** package ‘ggside’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggside) begin installing package ‘hexView’ * installing *source* package ‘EnhancedVolcano’ ... ** this is package ‘EnhancedVolcano’ version ‘1.29.1’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EnhancedVolcano) begin installing package ‘pzfx’ * installing *source* package ‘Require’ ... ** this is package ‘Require’ version ‘1.0.1’ ** package ‘Require’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in file(con, "r") : cannot open file '/home/hornik/tmp/CRAN_recheck/Library/Require/DESCRIPTION': No such file or directory Error in file(con, "r") : cannot open the connection ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Require) begin installing package ‘rmatio’ * installing *source* package ‘OmopConstructor’ ... ** this is package ‘OmopConstructor’ version ‘0.3.0’ ** package ‘OmopConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopConstructor) begin installing package ‘nplr’ * installing *source* package ‘mlr3db’ ... ** this is package ‘mlr3db’ version ‘0.7.1’ ** package ‘mlr3db’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlr3db) begin installing package ‘autometric’ * installing *source* package ‘PKNCA’ ... ** this is package ‘PKNCA’ version ‘0.12.1’ ** package ‘PKNCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PKNCA) begin installing package ‘clustermq’ * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.1.2’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) begin installing package ‘zlib’ * installing *source* package ‘hexView’ ... ** this is package ‘hexView’ version ‘0.3-4’ ** package ‘hexView’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hexView) begin installing package ‘pkgload’ * installing *source* package ‘pzfx’ ... ** this is package ‘pzfx’ version ‘0.3.1’ ** package ‘pzfx’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pzfx) begin installing package ‘spec’ * installing *source* package ‘crew’ ... ** this is package ‘crew’ version ‘1.3.0’ ** package ‘crew’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crew) begin installing package ‘metaplot’ * installing *source* package ‘googleCloudStorageR’ ... ** this is package ‘googleCloudStorageR’ version ‘0.7.0’ ** package ‘googleCloudStorageR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (googleCloudStorageR) begin installing package ‘ezcox’ * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.1’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) begin installing package ‘AnnotationHub’ * installing *source* package ‘autometric’ ... ** this is package ‘autometric’ version ‘0.1.2’ ** package ‘autometric’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHXhLqx/R.INSTALL29face4d831e82/autometric/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c autometric.c -o autometric.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c export.c -o export.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics.c -o metrics.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_linux.c -o metrics_linux.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_mac.c -o metrics_mac.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c metrics_windows.c -o metrics_windows.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thread.c -o thread.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c timers.c -o timers.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o autometric.so autometric.o export.o metrics.o metrics_linux.o metrics_mac.o metrics_windows.o thread.o timers.o -lpthread -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHXhLqx/R.INSTALL29face4d831e82/autometric/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-autometric/00new/autometric/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (autometric) begin installing package ‘alabaster.base’ * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘1.1.0’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) begin installing package ‘taxadb’ * installing *source* package ‘CohortSurvival’ ... ** this is package ‘CohortSurvival’ version ‘1.1.0’ ** package ‘CohortSurvival’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortSurvival) begin installing package ‘hutilscpp’ * installing *source* package ‘nplr’ ... ** this is package ‘nplr’ version ‘0.1-8’ ** package ‘nplr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nplr) begin installing package ‘pmxTools’ * installing *source* package ‘spec’ ... ** this is package ‘spec’ version ‘0.1.9’ ** package ‘spec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spec) begin installing package ‘mapedit’ * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.6.3’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) begin installing package ‘ggstatsplot’ * installing *source* package ‘reproducible’ ... ** this is package ‘reproducible’ version ‘3.0.0’ ** package ‘reproducible’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reproducible) begin installing package ‘osdc’ * installing *source* package ‘pkgload’ ... ** this is package ‘pkgload’ version ‘1.5.2’ ** package ‘pkgload’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgload) begin installing package ‘statisfactory’ * installing *source* package ‘mapedit’ ... ** this is package ‘mapedit’ version ‘0.8.0’ ** package ‘mapedit’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mapedit) begin installing package ‘MeasurementDiagnostics’ * installing *source* package ‘PopED’ ... ** this is package ‘PopED’ version ‘0.7.0’ ** package ‘PopED’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PopED) begin installing package ‘OmopSketch’ * installing *source* package ‘blosc’ ... ** this is package ‘blosc’ version ‘0.1.2’ ** package ‘blosc’ successfully unpacked and MD5 sums checked ** using staged installation checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for gcc... gcc-15 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-15 accepts -g... yes checking for gcc-15 option to enable C11 features... none needed checking how to run the C preprocessor... gcc-15 -E checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes Found pkg-config cflags and libs! -------------------------------------------------- Configuration for blosc cppflags: libs: -lblosc -------------------------------------------------- checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++20 accepts -g... yes checking for g++-15 -std=gnu++20 option to enable C++11 features... -std=gnu++11 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for blosc.h... yes checking whether available blosc version is good enough... yes checking whether blosc programs can be compiled... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyC6j0y/R.INSTALL29e9a1702a7338/blosc/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c blosc-feats.cpp -o blosc-feats.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c compress.cpp -o compress.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dtype.cpp -o dtype.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o blosc.so blosc-feats.o compress.o cpp11.o dtype.o -lblosc -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyC6j0y/R.INSTALL29e9a1702a7338/blosc/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-blosc/00new/blosc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blosc) begin installing package ‘SpaDES.tools’ * installing *source* package ‘taxadb’ ... ** this is package ‘taxadb’ version ‘0.2.1’ ** package ‘taxadb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxadb) * installing *source* package ‘statisfactory’ ... ** this is package ‘statisfactory’ version ‘1.0.4’ ** package ‘statisfactory’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statisfactory) * installing *source* package ‘MeasurementDiagnostics’ ... ** this is package ‘MeasurementDiagnostics’ version ‘0.3.0’ ** package ‘MeasurementDiagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MeasurementDiagnostics) * installing *source* package ‘metaplot’ ... ** this is package ‘metaplot’ version ‘0.8.4’ ** package ‘metaplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metaplot) begin installing package ‘nonmemica’ * installing *source* package ‘ezcox’ ... ** this is package ‘ezcox’ version ‘1.0.4’ ** package ‘ezcox’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ezcox) begin installing package ‘UCSCXenaShiny’ * installing *source* package ‘stringfish’ ... ** this is package ‘stringfish’ version ‘0.19.0’ ** package ‘stringfish’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config stringfish configure script checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++20 accepts -g... yes checking for g++-15 -std=gnu++20 option to enable C++11 features... -std=gnu++11 C++ compiler: g++-15 -std=gnu++20 R 4.7.0 detected -- using R default C++ standard PCRE2 10.46 library detected -- skipping PCRE2 compilation -lpcre2-8 configure: creating ./config.status config.status: creating src/Makevars ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpmi7nxI/R.INSTALL29e9746a156b58/stringfish/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DPCRE2_CODE_UNIT_WIDTH=8 -DHAVE_CONFIG_H -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DPCRE2_CODE_UNIT_WIDTH=8 -DHAVE_CONFIG_H -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sf_functions.cpp -o sf_functions.o In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/internal/_concurrent_unordered_impl.h:37, from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/concurrent_unordered_set.h:23, from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/RcppParallel/TBB.h:11, from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/RcppParallel.h:24, from sf_functions.cpp:4: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/internal/../atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/internal/../atomic.h:551:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 551 | return (atomic&)t; | ^~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DPCRE2_CODE_UNIT_WIDTH=8 -DHAVE_CONFIG_H -I. -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PCRE2_wrapper/pcre2_wrapper.cpp -o PCRE2_wrapper/pcre2_wrapper.o ar rcs libSFPCRE2.a PCRE2_wrapper/pcre2_wrapper.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o stringfish.so RcppExports.o sf_functions.o -lpthread -L. -lSFPCRE2 -lpcre2-8 -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpmi7nxI/R.INSTALL29e9746a156b58/stringfish/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-stringfish/00new/stringfish/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringfish) begin installing package ‘qs2’ * installing *source* package ‘CoordinateCleaner’ ... ** this is package ‘CoordinateCleaner’ version ‘3.0.1’ ** package ‘CoordinateCleaner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CoordinateCleaner) * installing *source* package ‘osdc’ ... ** this is package ‘osdc’ version ‘0.9.19’ ** package ‘osdc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (osdc) * installing *source* package ‘Microsoft365R’ ... ** this is package ‘Microsoft365R’ version ‘2.4.1’ ** package ‘Microsoft365R’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Microsoft365R) * installing *source* package ‘OmopSketch’ ... ** this is package ‘OmopSketch’ version ‘1.0.1’ ** package ‘OmopSketch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopSketch) * installing *source* package ‘ggstatsplot’ ... ** this is package ‘ggstatsplot’ version ‘0.13.6’ ** package ‘ggstatsplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggstatsplot) * installing *source* package ‘ggalign’ ... ** this is package ‘ggalign’ version ‘1.2.0’ ** package ‘ggalign’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggalign) * installing *source* package ‘pmxTools’ ... ** this is package ‘pmxTools’ version ‘1.5’ ** package ‘pmxTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pmxTools) * installing *source* package ‘quickPlot’ ... ** this is package ‘quickPlot’ version ‘1.0.4’ ** package ‘quickPlot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘extent’ with signature ‘"sf"’: no definition for class “sf” in method for ‘extent’ with signature ‘"Spatial"’: no definition for class “Spatial” in method for ‘extent’ with signature ‘"Raster"’: no definition for class “Raster” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quickPlot) * installing *source* package ‘nonmemica’ ... ** this is package ‘nonmemica’ version ‘1.0.11’ ** package ‘nonmemica’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmemica) * installing *source* package ‘hutilscpp’ ... ** this is package ‘hutilscpp’ version ‘0.10.10’ ** package ‘hutilscpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpa7QWuF/R.INSTALL2a00cd4ec9c25f/hutilscpp/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c AnyCharMatch.c -o AnyCharMatch.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CImplies.c -o CImplies.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CSquish.c -o CSquish.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_FLIP.c -o C_FLIP.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_Mode.c -o C_Mode.o C_Mode.c: In function ‘C_antiMode’: C_Mode.c:138:12: warning: unused variable ‘N_d’ [-Wunused-variable] 138 | R_xlen_t N_d = xlength(Domain); | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_abs_diff.c -o C_abs_diff.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_character2integer.c -o C_character2integer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_empty.c -o C_empty.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_lehmer.c -o C_lehmer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c C_op2M.c -o C_op2M.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cand3s.c -o Cand3s.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Ccoalesce0.c -o Ccoalesce0.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Ccount_logical.c -o Ccount_logical.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Ccumsum_reset.c -o Ccumsum_reset.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cdivisible.c -o Cdivisible.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cevery_int32.c -o Cevery_int32.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cis_constant.c -o Cis_constant.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cis_sorted.c -o Cis_sorted.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Clgl2raw.c -o Clgl2raw.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cor3s.c -o Cor3s.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cpar_in.c -o Cpar_in.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cpminmax.c -o Cpminmax.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Crange.c -o Crange.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Craw2lgl.c -o Craw2lgl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Csum_isna.c -o Csum_isna.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Csum_raw.c -o Csum_raw.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CtexParse.c -o CtexParse.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_16.c -o Cwhich_16.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_even.c -o Cwhich_even.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_first.c -o Cwhich_first.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_isna.c -o Cwhich_isna.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_last.c -o Cwhich_last.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Cwhich_true_onwards.c -o Cwhich_true_onwards.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ScalarLength.c -o ScalarLength.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c allocate.c -o allocate.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c altrep.c -o altrep.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c anyOutside.c -o anyOutside.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c asInteger2.c -o asInteger2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c between.c -o between.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c character.c -o character.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dbl2int.c -o dbl2int.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c error-warnings.c -o error-warnings.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c extent.c -o extent.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fastmatch_fastmatch.c -o fastmatch_fastmatch.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fmatchp_lgl.c -o fmatchp_lgl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c haversineDistance.c -o haversineDistance.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c is_seq.c -o is_seq.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c is_true.c -o is_true.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c isntRaw.c -o isntRaw.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logical3.c -o logical3.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c minmax.c -o minmax.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c omp_diagnose.c -o omp_diagnose.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c op_xlen2.c -o op_xlen2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pcg_hash.c -o pcg_hash.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c single_ox_x1_x2.c -o single_ox_x1_x2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c summary3.c -o summary3.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o hutilscpp.so AnyCharMatch.o CImplies.o CSquish.o C_FLIP.o C_Mode.o C_abs_diff.o C_character2integer.o C_empty.o C_lehmer.o C_op2M.o Cand3s.o Ccoalesce0.o Ccount_logical.o Ccumsum_reset.o Cdivisible.o Cevery_int32.o Cis_constant.o Cis_sorted.o Clgl2raw.o Cor3s.o Cpar_in.o Cpminmax.o Crange.o Craw2lgl.o Csum_isna.o Csum_raw.o CtexParse.o Cwhich_16.o Cwhich_even.o Cwhich_first.o Cwhich_isna.o Cwhich_last.o Cwhich_true_onwards.o ScalarLength.o allocate.o altrep.o anyOutside.o asInteger2.o between.o character.o dbl2int.o error-warnings.o extent.o fastmatch_fastmatch.o fmatchp_lgl.o haversineDistance.o init.o is_seq.o is_true.o isntRaw.o logical3.o minmax.o omp_diagnose.o op_xlen2.o pcg_hash.o single_ox_x1_x2.o summary3.o -fopenmp -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpa7QWuF/R.INSTALL2a00cd4ec9c25f/hutilscpp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-hutilscpp/00new/hutilscpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hutilscpp) * installing *source* package ‘UCSCXenaShiny’ ... ** this is package ‘UCSCXenaShiny’ version ‘2.2.0’ ** package ‘UCSCXenaShiny’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (UCSCXenaShiny) * installing *source* package ‘zlib’ ... ** this is package ‘zlib’ version ‘1.0.3’ ** package ‘zlib’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiE1hQe/R.INSTALL29ff037de9fd1a/zlib/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/home/hornik/tmp/R-d-gcc-15/include -I../inst/include -I./ `/home/hornik/tmp/R-d-gcc-15/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o 'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/home/hornik/tmp/R-d-gcc-15/include -I../inst/include -I./ `/home/hornik/tmp/R-d-gcc-15/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic -g -O2 -Wall -pedantic -mtune=native -c compressor.cpp -o compressor.o 'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/home/hornik/tmp/R-d-gcc-15/include -I../inst/include -I./ `/home/hornik/tmp/R-d-gcc-15/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic -g -O2 -Wall -pedantic -mtune=native -c constants.cpp -o constants.o 'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/home/hornik/tmp/R-d-gcc-15/include -I../inst/include -I./ `/home/hornik/tmp/R-d-gcc-15/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic -g -O2 -Wall -pedantic -mtune=native -c decompressor.cpp -o decompressor.o 'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/home/hornik/tmp/R-d-gcc-15/include -I../inst/include -I./ `/home/hornik/tmp/R-d-gcc-15/bin/Rscript -e "Rcpp:::CxxFlags()"` -fpic -g -O2 -Wall -pedantic -mtune=native -c validate.cpp -o validate.o 'CxxFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o zlib.so RcppExports.o compressor.o constants.o decompressor.o validate.o -lz -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiE1hQe/R.INSTALL29ff037de9fd1a/zlib/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-zlib/00new/zlib/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zlib) * installing *source* package ‘AnnotationHub’ ... ** this is package ‘AnnotationHub’ version ‘4.1.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AnnotationHub) begin installing package ‘ExperimentHub’ * installing *source* package ‘primes’ ... ** this is package ‘primes’ version ‘1.6.1’ ** package ‘primes’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpU41SqD/R.INSTALL29f704664a886e/primes/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gcd.cpp -o gcd.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c generate_n_primes.cpp -o generate_n_primes.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c is_prime.cpp -o is_prime.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c k_tuple.cpp -o k_tuple.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c next_prime.cpp -o next_prime.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nth_prime.cpp -o nth_prime.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c prime_count.cpp -o prime_count.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c prime_factors.cpp -o prime_factors.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sieve.cpp -o sieve.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o primes.so RcppExports.o gcd.o generate_n_primes.o is_prime.o k_tuple.o next_prime.o nth_prime.o prime_count.o prime_factors.o sieve.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpU41SqD/R.INSTALL29f704664a886e/primes/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-primes/00new/primes/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (primes) * installing *source* package ‘MAST’ ... ** this is package ‘MAST’ version ‘1.37.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MAST) * installing *source* package ‘SpaDES.tools’ ... ** this is package ‘SpaDES.tools’ version ‘2.1.1’ ** package ‘SpaDES.tools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFBqGFt/R.INSTALL2a05aa3dec3815/SpaDES.tools/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c duplicated.cpp -o duplicated.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c runif.cpp -o runif.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o SpaDES.tools.so RcppExports.o duplicated.o runif.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFBqGFt/R.INSTALL2a05aa3dec3815/SpaDES.tools/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-SpaDES.tools/00new/SpaDES.tools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SpaDES.tools) * installing *source* package ‘ExperimentHub’ ... ** this is package ‘ExperimentHub’ version ‘3.1.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ExperimentHub) * installing *source* package ‘rmatio’ ... ** this is package ‘rmatio’ version ‘0.19.0’ ** package ‘rmatio’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking inttypes.h... yes checking stdlib.h... yes checking stdint.h... yes checking strings.h... yes checking string.h... yes checking sys/stat.h... yes checking sys/types.h... yes checking unistd.h... checking for zlib... yes checking size of char... 1 checking size of short... 2 checking size of double... 8 checking size of float... 4 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of size_t... 8 checking size of void *... 8 checking for mat_int8_t... int8_t checking for mat_int16_t... int16_t checking for mat_int32_t... int32_t checking for mat_int64_t... int64_t checking for mat_uint8_t... uint8_t checking for mat_uint16_t... uint16_t checking for mat_uint32_t... uint32_t checking for mat_uint64_t... uint64_t configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/matio/config.h config.status: src/matio/config.h is unchanged ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjsVheP/R.INSTALL29fa53f8fd75e/rmatio/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/endian.c -o matio/endian.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/inflate.c -o matio/inflate.o matio/inflate.c: In function ‘InflateSkip’: matio/inflate.c:77:22: warning: storing the address of local variable ‘uncomp_buf’ in ‘*z.next_out’ [-Wdangling-pointer=] 77 | z->next_out = uncomp_buf; | ~~~~~~~~~~~~~^~~~~~~~~~~~ matio/inflate.c:51:31: note: ‘uncomp_buf’ declared here 51 | mat_uint8_t comp_buf[512],uncomp_buf[512]; | ^~~~~~~~~~ matio/inflate.c:49:35: note: ‘z’ declared here 49 | InflateSkip(mat_t *mat, z_streamp z, int nbytes) | ~~~~~~~~~~^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat4.c -o matio/mat4.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat5.c -o matio/mat5.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/mat.c -o matio/mat.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_cell.c -o matio/matvar_cell.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/matvar_struct.c -o matio/matvar_struct.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matio/read_data.c -o matio/read_data.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rmatio.c -o rmatio.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o rmatio.so matio/endian.o matio/inflate.o matio/mat4.o matio/mat5.o matio/mat.o matio/matvar_cell.o matio/matvar_struct.o matio/read_data.o rmatio.o -lz -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjsVheP/R.INSTALL29fa53f8fd75e/rmatio/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rmatio/00new/rmatio/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmatio) * installing *source* package ‘Signac’ ... ** this is package ‘Signac’ version ‘1.17.1’ ** package ‘Signac’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGRjrLT/R.INSTALL29f0ad449731bd/Signac/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c filter.cpp -o filter.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c group.cpp -o group.o group.cpp: In function ‘SEXPREC* groupCommand(std::string, Rcpp::Nullable >, std::size_t, bool)’: group.cpp:40:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 40 | for (size_t i=0; i linking system library * libzmq without DRAFT API found -> disabling crash monitor feature ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYutUUq/R.INSTALL29fc0528831a17/clustermq/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -isystem /usr/include/mit-krb5 -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQMaster.cpp -o CMQMaster.o In file included from CMQMaster.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -isystem /usr/include/mit-krb5 -isystem /usr/include/mit-krb5 -I/usr/include/pgm-5.3 -I/usr/include/libxml2 -I/usr/include/x86_64-linux-gnu -fPIC -Icppzmq -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CMQProxy.cpp -o CMQProxy.o In file included from CMQProxy.h:3, from CMQProxy.cpp:2: CMQMaster.h: In member function ‘bool CMQMaster::close(int)’: CMQMaster.h:65:26: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 65 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:62:21: warning: unused variable ‘rc’ [-Wunused-variable] 62 | int rc = zmq::poll(pitems, time_left); | ^~ CMQMaster.h: In member function ‘SEXPREC* CMQMaster::recv(int)’: CMQMaster.h:107:18: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 107 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h:109:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 109 | } while(data_offset >= msgs.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~ CMQMaster.h: In member function ‘void CMQMaster::proxy_submit_cmd(SEXP, int)’: CMQMaster.h:152:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 152 | auto n = recv_multipart(sock, std::back_inserter(msgs)); | ^ CMQMaster.h: In member function ‘int CMQMaster::register_peer(std::vector&)’: CMQMaster.h:341:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 341 | if (msgs.size() > ++cur_i) { | ~~~~~~~~~~~~^~~~~~~~~ CMQMaster.h:356:26: warning: comparison of integer expressions of different signedness: ‘std::unordered_map, CMQMaster::worker_t>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 356 | if (peers.size() > prev_size && w.status == wlife_t::active) { | ~~~~~~~~~~~~~^~~~~~~~~~~ CMQMaster.h:361:25: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 361 | if (msgs.size() > cur_i+2) { | ~~~~~~~~~~~~^~~~~~~~~ CMQProxy.h: In member function ‘SEXPREC* CMQProxy::proxy_receive_cmd()’: CMQProxy.h:54:14: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 54 | auto n = recv_multipart(to_master, std::back_inserter(msgs)); | ^ CMQProxy.h:55:14: warning: unused variable ‘status’ [-Wunused-variable] 55 | auto status = msg2wlife_t(msgs[1]); | ^~~~~~ CMQProxy.h: In member function ‘bool CMQProxy::process_one()’: CMQProxy.h:116:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 139 | for (int i=0; i& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppParallel/include/tbb/internal/../atomic.h:551:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 551 | return (atomic&)t; | ^~~~~~~~~~~~~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o qs2.so RcppExports.o qx_functions.o -L. -lzstd -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSVpzPp/R.INSTALL2a074358a1844f/qs2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-qs2/00new/qs2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qs2) begin installing package ‘nlmixr2extra’ begin installing package ‘monolix2rx’ begin installing package ‘nonmem2rx’ * installing *source* package ‘scuttle’ ... ** this is package ‘scuttle’ version ‘1.21.6’ ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsdrnJC/R.INSTALL29f79164018a23/scuttle/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c aggregate_across_cells.cpp -o aggregate_across_cells.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cumulative_prop.cpp -o cumulative_prop.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c downsample_counts.cpp -o downsample_counts.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fit_linear_model.cpp -o fit_linear_model.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pool_size_factors.cpp -o pool_size_factors.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c set_executor.cpp -o set_executor.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sum_counts.cpp -o sum_counts.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/beachmat/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o scuttle.so RcppExports.o aggregate_across_cells.o cumulative_prop.o downsample_counts.o fit_linear_model.o pool_size_factors.o set_executor.o sum_counts.o utils.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsdrnJC/R.INSTALL29f79164018a23/scuttle/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-scuttle/00new/scuttle/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scuttle) * installing *source* package ‘monolix2rx’ ... ** this is package ‘monolix2rx’ version ‘0.0.6’ ** package ‘monolix2rx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpE8WBeb/R.INSTALL2a1075469f7cca/monolix2rx/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataSettings.c -o dataSettings.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation.c -o equation.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longDef.c -o longDef.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c longOutput.c -o longOutput.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranContent.c -o mlxtranContent.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFileinfo.c -o mlxtranFileinfo.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranFit.c -o mlxtranFit.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranInd.c -o mlxtranInd.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranIndDefinition.c -o mlxtranIndDefinition.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranOp.c -o mlxtranOp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranParameter.c -o mlxtranParameter.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mlxtranTask.c -o mlxtranTask.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbuf.c -o sbuf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c shared.c -o shared.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c summaryData.c -o summaryData.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o monolix2rx.so dataSettings.o equation.o init.o longDef.o longOutput.o mem.o mlxtranContent.o mlxtranFileinfo.o mlxtranFit.o mlxtranInd.o mlxtranIndDefinition.o mlxtranOp.o mlxtranParameter.o mlxtranTask.o sbuf.o shared.o summaryData.o util.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpE8WBeb/R.INSTALL2a1075469f7cca/monolix2rx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-monolix2rx/00new/monolix2rx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monolix2rx) * installing *source* package ‘nlmixr2extra’ ... ** this is package ‘nlmixr2extra’ version ‘5.0.0’ ** package ‘nlmixr2extra’ successfully unpacked and MD5 sums checked ** using staged installation R Under development (unstable) (2026-04-21 r89924) -- "Unsuffered Consequences" Copyright (C) 2026 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. R> if (!dir.exists("data")) { + dir.create("data") + } R> R> .in <- suppressWarnings(readLines("src/Makevars.in")) R> if (.Platform$OS.type == "windows") { + .makevars <- file("src/Makevars.win", "wb") + .i <- "I" + } else { + .makevars <- file("src/Makevars", "wb") + if (any(grepl("Pop!_OS", utils::osVersion, fixed=TRUE))) { + .i <- "isystem" + } else { + .i <- "I" + } + } R> R> writeLines(gsub("@ISYSTEM@", .i, .in), + .makevars) R> close(.makevars) R> > proc.time() user system elapsed 0.139 0.016 0.147 --------[begin src/Makevars]-------- ## -*- mode: makefile; -*- PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -DARMA_USE_CXX11 PKG_LIBS = $(SHLIB_OPENMP_CXXFLAGS) $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) --------[end src/Makevars]-------- ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEvQD3k/R.INSTALL2a107748323dad/nlmixr2extra/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CXX11 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CXX11 -fpic -g -O2 -Wall -pedantic -mtune=native -c preCondInv.cpp -o preCondInv.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o nlmixr2extra.so RcppExports.o init.o preCondInv.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEvQD3k/R.INSTALL2a107748323dad/nlmixr2extra/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nlmixr2extra/00new/nlmixr2extra/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmixr2extra) begin installing package ‘nlmixr2plot’ * installing *source* package ‘nonmem2rx’ ... ** this is package ‘nonmem2rx’ version ‘0.1.9’ ** package ‘nonmem2rx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpyf2J1k/R.INSTALL2a107967ea7202/nonmem2rx/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c abbrec.c -o abbrec.o abbrec.c: In function ‘wprint_parsetree_abbrec’: abbrec.c:270:32: warning: value computed is not used [-Wunused-value] 270 | abbrecProcessSeq(name, pn) || | ^~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c abbrev.c -o abbrev.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c data.c -o data.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c input.c -o input.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lst.c -o lst.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c model.c -o model.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nonmemId.cpp -o nonmemId.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c omega.c -o omega.o omega.c: In function ‘wprint_parsetree_omega’: omega.c:372:5: warning: value computed is not used [-Wunused-value] 372 | || omegaParseNameOption(_arg_) | ^~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c records.c -o records.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sbuf.c -o sbuf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c strncmpi.c -o strncmpi.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sub.c -o sub.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tab.c -o tab.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c theta.c -o theta.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/dparser/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rxode2/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c validate.c -o validate.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o nonmem2rx.so RcppExports.o abbrec.o abbrev.o data.o init.o input.o lst.o mem.o model.o nonmemId.o omega.o records.o sbuf.o strncmpi.o sub.o tab.o theta.o util.o validate.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpyf2J1k/R.INSTALL2a107967ea7202/nonmem2rx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nonmem2rx/00new/nonmem2rx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonmem2rx) * installing *source* package ‘nlmixr2plot’ ... ** this is package ‘nlmixr2plot’ version ‘5.0.1’ ** package ‘nlmixr2plot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmixr2plot) * installing *source* package ‘alabaster.base’ ... ** this is package ‘alabaster.base’ version ‘1.11.4’ ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdmtVHs/R.INSTALL2a007c65539a99/alabaster.base/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c check_csv.cpp -o check_csv.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c check_list.cpp -o check_list.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c choose_numeric_missing_placeholder.cpp -o choose_numeric_missing_placeholder.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c is_rfc3339.cpp -o is_rfc3339.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c load_csv.cpp -o load_csv.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c load_list.cpp -o load_list.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c validate.cpp -o validate.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/assorthead/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vls.cpp -o vls.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o alabaster.base.so RcppExports.o check_csv.o check_list.o choose_numeric_missing_placeholder.o is_rfc3339.o load_csv.o load_list.o validate.o vls.o /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib/libhdf5_cpp.a /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib/libhdf5.a -L/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib -lsz -lm -ldl -lcurl -lssl -lcrypto -lz -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdmtVHs/R.INSTALL2a007c65539a99/alabaster.base/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-alabaster.base/00new/alabaster.base/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.base) begin installing package ‘alabaster.matrix’ begin installing package ‘alabaster.ranges’ * installing *source* package ‘paws.compute’ ... ** this is package ‘paws.compute’ version ‘0.9.0’ ** package ‘paws.compute’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.compute) * installing *source* package ‘paws.security.identity’ ... ** this is package ‘paws.security.identity’ version ‘0.9.0’ ** package ‘paws.security.identity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (paws.security.identity) * installing *source* package ‘alabaster.ranges’ ... ** this is package ‘alabaster.ranges’ version ‘1.11.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.ranges) * installing *source* package ‘alabaster.matrix’ ... ** this is package ‘alabaster.matrix’ version ‘1.11.0’ ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2kuKk5/R.INSTALL2a14012c058329/alabaster.matrix/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c collect_attributes.cpp -o collect_attributes.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o alabaster.matrix.so RcppExports.o collect_attributes.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2kuKk5/R.INSTALL2a14012c058329/alabaster.matrix/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-alabaster.matrix/00new/alabaster.matrix/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.matrix) begin installing package ‘alabaster.se’ * installing *source* package ‘alabaster.se’ ... ** this is package ‘alabaster.se’ version ‘1.11.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.se) begin installing package ‘alabaster.sce’ * installing *source* package ‘alabaster.sce’ ... ** this is package ‘alabaster.sce’ version ‘1.11.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alabaster.sce) begin installing package ‘scRNAseq’ * installing *source* package ‘igraph’ ... ** this is package ‘igraph’ version ‘2.3.0’ ** package ‘igraph’ successfully unpacked and MD5 sums checked ** using staged installation libxml2 include directories: -I/usr/include/libxml2 libxml2 library link flags: -lxml2 Using installed GLPK ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp0TjgZK/R.INSTALL29e9996650603e/igraph/src' gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dgetv0.f -o vendor/arpack/dgetv0.o vendor/arpack/dgetv0.f:120:23: 120 | & ( ido, bmat, itry, initv, n, j, v, ldv, resid, rnorm, | 1~~~ Warning: Unused dummy argument ‘itry’ at (1) [-Wunused-dummy-argument] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] vendor/arpack/dgetv0.f:269:72: 269 | tmvopx = tmvopx + (t3 - t2) | ^ Warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] stat.h:8:26: note: ‘t2’ declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dlaqrb.f -o vendor/arpack/dlaqrb.o vendor/arpack/dlaqrb.f:495:16: 495 | if( i2.gt.i ) | ^ Warning: ‘i2’ may be used uninitialized [-Wmaybe-uninitialized] vendor/arpack/dlaqrb.f:141:25: 141 | integer i, i1, i2, itn, its, j, k, l, m, nh, nr | ^~ note: ‘i2’ was declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dmout.f -o vendor/arpack/dmout.o vendor/arpack/dmout.f:21:43: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1 Warning: Unused dummy argument ‘a’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:35:26: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:21:51: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1~~~~~ Warning: Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:21:59: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1~~~ Warning: Unused dummy argument ‘ifmt’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:35:29: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1 Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:35:32: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1~ Warning: Unused variable ‘k1’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:35:36: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1~ Warning: Unused variable ‘k2’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:34:26: 34 | CHARACTER LINE*80 | 1~~~ Warning: Unused variable ‘line’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:35:40: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1~~ Warning: Unused variable ‘lll’ declared at (1) [-Wunused-variable] vendor/arpack/dmout.f:21:31: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1~~~ Warning: Unused dummy argument ‘lout’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:21:37: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1 Warning: Unused dummy argument ‘m’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:21:40: 21 | SUBROUTINE IGRAPHDMOUT( LOUT, M, N, A, LDA, IDIGIT, IFMT ) | 1 Warning: Unused dummy argument ‘n’ at (1) [-Wunused-dummy-argument] vendor/arpack/dmout.f:35:45: 35 | INTEGER I, J, K1, K2, LLL, NDIGIT | 1~~~~~ Warning: Unused variable ‘ndigit’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dnaitr.f -o vendor/arpack/dnaitr.o vendor/arpack/dnaitr.f:210:32: 210 | & (ido, bmat, n, k, np, nb, resid, rnorm, v, ldv, h, ldh, | 1~ Warning: Unused dummy argument ‘nb’ at (1) [-Wunused-dummy-argument] vendor/arpack/dnaitr.f:494:72: 494 | tmvopx = tmvopx + (t3 - t2) | ^ Warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] stat.h:8:26: note: ‘t2’ declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dnapps.f -o vendor/arpack/dnapps.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dnaup2.f -o vendor/arpack/dnaup2.o vendor/arpack/dnaup2.f:315:5: 315 | 10 continue | 1 Warning: Label 10 at (1) defined but not used [-Wunused-label] vendor/arpack/dnaup2.f:175:60: 175 | & ( ido, bmat, n, which, nev, np, tol, resid, mode, iupd, | 1~~~ Warning: Unused dummy argument ‘iupd’ at (1) [-Wunused-dummy-argument] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dnaupd.f -o vendor/arpack/dnaupd.o vendor/arpack/dnaupd.f:541:25: 541 | if (nb .le. 0) nb = 1 | 1~~~~~~~ Warning: Nonconforming tab character at (1) [-Wtabs] vendor/arpack/dnaupd.f:542:29: 542 | if (tol .le. zero) tol = dlamch('EpsMach') | 1~~~~~~~ Warning: Nonconforming tab character at (1) [-Wtabs] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dnconv.f -o vendor/arpack/dnconv.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dneigh.f -o vendor/arpack/dneigh.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dneupd.f -o vendor/arpack/dneupd.o stat.h:8:18: Warning: Unused variable ‘t0’ declared at (1) [-Wunused-variable] stat.h:8:22: Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] vendor/arpack/dneupd.f:537:72: 537 | & '_neupd: Threshold eigenvalue used for re-ordering') | ^ Warning: ‘thres’ may be used uninitialized [-Wmaybe-uninitialized] vendor/arpack/dneupd.f:347:43: 347 | & conds, rnorm, sep, temp, thres, vl(1,1), temp1, eps23 | ^~~~~ note: ‘thres’ was declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dngets.f -o vendor/arpack/dngets.o vendor/arpack/dngets.f:96:28: 96 | & bounds, shiftr, shifti ) | 1~~~~~ Warning: Unused dummy argument ‘shifti’ at (1) [-Wunused-dummy-argument] vendor/arpack/dngets.f:96:20: 96 | & bounds, shiftr, shifti ) | 1~~~~~ Warning: Unused dummy argument ‘shiftr’ at (1) [-Wunused-dummy-argument] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsaitr.f -o vendor/arpack/dsaitr.o vendor/arpack/dsaitr.f:484:72: 484 | tmvopx = tmvopx + (t3 - t2) | ^ Warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] stat.h:8:26: note: ‘t2’ declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsapps.f -o vendor/arpack/dsapps.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsaup2.f -o vendor/arpack/dsaup2.o vendor/arpack/dsaup2.f:812:5: 812 | 130 continue | 1 Warning: Label 130 at (1) defined but not used [-Wunused-label] vendor/arpack/dsaup2.f:326:5: 326 | 10 continue | 1 Warning: Label 10 at (1) defined but not used [-Wunused-label] vendor/arpack/dsaup2.f:180:60: 180 | & ( ido, bmat, n, which, nev, np, tol, resid, mode, iupd, | 1~~~ Warning: Unused dummy argument ‘iupd’ at (1) [-Wunused-dummy-argument] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsaupd.f -o vendor/arpack/dsaupd.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsconv.f -o vendor/arpack/dsconv.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dseigt.f -o vendor/arpack/dseigt.o vendor/arpack/dseigt.f:124:18: 124 | integer i, k, msglvl | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsesrt.f -o vendor/arpack/dsesrt.o gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dseupd.f -o vendor/arpack/dseupd.o stat.h:8:18: Warning: Unused variable ‘t0’ declared at (1) [-Wunused-variable] stat.h:8:22: Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] vendor/arpack/dseupd.f:557:49: 557 | if ( workl(irz+j) .le. thres1 .or. | ^ Warning: ‘thres1’ may be used uninitialized [-Wmaybe-uninitialized] vendor/arpack/dseupd.f:259:39: 259 | & bnorm2, rnorm, temp, thres1, thres2, tempbnd, eps23 | ^~~~~~ note: ‘thres1’ was declared here vendor/arpack/dseupd.f:557:49: 557 | if ( workl(irz+j) .le. thres1 .or. | ^ Warning: ‘thres2’ may be used uninitialized [-Wmaybe-uninitialized] vendor/arpack/dseupd.f:259:47: 259 | & bnorm2, rnorm, temp, thres1, thres2, tempbnd, eps23 | ^~~~~~ note: ‘thres2’ was declared here gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsgets.f -o vendor/arpack/dsgets.o stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsortc.f -o vendor/arpack/dsortc.o gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dsortr.f -o vendor/arpack/dsortr.o gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dstatn.f -o vendor/arpack/dstatn.o stat.h:8:18: Warning: Unused variable ‘t0’ declared at (1) [-Wunused-variable] stat.h:8:22: Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dstats.f -o vendor/arpack/dstats.o stat.h:8:18: Warning: Unused variable ‘t0’ declared at (1) [-Wunused-variable] stat.h:8:22: Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable] stat.h:8:26: Warning: Unused variable ‘t2’ declared at (1) [-Wunused-variable] stat.h:8:30: Warning: Unused variable ‘t3’ declared at (1) [-Wunused-variable] stat.h:8:34: Warning: Unused variable ‘t4’ declared at (1) [-Wunused-variable] stat.h:8:38: Warning: Unused variable ‘t5’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dstqrb.f -o vendor/arpack/dstqrb.o gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/dvout.f -o vendor/arpack/dvout.o vendor/arpack/dvout.f:32:26: 32 | INTEGER I, K1, K2, LLL, NDIGIT | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:18:44: 18 | SUBROUTINE IGRAPHDVOUT( LOUT, N, SX, IDIGIT, IFMT ) | 1~~~~~ Warning: Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument] vendor/arpack/dvout.f:18:52: 18 | SUBROUTINE IGRAPHDVOUT( LOUT, N, SX, IDIGIT, IFMT ) | 1~~~ Warning: Unused dummy argument ‘ifmt’ at (1) [-Wunused-dummy-argument] vendor/arpack/dvout.f:32:29: 32 | INTEGER I, K1, K2, LLL, NDIGIT | 1~ Warning: Unused variable ‘k1’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:32:33: 32 | INTEGER I, K1, K2, LLL, NDIGIT | 1~ Warning: Unused variable ‘k2’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:31:26: 31 | CHARACTER LINE*80 | 1~~~ Warning: Unused variable ‘line’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:32:37: 32 | INTEGER I, K1, K2, LLL, NDIGIT | 1~~ Warning: Unused variable ‘lll’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:18:31: 18 | SUBROUTINE IGRAPHDVOUT( LOUT, N, SX, IDIGIT, IFMT ) | 1~~~ Warning: Unused dummy argument ‘lout’ at (1) [-Wunused-dummy-argument] vendor/arpack/dvout.f:18:37: 18 | SUBROUTINE IGRAPHDVOUT( LOUT, N, SX, IDIGIT, IFMT ) | 1 Warning: Unused dummy argument ‘n’ at (1) [-Wunused-dummy-argument] vendor/arpack/dvout.f:32:42: 32 | INTEGER I, K1, K2, LLL, NDIGIT | 1~~~~~ Warning: Unused variable ‘ndigit’ declared at (1) [-Wunused-variable] vendor/arpack/dvout.f:18:40: 18 | SUBROUTINE IGRAPHDVOUT( LOUT, N, SX, IDIGIT, IFMT ) | 1~ Warning: Unused dummy argument ‘sx’ at (1) [-Wunused-dummy-argument] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/ivout.f -o vendor/arpack/ivout.o vendor/arpack/ivout.f:25:18: 25 | INTEGER I, NDIGIT, K1, K2, LLL | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] vendor/arpack/ivout.f:18:44: 18 | SUBROUTINE IGRAPHIVOUT (LOUT, N, IX, IDIGIT, IFMT) | 1~~~~~ Warning: Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument] vendor/arpack/ivout.f:18:52: 18 | SUBROUTINE IGRAPHIVOUT (LOUT, N, IX, IDIGIT, IFMT) | 1~~~ Warning: Unused dummy argument ‘ifmt’ at (1) [-Wunused-dummy-argument] vendor/arpack/ivout.f:18:40: 18 | SUBROUTINE IGRAPHIVOUT (LOUT, N, IX, IDIGIT, IFMT) | 1~ Warning: Unused dummy argument ‘ix’ at (1) [-Wunused-dummy-argument] vendor/arpack/ivout.f:25:29: 25 | INTEGER I, NDIGIT, K1, K2, LLL | 1~ Warning: Unused variable ‘k1’ declared at (1) [-Wunused-variable] vendor/arpack/ivout.f:25:33: 25 | INTEGER I, NDIGIT, K1, K2, LLL | 1~ Warning: Unused variable ‘k2’ declared at (1) [-Wunused-variable] vendor/arpack/ivout.f:26:20: 26 | CHARACTER LINE*80 | 1~~~ Warning: Unused variable ‘line’ declared at (1) [-Wunused-variable] vendor/arpack/ivout.f:25:37: 25 | INTEGER I, NDIGIT, K1, K2, LLL | 1~~ Warning: Unused variable ‘lll’ declared at (1) [-Wunused-variable] vendor/arpack/ivout.f:18:31: 18 | SUBROUTINE IGRAPHIVOUT (LOUT, N, IX, IDIGIT, IFMT) | 1~~~ Warning: Unused dummy argument ‘lout’ at (1) [-Wunused-dummy-argument] vendor/arpack/ivout.f:18:37: 18 | SUBROUTINE IGRAPHIVOUT (LOUT, N, IX, IDIGIT, IFMT) | 1 Warning: Unused dummy argument ‘n’ at (1) [-Wunused-dummy-argument] vendor/arpack/ivout.f:25:21: 25 | INTEGER I, NDIGIT, K1, K2, LLL | 1~~~~~ Warning: Unused variable ‘ndigit’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/second.f -o vendor/arpack/second.o vendor/arpack/second.f:23:26: 23 | REAL ETIME | 1~~~~ Warning: Unused variable ‘etime’ declared at (1) [-Wunused-variable] vendor/arpack/second.f:17:26: 17 | REAL T1 | 1~ Warning: Unused variable ‘t1’ declared at (1) [-Wunused-variable] vendor/arpack/second.f:20:26: 20 | REAL TARRAY( 2 ) | 1~~~~~~~~~~ Warning: Unused variable ‘tarray’ declared at (1) [-Wunused-variable] gfortran-15 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/arpack/wrap.f -o vendor/arpack/wrap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/betweenness.c -o vendor/cigraph/src/centrality/betweenness.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/centrality_other.c -o vendor/cigraph/src/centrality/centrality_other.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/centralization.c -o vendor/cigraph/src/centrality/centralization.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/closeness.c -o vendor/cigraph/src/centrality/closeness.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/coreness.c -o vendor/cigraph/src/centrality/coreness.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/eigenvector.c -o vendor/cigraph/src/centrality/eigenvector.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/hub_authority.c -o vendor/cigraph/src/centrality/hub_authority.o vendor/cigraph/src/centrality/hub_authority.c: In function ‘igraph_hub_and_authority_scores’: vendor/cigraph/src/centrality/hub_authority.c:392:86: warning: ‘my_hub_vector_p’ may be used uninitialized [-Wmaybe-uninitialized] 392 | igraph_i_kleinberg_unweighted_hub_to_auth(no_of_nodes, authority_vector, &VECTOR(*my_hub_vector_p)[0], &inadjlist); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ vendor/cigraph/src/centrality/hub_authority.c:222:22: note: ‘my_hub_vector_p’ was declared here 222 | igraph_vector_t *my_hub_vector_p; | ^~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/centrality/pagerank.c -o vendor/cigraph/src/centrality/pagerank.o vendor/cigraph/src/centrality/pagerank.c: In function ‘igraph_i_personalized_pagerank_arpack’: vendor/cigraph/src/centrality/pagerank.c:607:52: warning: ‘reset_sum’ may be used uninitialized [-Wmaybe-uninitialized] 607 | igraph_vector_scale(&normalized_reset, 1.0 / reset_sum); | ~~~~^~~~~~~~~~~ vendor/cigraph/src/centrality/pagerank.c:502:19: note: ‘reset_sum’ was declared here 502 | igraph_real_t reset_sum; /* used only when reset != NULL */ | ^~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack.cpp -o vendor/cigraph/src/centrality/prpack.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_base_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp: In member function ‘igraph_error_t prpack::prpack_igraph_graph::convert_from_igraph(const igraph_t*, const igraph_vector_t*, bool)’: vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp:120:31: warning: ‘p_weight’ may be used uninitialized [-Wmaybe-uninitialized] 120 | *p_weight = VECTOR(*weights)[VECTOR(neis)[j]]; | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp:19:13: note: ‘p_weight’ was declared here 19 | double *p_weight; | ^~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_result.cpp -o vendor/cigraph/src/centrality/prpack/prpack_result.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_solver.cpp -o vendor/cigraph/src/centrality/prpack/prpack_solver.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/prpack/prpack_utils.cpp -o vendor/cigraph/src/centrality/prpack/prpack_utils.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/centrality/truss.cpp -o vendor/cigraph/src/centrality/truss.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/cliquer/cliquer.c -o vendor/cigraph/src/cliques/cliquer/cliquer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/cliquer/cliquer_graph.c -o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/cliquer/reorder.c -o vendor/cigraph/src/cliques/cliquer/reorder.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/cliquer_wrapper.c -o vendor/cigraph/src/cliques/cliquer_wrapper.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/cliques.c -o vendor/cigraph/src/cliques/cliques.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/glet.c -o vendor/cigraph/src/cliques/glet.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cliques/maximal_cliques.c -o vendor/cigraph/src/cliques/maximal_cliques.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/community_misc.c -o vendor/cigraph/src/community/community_misc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/edge_betweenness.c -o vendor/cigraph/src/community/edge_betweenness.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/fast_modularity.c -o vendor/cigraph/src/community/fast_modularity.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/fluid.c -o vendor/cigraph/src/community/fluid.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/infomap/infomap.cc -o vendor/cigraph/src/community/infomap/infomap.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/infomap/infomap_FlowGraph.cc -o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/infomap/infomap_Greedy.cc -o vendor/cigraph/src/community/infomap/infomap_Greedy.o vendor/cigraph/src/community/infomap/infomap_Greedy.cc: In member function ‘bool Greedy::optimize()’: vendor/cigraph/src/community/infomap/infomap_Greedy.cc:126:36: warning: comparison of integer expressions of different signedness: ‘__gnu_cxx::__alloc_traits, long int>::value_type’ {aka ‘long int’} and ‘igraph_uint_t’ {aka ‘long unsigned int’} [-Wsign-compare] 126 | if (redirect[nb_M] >= offset) { vendor/cigraph/src/community/infomap/infomap_Greedy.cc:143:32: warning: comparison of integer expressions of different signedness: ‘__gnu_cxx::__alloc_traits, long int>::value_type’ {aka ‘long int’} and ‘igraph_uint_t’ {aka ‘long unsigned int’} [-Wsign-compare] 143 | if (redirect[nb_M] >= offset) { vendor/cigraph/src/community/infomap/infomap_Greedy.cc:184:28: warning: comparison of integer expressions of different signedness: ‘__gnu_cxx::__alloc_traits, long int>::value_type’ {aka ‘long int’} and ‘igraph_uint_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (redirect[oldM] >= offset) { gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/label_propagation.c -o vendor/cigraph/src/community/label_propagation.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/leading_eigenvector.c -o vendor/cigraph/src/community/leading_eigenvector.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/leiden.c -o vendor/cigraph/src/community/leiden.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/louvain.c -o vendor/cigraph/src/community/louvain.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/modularity.c -o vendor/cigraph/src/community/modularity.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/optimal_modularity.c -o vendor/cigraph/src/community/optimal_modularity.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/spinglass/NetDataTypes.cpp -o vendor/cigraph/src/community/spinglass/NetDataTypes.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/spinglass/NetRoutines.cpp -o vendor/cigraph/src/community/spinglass/NetRoutines.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/spinglass/clustertool.cpp -o vendor/cigraph/src/community/spinglass/clustertool.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/spinglass/pottsmodel_2.cpp -o vendor/cigraph/src/community/spinglass/pottsmodel_2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/community/voronoi.c -o vendor/cigraph/src/community/voronoi.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/walktrap/walktrap.cpp -o vendor/cigraph/src/community/walktrap/walktrap.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/walktrap/walktrap_communities.cpp -o vendor/cigraph/src/community/walktrap/walktrap_communities.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/walktrap/walktrap_graph.cpp -o vendor/cigraph/src/community/walktrap/walktrap_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/community/walktrap/walktrap_heap.cpp -o vendor/cigraph/src/community/walktrap/walktrap_heap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/connectivity/cohesive_blocks.c -o vendor/cigraph/src/connectivity/cohesive_blocks.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/connectivity/components.c -o vendor/cigraph/src/connectivity/components.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/connectivity/percolation.c -o vendor/cigraph/src/connectivity/percolation.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/connectivity/reachability.c -o vendor/cigraph/src/connectivity/reachability.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/connectivity/separators.c -o vendor/cigraph/src/connectivity/separators.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/adjacency.c -o vendor/cigraph/src/constructors/adjacency.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/atlas.c -o vendor/cigraph/src/constructors/atlas.o In file included from vendor/cigraph/include/igraph_constructors.h:29, from vendor/cigraph/src/constructors/atlas.c:19: vendor/cigraph/src/constructors/atlas.c: In function ‘igraph_atlas’: vendor/cigraph/src/constructors/atlas.c:81:18: warning: ‘v’ may be used uninitialized [-Wmaybe-uninitialized] 81 | IGRAPH_CHECK(igraph_create(graph, vendor/cigraph/include/igraph_error.h:724:40: note: in definition of macro ‘IGRAPH_CHECK’ 724 | igraph_error_t igraph_i_ret = (expr); \ | ^~~~ In file included from vendor/cigraph/include/igraph_vector.h:88, from vendor/cigraph/include/igraph_matrix.h:29, from vendor/cigraph/include/igraph_constructors.h:31: vendor/cigraph/include/igraph_vector_pmt.h:93:51: note: by argument 1 of type ‘const igraph_vector_int_t *’ to ‘igraph_vector_int_view’ declared here 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~~~~~~ vendor/cigraph/include/igraph_pmt.h:26:25: note: in definition of macro ‘CONCAT3x’ 26 | #define CONCAT3x(a,b,c) a ## _ ## b ## _ ## c | ^ vendor/cigraph/include/igraph_pmt.h:177:31: note: in expansion of macro ‘CONCAT3’ 177 | #define FUNCTION(a,c) CONCAT3(a,SHORT,c) | ^~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:42: note: in expansion of macro ‘FUNCTION’ 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~ vendor/cigraph/src/constructors/atlas.c:65:25: note: ‘v’ declared here 65 | igraph_vector_int_t v; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/basic_constructors.c -o vendor/cigraph/src/constructors/basic_constructors.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/circulant.c -o vendor/cigraph/src/constructors/circulant.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/de_bruijn.c -o vendor/cigraph/src/constructors/de_bruijn.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/famous.c -o vendor/cigraph/src/constructors/famous.o vendor/cigraph/src/constructors/famous.c: In function ‘igraph_i_famous’: vendor/cigraph/src/constructors/famous.c:259:5: warning: ‘edges’ may be used uninitialized [-Wmaybe-uninitialized] 259 | igraph_vector_int_view(&edges, data + 3, 2 * no_of_edges); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from vendor/cigraph/include/igraph_vector.h:88, from vendor/cigraph/include/igraph_matrix.h:29, from vendor/cigraph/include/igraph_constructors.h:31, from vendor/cigraph/src/constructors/famous.c:23: vendor/cigraph/include/igraph_vector_pmt.h:93:51: note: by argument 1 of type ‘const igraph_vector_int_t *’ to ‘igraph_vector_int_view’ declared here 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~~~~~~ vendor/cigraph/include/igraph_pmt.h:26:25: note: in definition of macro ‘CONCAT3x’ 26 | #define CONCAT3x(a,b,c) a ## _ ## b ## _ ## c | ^ vendor/cigraph/include/igraph_pmt.h:177:31: note: in expansion of macro ‘CONCAT3’ 177 | #define FUNCTION(a,c) CONCAT3(a,SHORT,c) | ^~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:42: note: in expansion of macro ‘FUNCTION’ 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~ vendor/cigraph/src/constructors/famous.c:257:25: note: ‘edges’ declared here 257 | igraph_vector_int_t edges; | ^~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/full.c -o vendor/cigraph/src/constructors/full.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/generalized_petersen.c -o vendor/cigraph/src/constructors/generalized_petersen.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/kautz.c -o vendor/cigraph/src/constructors/kautz.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/lattices.c -o vendor/cigraph/src/constructors/lattices.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/lcf.c -o vendor/cigraph/src/constructors/lcf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/linegraph.c -o vendor/cigraph/src/constructors/linegraph.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/mycielskian.c -o vendor/cigraph/src/constructors/mycielskian.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/prufer.c -o vendor/cigraph/src/constructors/prufer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/regular.c -o vendor/cigraph/src/constructors/regular.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/constructors/trees.c -o vendor/cigraph/src/constructors/trees.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/array.c -o vendor/cigraph/src/core/array.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/bitset.c -o vendor/cigraph/src/core/bitset.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/bitset_list.c -o vendor/cigraph/src/core/bitset_list.o In file included from vendor/cigraph/src/core/bitset_list.c:29: vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_bitset_list_sort_ind’: vendor/cigraph/src/core/typed_list.pmt:936:38: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 936 | vind, n, sizeof(ITEM_TYPE*), (void*) cmp, | ^ vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_i_bitset_list_sort_ind_cmp’: vendor/cigraph/src/core/typed_list.pmt:1087:54: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1087 | int (*cmp)(const ITEM_TYPE*, const ITEM_TYPE*) = (int (*)(const ITEM_TYPE*, const ITEM_TYPE*)) thunk; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/buckets.c -o vendor/cigraph/src/core/buckets.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/cutheap.c -o vendor/cigraph/src/core/cutheap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/dqueue.c -o vendor/cigraph/src/core/dqueue.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/error.c -o vendor/cigraph/src/core/error.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/estack.c -o vendor/cigraph/src/core/estack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/fixed_vectorlist.c -o vendor/cigraph/src/core/fixed_vectorlist.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/genheap.c -o vendor/cigraph/src/core/genheap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/grid.c -o vendor/cigraph/src/core/grid.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/heap.c -o vendor/cigraph/src/core/heap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/indheap.c -o vendor/cigraph/src/core/indheap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/interruption.c -o vendor/cigraph/src/core/interruption.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/marked_queue.c -o vendor/cigraph/src/core/marked_queue.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/matrix.c -o vendor/cigraph/src/core/matrix.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/matrix_list.c -o vendor/cigraph/src/core/matrix_list.o In file included from vendor/cigraph/src/core/matrix_list.c:32: vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_matrix_list_sort_ind’: vendor/cigraph/src/core/typed_list.pmt:936:38: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 936 | vind, n, sizeof(ITEM_TYPE*), (void*) cmp, | ^ vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_i_matrix_list_sort_ind_cmp’: vendor/cigraph/src/core/typed_list.pmt:1087:54: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1087 | int (*cmp)(const ITEM_TYPE*, const ITEM_TYPE*) = (int (*)(const ITEM_TYPE*, const ITEM_TYPE*)) thunk; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/memory.c -o vendor/cigraph/src/core/memory.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/printing.c -o vendor/cigraph/src/core/printing.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/progress.c -o vendor/cigraph/src/core/progress.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/psumtree.c -o vendor/cigraph/src/core/psumtree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/set.c -o vendor/cigraph/src/core/set.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/sparsemat.c -o vendor/cigraph/src/core/sparsemat.o vendor/cigraph/src/core/sparsemat.c: In function ‘igraph_i_sparsemat_arpack_multiply’: vendor/cigraph/src/core/sparsemat.c:1627:5: warning: ‘vto’ may be used uninitialized [-Wmaybe-uninitialized] 1627 | igraph_vector_view(&vto, to, n); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from vendor/cigraph/include/igraph_vector.h:70, from vendor/cigraph/include/igraph_sparsemat.h:30, from vendor/cigraph/src/core/sparsemat.c:24: vendor/cigraph/include/igraph_vector_pmt.h:93:51: note: by argument 1 of type ‘const igraph_vector_t *’ to ‘igraph_vector_view’ declared here 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~~~~~~ vendor/cigraph/include/igraph_pmt.h:24:23: note: in definition of macro ‘CONCAT2x’ 24 | #define CONCAT2x(a,b) a ## _ ## b | ^ vendor/cigraph/include/igraph_pmt.h:169:31: note: in expansion of macro ‘CONCAT2’ 169 | #define FUNCTION(a,c) CONCAT2(a,c) | ^~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:42: note: in expansion of macro ‘FUNCTION’ 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~ vendor/cigraph/src/core/sparsemat.c:1626:21: note: ‘vto’ declared here 1626 | igraph_vector_t vto, vfrom; | ^~~ vendor/cigraph/src/core/sparsemat.c: In function ‘igraph_i_sparsemat_arpack_solve’: vendor/cigraph/src/core/sparsemat.c:1649:5: warning: ‘vfrom’ may be used uninitialized [-Wmaybe-uninitialized] 1649 | igraph_vector_view(&vfrom, from, n); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:51: note: by argument 1 of type ‘const igraph_vector_t *’ to ‘igraph_vector_view’ declared here 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~~~~~~ vendor/cigraph/include/igraph_pmt.h:24:23: note: in definition of macro ‘CONCAT2x’ 24 | #define CONCAT2x(a,b) a ## _ ## b | ^ vendor/cigraph/include/igraph_pmt.h:169:31: note: in expansion of macro ‘CONCAT2’ 169 | #define FUNCTION(a,c) CONCAT2(a,c) | ^~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:42: note: in expansion of macro ‘FUNCTION’ 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~ vendor/cigraph/src/core/sparsemat.c:1647:21: note: ‘vfrom’ declared here 1647 | igraph_vector_t vfrom, vto; | ^~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/stack.c -o vendor/cigraph/src/core/stack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/statusbar.c -o vendor/cigraph/src/core/statusbar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/strvector.c -o vendor/cigraph/src/core/strvector.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/trie.c -o vendor/cigraph/src/core/trie.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/vector.c -o vendor/cigraph/src/core/vector.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/vector_list.c -o vendor/cigraph/src/core/vector_list.o In file included from vendor/cigraph/src/core/vector_list.c:29: vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_vector_list_sort_ind’: vendor/cigraph/src/core/typed_list.pmt:936:38: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 936 | vind, n, sizeof(ITEM_TYPE*), (void*) cmp, | ^ vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_i_vector_list_sort_ind_cmp’: vendor/cigraph/src/core/typed_list.pmt:1087:54: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1087 | int (*cmp)(const ITEM_TYPE*, const ITEM_TYPE*) = (int (*)(const ITEM_TYPE*, const ITEM_TYPE*)) thunk; | ^ In file included from vendor/cigraph/src/core/vector_list.c:35: vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_vector_int_list_sort_ind’: vendor/cigraph/src/core/typed_list.pmt:936:38: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 936 | vind, n, sizeof(ITEM_TYPE*), (void*) cmp, | ^ vendor/cigraph/src/core/typed_list.pmt: In function ‘igraph_i_vector_int_list_sort_ind_cmp’: vendor/cigraph/src/core/typed_list.pmt:1087:54: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1087 | int (*cmp)(const ITEM_TYPE*, const ITEM_TYPE*) = (int (*)(const ITEM_TYPE*, const ITEM_TYPE*)) thunk; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/core/vector_ptr.c -o vendor/cigraph/src/core/vector_ptr.o vendor/cigraph/src/core/vector_ptr.c: In function ‘igraph_vector_ptr_i_sort_ind_cmp’: vendor/cigraph/src/core/vector_ptr.c:665:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 665 | cmp_t *cmp = (cmp_t *) thunk; | ^ vendor/cigraph/src/core/vector_ptr.c: In function ‘igraph_vector_ptr_sort_ind’: vendor/cigraph/src/core/vector_ptr.c:724:46: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 724 | igraph_qsort_r(vind, n, sizeof(vind[0]), (void*)cmp, igraph_vector_ptr_i_sort_ind_cmp); | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/cycles/simple_cycles.c -o vendor/cigraph/src/cycles/simple_cycles.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/flow/flow.c -o vendor/cigraph/src/flow/flow.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/flow/flow_conversion.c -o vendor/cigraph/src/flow/flow_conversion.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/flow/st-cuts.c -o vendor/cigraph/src/flow/st-cuts.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/barabasi.c -o vendor/cigraph/src/games/barabasi.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/callaway_traits.c -o vendor/cigraph/src/games/callaway_traits.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/chung_lu.c -o vendor/cigraph/src/games/chung_lu.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/citations.c -o vendor/cigraph/src/games/citations.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/correlated.c -o vendor/cigraph/src/games/correlated.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence.c -o vendor/cigraph/src/games/degree_sequence.o In function ‘configuration’, inlined from ‘igraph_degree_sequence_game’ at vendor/cigraph/src/games/degree_sequence.c:874:16: vendor/cigraph/src/games/degree_sequence.c:94:53: warning: ‘bag2’ may be used uninitialized [-Wmaybe-uninitialized] 94 | igraph_vector_int_push_back(&edges, bag2[to]); /* ditto */ | ^ vendor/cigraph/src/games/degree_sequence.c: In function ‘igraph_degree_sequence_game’: vendor/cigraph/src/games/degree_sequence.c:46:30: note: ‘bag2’ was declared here 46 | igraph_integer_t *bag1, *bag2; | ^~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp: In member function ‘igraph_integer_t gengraph::graph_molloy_hash::shuffle(igraph_integer_t, igraph_integer_t, int)’: vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:320:34: warning: comparison of integer expressions of different signedness: ‘igraph_integer_t’ {aka ‘long int’} and ‘long unsigned int’ [-Wsign-compare] 320 | if (nb_swaps + swaps > next) { | ~~~~~~~~~~~~~~~~~^~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp: In member function ‘bool gengraph::graph_molloy_opt::make_connected()’: vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp:539:38: warning: pointer ‘trees’ may be used after ‘void operator delete [](void*)’ [-Wuse-after-free] 539 | return (trees == ffub || ((trees + 1) == ffub && fatty_edge.from < 0)); | ~~~~~~~^~~~ vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp:536:14: note: call to ‘void operator delete [](void*)’ here 536 | delete[] buff; | ^~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/dotproduct.c -o vendor/cigraph/src/games/dotproduct.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/erdos_renyi.c -o vendor/cigraph/src/games/erdos_renyi.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/establishment.c -o vendor/cigraph/src/games/establishment.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/forestfire.c -o vendor/cigraph/src/games/forestfire.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/grg.c -o vendor/cigraph/src/games/grg.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/growing_random.c -o vendor/cigraph/src/games/growing_random.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/islands.c -o vendor/cigraph/src/games/islands.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/k_regular.c -o vendor/cigraph/src/games/k_regular.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/preference.c -o vendor/cigraph/src/games/preference.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/recent_degree.c -o vendor/cigraph/src/games/recent_degree.o vendor/cigraph/src/games/recent_degree.c: In function ‘igraph_recent_degree_aging_game’: vendor/cigraph/src/games/recent_degree.c:331:23: warning: ‘no_of_neighbors’ may be used uninitialized [-Wmaybe-uninitialized] 331 | for (j = 0; j < no_of_neighbors; j++) { | ~~^~~~~~~~~~~~~~~~~ vendor/cigraph/src/games/recent_degree.c:246:22: note: ‘no_of_neighbors’ was declared here 246 | igraph_integer_t no_of_neighbors; | ^~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/sbm.c -o vendor/cigraph/src/games/sbm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/static_fitness.c -o vendor/cigraph/src/games/static_fitness.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/tree.c -o vendor/cigraph/src/games/tree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/games/watts_strogatz.c -o vendor/cigraph/src/games/watts_strogatz.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/adjlist.c -o vendor/cigraph/src/graph/adjlist.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/attributes.c -o vendor/cigraph/src/graph/attributes.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/basic_query.c -o vendor/cigraph/src/graph/basic_query.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/caching.c -o vendor/cigraph/src/graph/caching.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/cattributes.c -o vendor/cigraph/src/graph/cattributes.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/graph_list.c -o vendor/cigraph/src/graph/graph_list.o In file included from vendor/cigraph/src/graph/graph_list.c:34: vendor/cigraph/src/graph/../core/typed_list.pmt: In function ‘igraph_graph_list_sort_ind’: vendor/cigraph/src/graph/../core/typed_list.pmt:936:38: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 936 | vind, n, sizeof(ITEM_TYPE*), (void*) cmp, | ^ vendor/cigraph/src/graph/../core/typed_list.pmt: In function ‘igraph_i_graph_list_sort_ind_cmp’: vendor/cigraph/src/graph/../core/typed_list.pmt:1087:54: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 1087 | int (*cmp)(const ITEM_TYPE*, const ITEM_TYPE*) = (int (*)(const ITEM_TYPE*, const ITEM_TYPE*)) thunk; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/iterators.c -o vendor/cigraph/src/graph/iterators.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/type_common.c -o vendor/cigraph/src/graph/type_common.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/type_indexededgelist.c -o vendor/cigraph/src/graph/type_indexededgelist.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/graph/visitors.c -o vendor/cigraph/src/graph/visitors.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/hrg/hrg.cc -o vendor/cigraph/src/hrg/hrg.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/hrg/hrg_types.cc -o vendor/cigraph/src/hrg/hrg_types.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/glpk_support.c -o vendor/cigraph/src/internal/glpk_support.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/hacks.c -o vendor/cigraph/src/internal/hacks.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/lsap.c -o vendor/cigraph/src/internal/lsap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/qsort.c -o vendor/cigraph/src/internal/qsort.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/qsort_r.c -o vendor/cigraph/src/internal/qsort_r.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/utils.c -o vendor/cigraph/src/internal/utils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/internal/zeroin.c -o vendor/cigraph/src/internal/zeroin.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/dimacs.c -o vendor/cigraph/src/io/dimacs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/dl.c -o vendor/cigraph/src/io/dl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/dot.c -o vendor/cigraph/src/io/dot.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/edgelist.c -o vendor/cigraph/src/io/edgelist.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/gml-tree.c -o vendor/cigraph/src/io/gml-tree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/gml.c -o vendor/cigraph/src/io/gml.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/graphdb.c -o vendor/cigraph/src/io/graphdb.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/graphml.c -o vendor/cigraph/src/io/graphml.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/leda.c -o vendor/cigraph/src/io/leda.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/lgl.c -o vendor/cigraph/src/io/lgl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/ncol.c -o vendor/cigraph/src/io/ncol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/pajek.c -o vendor/cigraph/src/io/pajek.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/io/parse_utils.c -o vendor/cigraph/src/io/parse_utils.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss.cc -o vendor/cigraph/src/isomorphism/bliss.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/defs.cc -o vendor/cigraph/src/isomorphism/bliss/defs.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/graph.cc -o vendor/cigraph/src/isomorphism/bliss/graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/heap.cc -o vendor/cigraph/src/isomorphism/bliss/heap.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/orbit.cc -o vendor/cigraph/src/isomorphism/bliss/orbit.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/partition.cc -o vendor/cigraph/src/isomorphism/bliss/partition.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/uintseqhash.cc -o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/bliss/utils.cc -o vendor/cigraph/src/isomorphism/bliss/utils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/isoclasses.c -o vendor/cigraph/src/isomorphism/isoclasses.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/isomorphism_misc.c -o vendor/cigraph/src/isomorphism/isomorphism_misc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/lad.c -o vendor/cigraph/src/isomorphism/lad.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/queries.c -o vendor/cigraph/src/isomorphism/queries.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/isomorphism/vf2.c -o vendor/cigraph/src/isomorphism/vf2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/align.c -o vendor/cigraph/src/layout/align.o vendor/cigraph/src/layout/align.c: In function ‘igraph_layout_align’: vendor/cigraph/src/layout/align.c:256:19: warning: ‘norm2_sum_correction’ may be used uninitialized [-Wmaybe-uninitialized] 256 | norm2_sum -= norm2_sum_correction; | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ vendor/cigraph/src/layout/align.c:63:19: note: ‘norm2_sum_correction’ was declared here 63 | igraph_real_t norm2_sum_correction; | ^~~~~~~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/circular.c -o vendor/cigraph/src/layout/circular.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/davidson_harel.c -o vendor/cigraph/src/layout/davidson_harel.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/DensityGrid.cpp -o vendor/cigraph/src/layout/drl/DensityGrid.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/DensityGrid_3d.cpp -o vendor/cigraph/src/layout/drl/DensityGrid_3d.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/drl_graph.cpp -o vendor/cigraph/src/layout/drl/drl_graph.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/drl_graph_3d.cpp -o vendor/cigraph/src/layout/drl/drl_graph_3d.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/drl_layout.cpp -o vendor/cigraph/src/layout/drl/drl_layout.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/drl_layout_3d.cpp -o vendor/cigraph/src/layout/drl/drl_layout_3d.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/layout/drl/drl_parse.cpp -o vendor/cigraph/src/layout/drl/drl_parse.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/fruchterman_reingold.c -o vendor/cigraph/src/layout/fruchterman_reingold.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/gem.c -o vendor/cigraph/src/layout/gem.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/graphopt.c -o vendor/cigraph/src/layout/graphopt.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/kamada_kawai.c -o vendor/cigraph/src/layout/kamada_kawai.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/large_graph.c -o vendor/cigraph/src/layout/large_graph.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/layout_bipartite.c -o vendor/cigraph/src/layout/layout_bipartite.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/layout_grid.c -o vendor/cigraph/src/layout/layout_grid.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/layout_random.c -o vendor/cigraph/src/layout/layout_random.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/mds.c -o vendor/cigraph/src/layout/mds.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/merge_dla.c -o vendor/cigraph/src/layout/merge_dla.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/merge_grid.c -o vendor/cigraph/src/layout/merge_grid.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/reingold_tilford.c -o vendor/cigraph/src/layout/reingold_tilford.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/sugiyama.c -o vendor/cigraph/src/layout/sugiyama.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/layout/umap.c -o vendor/cigraph/src/layout/umap.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/linalg/arpack.c -o vendor/cigraph/src/linalg/arpack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/linalg/blas.c -o vendor/cigraph/src/linalg/blas.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/linalg/eigen.c -o vendor/cigraph/src/linalg/eigen.o vendor/cigraph/src/linalg/eigen.c: In function ‘igraph_i_eigen_matrix_sym_arpack_cb’: vendor/cigraph/src/linalg/eigen.c:486:9: warning: ‘vto’ may be used uninitialized [-Wmaybe-uninitialized] 486 | igraph_vector_view(&vto, to, n); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from vendor/cigraph/include/igraph_vector.h:70, from vendor/cigraph/include/igraph_matrix.h:29, from vendor/cigraph/include/igraph_arpack.h:29, from vendor/cigraph/include/igraph_eigen.h:28, from vendor/cigraph/src/linalg/eigen.c:24: vendor/cigraph/include/igraph_vector_pmt.h:93:51: note: by argument 1 of type ‘const igraph_vector_t *’ to ‘igraph_vector_view’ declared here 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~~~~~~ vendor/cigraph/include/igraph_pmt.h:24:23: note: in definition of macro ‘CONCAT2x’ 24 | #define CONCAT2x(a,b) a ## _ ## b | ^ vendor/cigraph/include/igraph_pmt.h:169:31: note: in expansion of macro ‘CONCAT2’ 169 | #define FUNCTION(a,c) CONCAT2(a,c) | ^~~~~~~ vendor/cigraph/include/igraph_vector_pmt.h:93:42: note: in expansion of macro ‘FUNCTION’ 93 | IGRAPH_EXPORT const TYPE(igraph_vector) *FUNCTION(igraph_vector, view)(const TYPE(igraph_vector) *v, | ^~~~~~~~ vendor/cigraph/src/linalg/eigen.c:485:25: note: ‘vto’ declared here 485 | igraph_vector_t vto, vfrom; | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/linalg/lapack.c -o vendor/cigraph/src/linalg/lapack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/math/complex.c -o vendor/cigraph/src/math/complex.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/math/safe_intop.c -o vendor/cigraph/src/math/safe_intop.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/math/utils.c -o vendor/cigraph/src/math/utils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/bipartite.c -o vendor/cigraph/src/misc/bipartite.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/chordality.c -o vendor/cigraph/src/misc/chordality.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/cocitation.c -o vendor/cigraph/src/misc/cocitation.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/coloring.c -o vendor/cigraph/src/misc/coloring.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/conversion.c -o vendor/cigraph/src/misc/conversion.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/cycle_bases.c -o vendor/cigraph/src/misc/cycle_bases.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/misc/degree_sequence.cpp -o vendor/cigraph/src/misc/degree_sequence.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/embedding.c -o vendor/cigraph/src/misc/embedding.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/feedback_arc_set.c -o vendor/cigraph/src/misc/feedback_arc_set.o In file included from vendor/cigraph/include/igraph_vector.h:30, from vendor/cigraph/include/igraph_datatype.h:29, from vendor/cigraph/include/igraph_structural.h:28, from vendor/cigraph/src/misc/feedback_arc_set.c:19: vendor/cigraph/src/misc/feedback_arc_set.c: In function ‘igraph_i_find_cycle’: vendor/cigraph/src/misc/feedback_arc_set.c:167:26: warning: ‘ea’ may be used uninitialized [-Wmaybe-uninitialized] 167 | IGRAPH_CHECK(igraph_vector_int_push_back(edges, ea)); vendor/cigraph/include/igraph_error.h:724:40: note: in definition of macro ‘IGRAPH_CHECK’ 724 | igraph_error_t igraph_i_ret = (expr); \ | ^~~~ vendor/cigraph/src/misc/feedback_arc_set.c:61:22: note: ‘ea’ was declared here 61 | igraph_integer_t ea, va; | ^~ vendor/cigraph/src/misc/feedback_arc_set.c:154:35: warning: ‘va’ may be used uninitialized [-Wmaybe-uninitialized] 154 | while (VECTOR(vpath)[i-1] != va) i--; vendor/cigraph/src/misc/feedback_arc_set.c:61:26: note: ‘va’ was declared here 61 | igraph_integer_t ea, va; | ^~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/graphicality.c -o vendor/cigraph/src/misc/graphicality.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/matching.c -o vendor/cigraph/src/misc/matching.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/microscopic_update.c -o vendor/cigraph/src/misc/microscopic_update.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/mixing.c -o vendor/cigraph/src/misc/mixing.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/motifs.c -o vendor/cigraph/src/misc/motifs.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/cigraph/src/misc/order_cycle.cpp -o vendor/cigraph/src/misc/order_cycle.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/other.c -o vendor/cigraph/src/misc/other.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/power_law_fit.c -o vendor/cigraph/src/misc/power_law_fit.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/scan.c -o vendor/cigraph/src/misc/scan.o vendor/cigraph/src/misc/scan.c:76:23: warning: ‘igraph_i_trans4_il_simplify’ defined but not used [-Wunused-function] 76 | static igraph_error_t igraph_i_trans4_il_simplify(const igraph_t *graph, igraph_inclist_t *il, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/sir.c -o vendor/cigraph/src/misc/sir.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/misc/spanning_trees.c -o vendor/cigraph/src/misc/spanning_trees.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/add_edge.c -o vendor/cigraph/src/operators/add_edge.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/complementer.c -o vendor/cigraph/src/operators/complementer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/compose.c -o vendor/cigraph/src/operators/compose.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/connect_neighborhood.c -o vendor/cigraph/src/operators/connect_neighborhood.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/contract.c -o vendor/cigraph/src/operators/contract.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/difference.c -o vendor/cigraph/src/operators/difference.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/disjoint_union.c -o vendor/cigraph/src/operators/disjoint_union.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/intersection.c -o vendor/cigraph/src/operators/intersection.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/join.c -o vendor/cigraph/src/operators/join.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/misc_internal.c -o vendor/cigraph/src/operators/misc_internal.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/permute.c -o vendor/cigraph/src/operators/permute.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/products.c -o vendor/cigraph/src/operators/products.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/reverse.c -o vendor/cigraph/src/operators/reverse.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/rewire.c -o vendor/cigraph/src/operators/rewire.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/rewire_edges.c -o vendor/cigraph/src/operators/rewire_edges.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/simplify.c -o vendor/cigraph/src/operators/simplify.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/subgraph.c -o vendor/cigraph/src/operators/subgraph.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/operators/union.c -o vendor/cigraph/src/operators/union.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/all_shortest_paths.c -o vendor/cigraph/src/paths/all_shortest_paths.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/astar.c -o vendor/cigraph/src/paths/astar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/bellman_ford.c -o vendor/cigraph/src/paths/bellman_ford.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/dijkstra.c -o vendor/cigraph/src/paths/dijkstra.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/distances.c -o vendor/cigraph/src/paths/distances.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/eulerian.c -o vendor/cigraph/src/paths/eulerian.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/floyd_warshall.c -o vendor/cigraph/src/paths/floyd_warshall.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/histogram.c -o vendor/cigraph/src/paths/histogram.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/johnson.c -o vendor/cigraph/src/paths/johnson.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/random_walk.c -o vendor/cigraph/src/paths/random_walk.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/shortest_paths.c -o vendor/cigraph/src/paths/shortest_paths.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/simple_paths.c -o vendor/cigraph/src/paths/simple_paths.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/sparsifier.c -o vendor/cigraph/src/paths/sparsifier.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/unweighted.c -o vendor/cigraph/src/paths/unweighted.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/voronoi.c -o vendor/cigraph/src/paths/voronoi.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/paths/widest_paths.c -o vendor/cigraph/src/paths/widest_paths.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/basic_properties.c -o vendor/cigraph/src/properties/basic_properties.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/complete.c -o vendor/cigraph/src/properties/complete.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/constraint.c -o vendor/cigraph/src/properties/constraint.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/convergence_degree.c -o vendor/cigraph/src/properties/convergence_degree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/dag.c -o vendor/cigraph/src/properties/dag.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/degrees.c -o vendor/cigraph/src/properties/degrees.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/ecc.c -o vendor/cigraph/src/properties/ecc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/girth.c -o vendor/cigraph/src/properties/girth.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/loops.c -o vendor/cigraph/src/properties/loops.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/multiplicity.c -o vendor/cigraph/src/properties/multiplicity.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/neighborhood.c -o vendor/cigraph/src/properties/neighborhood.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/perfect.c -o vendor/cigraph/src/properties/perfect.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/rich_club.c -o vendor/cigraph/src/properties/rich_club.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/spectral.c -o vendor/cigraph/src/properties/spectral.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/trees.c -o vendor/cigraph/src/properties/trees.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/properties/triangles.c -o vendor/cigraph/src/properties/triangles.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/random/random.c -o vendor/cigraph/src/random/random.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/random/rng_glibc2.c -o vendor/cigraph/src/random/rng_glibc2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/random/rng_mt19937.c -o vendor/cigraph/src/random/rng_mt19937.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/random/rng_pcg32.c -o vendor/cigraph/src/random/rng_pcg32.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/random/rng_pcg64.c -o vendor/cigraph/src/random/rng_pcg64.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/src/version.c -o vendor/cigraph/src/version.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_add.c -o vendor/cigraph/vendor/cs/cs_add.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_amd.c -o vendor/cigraph/vendor/cs/cs_amd.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_chol.c -o vendor/cigraph/vendor/cs/cs_chol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_cholsol.c -o vendor/cigraph/vendor/cs/cs_cholsol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_compress.c -o vendor/cigraph/vendor/cs/cs_compress.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_counts.c -o vendor/cigraph/vendor/cs/cs_counts.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_cumsum.c -o vendor/cigraph/vendor/cs/cs_cumsum.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_dfs.c -o vendor/cigraph/vendor/cs/cs_dfs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_dmperm.c -o vendor/cigraph/vendor/cs/cs_dmperm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_droptol.c -o vendor/cigraph/vendor/cs/cs_droptol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_dropzeros.c -o vendor/cigraph/vendor/cs/cs_dropzeros.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_dupl.c -o vendor/cigraph/vendor/cs/cs_dupl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_entry.c -o vendor/cigraph/vendor/cs/cs_entry.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_ereach.c -o vendor/cigraph/vendor/cs/cs_ereach.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_etree.c -o vendor/cigraph/vendor/cs/cs_etree.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_fkeep.c -o vendor/cigraph/vendor/cs/cs_fkeep.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_gaxpy.c -o vendor/cigraph/vendor/cs/cs_gaxpy.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_happly.c -o vendor/cigraph/vendor/cs/cs_happly.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_house.c -o vendor/cigraph/vendor/cs/cs_house.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_ipvec.c -o vendor/cigraph/vendor/cs/cs_ipvec.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_leaf.c -o vendor/cigraph/vendor/cs/cs_leaf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_load.c -o vendor/cigraph/vendor/cs/cs_load.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_lsolve.c -o vendor/cigraph/vendor/cs/cs_lsolve.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_ltsolve.c -o vendor/cigraph/vendor/cs/cs_ltsolve.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_lu.c -o vendor/cigraph/vendor/cs/cs_lu.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_lusol.c -o vendor/cigraph/vendor/cs/cs_lusol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_malloc.c -o vendor/cigraph/vendor/cs/cs_malloc.o vendor/cigraph/vendor/cs/cs_malloc.c: In function ‘cs_igraph_realloc’: vendor/cigraph/vendor/cs/cs_malloc.c:34:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 34 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ vendor/cigraph/vendor/cs/cs_malloc.c:32:12: note: call to ‘realloc’ here 32 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_maxtrans.c -o vendor/cigraph/vendor/cs/cs_maxtrans.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_multiply.c -o vendor/cigraph/vendor/cs/cs_multiply.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_norm.c -o vendor/cigraph/vendor/cs/cs_norm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_permute.c -o vendor/cigraph/vendor/cs/cs_permute.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_pinv.c -o vendor/cigraph/vendor/cs/cs_pinv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_post.c -o vendor/cigraph/vendor/cs/cs_post.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_print.c -o vendor/cigraph/vendor/cs/cs_print.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_pvec.c -o vendor/cigraph/vendor/cs/cs_pvec.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_qr.c -o vendor/cigraph/vendor/cs/cs_qr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_qrsol.c -o vendor/cigraph/vendor/cs/cs_qrsol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_randperm.c -o vendor/cigraph/vendor/cs/cs_randperm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_reach.c -o vendor/cigraph/vendor/cs/cs_reach.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_scatter.c -o vendor/cigraph/vendor/cs/cs_scatter.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_scc.c -o vendor/cigraph/vendor/cs/cs_scc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_schol.c -o vendor/cigraph/vendor/cs/cs_schol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_spsolve.c -o vendor/cigraph/vendor/cs/cs_spsolve.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_sqr.c -o vendor/cigraph/vendor/cs/cs_sqr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_symperm.c -o vendor/cigraph/vendor/cs/cs_symperm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_tdfs.c -o vendor/cigraph/vendor/cs/cs_tdfs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_transpose.c -o vendor/cigraph/vendor/cs/cs_transpose.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_updown.c -o vendor/cigraph/vendor/cs/cs_updown.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_usolve.c -o vendor/cigraph/vendor/cs/cs_usolve.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_util.c -o vendor/cigraph/vendor/cs/cs_util.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/cs/cs_utsolve.c -o vendor/cigraph/vendor/cs/cs_utsolve.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-advance-128.c -o vendor/cigraph/vendor/pcg/pcg-advance-128.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-advance-64.c -o vendor/cigraph/vendor/pcg/pcg-advance-64.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-output-128.c -o vendor/cigraph/vendor/pcg/pcg-output-128.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-output-32.c -o vendor/cigraph/vendor/pcg/pcg-output-32.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-output-64.c -o vendor/cigraph/vendor/pcg/pcg-output-64.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-rngs-128.c -o vendor/cigraph/vendor/pcg/pcg-rngs-128.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/pcg/pcg-rngs-64.c -o vendor/cigraph/vendor/pcg/pcg-rngs-64.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/gss.c -o vendor/cigraph/vendor/plfit/gss.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/hzeta.c -o vendor/cigraph/vendor/plfit/hzeta.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/kolmogorov.c -o vendor/cigraph/vendor/plfit/kolmogorov.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/lbfgs.c -o vendor/cigraph/vendor/plfit/lbfgs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/mt.c -o vendor/cigraph/vendor/plfit/mt.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/options.c -o vendor/cigraph/vendor/plfit/options.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/plfit.c -o vendor/cigraph/vendor/plfit/plfit.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/plfit_error.c -o vendor/cigraph/vendor/plfit/plfit_error.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/rbinom.c -o vendor/cigraph/vendor/plfit/rbinom.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/plfit/sampling.c -o vendor/cigraph/vendor/plfit/sampling.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/dl-lexer.c -o vendor/io/dl-lexer.o src/vendor/io/dl-lexer.c: In function ‘yy_fatal_error’: src/vendor/cigraph/src/io/dl-lexer.l:56:33: warning: statement with no effect [-Wunused-value] src/vendor/io/dl-lexer.c:2198:2: note: in expansion of macro ‘fprintf’ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/dl-parser.c -o vendor/io/dl-parser.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/gml-lexer.c -o vendor/io/gml-lexer.o src/vendor/io/gml-lexer.c: In function ‘yy_fatal_error’: src/vendor/cigraph/src/io/gml-lexer.l:54:33: warning: statement with no effect [-Wunused-value] src/vendor/io/gml-lexer.c:1998:2: note: in expansion of macro ‘fprintf’ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/gml-parser.c -o vendor/io/gml-parser.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/lgl-lexer.c -o vendor/io/lgl-lexer.o src/vendor/io/lgl-lexer.c: In function ‘yy_fatal_error’: src/vendor/cigraph/src/io/lgl-lexer.l:56:33: warning: statement with no effect [-Wunused-value] src/vendor/io/lgl-lexer.c:1932:2: note: in expansion of macro ‘fprintf’ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/lgl-parser.c -o vendor/io/lgl-parser.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/ncol-lexer.c -o vendor/io/ncol-lexer.o src/vendor/io/ncol-lexer.c: In function ‘yy_fatal_error’: src/vendor/cigraph/src/io/ncol-lexer.l:56:33: warning: statement with no effect [-Wunused-value] src/vendor/io/ncol-lexer.c:1926:2: note: in expansion of macro ‘fprintf’ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/ncol-parser.c -o vendor/io/ncol-parser.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/pajek-lexer.c -o vendor/io/pajek-lexer.o src/vendor/io/pajek-lexer.c: In function ‘yy_fatal_error’: src/vendor/cigraph/src/io/pajek-lexer.l:57:33: warning: statement with no effect [-Wunused-value] src/vendor/io/pajek-lexer.c:2382:2: note: in expansion of macro ‘fprintf’ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/io/pajek-parser.c -o vendor/io/pajek-parser.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Color.cpp -o vendor/simpleraytracer/Color.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Light.cpp -o vendor/simpleraytracer/Light.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Point.cpp -o vendor/simpleraytracer/Point.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Ray.cpp -o vendor/simpleraytracer/Ray.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/RayTracer.cpp -o vendor/simpleraytracer/RayTracer.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/RayVector.cpp -o vendor/simpleraytracer/RayVector.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Shape.cpp -o vendor/simpleraytracer/Shape.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Sphere.cpp -o vendor/simpleraytracer/Sphere.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/Triangle.cpp -o vendor/simpleraytracer/Triangle.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c vendor/simpleraytracer/unit_limiter.cpp -o vendor/simpleraytracer/unit_limiter.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/clear.c -o vendor/uuid/clear.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/compare.c -o vendor/uuid/compare.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/copy.c -o vendor/uuid/copy.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/gen_uuid.c -o vendor/uuid/gen_uuid.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/isnull.c -o vendor/uuid/isnull.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/pack.c -o vendor/uuid/pack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/parse.c -o vendor/uuid/parse.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/unpack.c -o vendor/uuid/unpack.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/uuid/unparse.c -o vendor/uuid/unparse.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rcallback.c -o rcallback.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rinterface.c -o rinterface.o rinterface.c: In function ‘R_igraph_is_bipartite_coloring’: rinterface.c:18576:18: warning: unused variable ‘r_names’ [-Wunused-variable] 18576 | SEXP r_result, r_names; | ^~~~~~~ rinterface.c:18574:8: warning: unused variable ‘mode’ [-Wunused-variable] 18574 | SEXP mode; | ^~~~ In file included from rinterface.c:25: rinterface.c: In function ‘R_igraph_pagerank’: rinterface.c:5354:18: warning: ‘c_options’ may be used uninitialized [-Wmaybe-uninitialized] 5354 | IGRAPH_R_CHECK(igraph_pagerank(&c_graph, c_algo, &c_vector, &c_value, c_vids, c_directed, c_damping, (Rf_isNull(weights) ? 0 : &c_weights), c_options)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:5326:9: note: ‘c_options’ was declared here 5326 | void* c_options; | ^~~~~~~~~ rinterface.c: In function ‘R_igraph_personalized_pagerank’: rinterface.c:5430:18: warning: ‘c_options’ may be used uninitialized [-Wmaybe-uninitialized] 5430 | IGRAPH_R_CHECK(igraph_personalized_pagerank(&c_graph, c_algo, &c_vector, &c_value, c_vids, c_directed, c_damping, (Rf_isNull(personalized) ? 0 : &c_personalized), (Rf_isNull(weights) ? 0 : &c_weights), c_options)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:5399:9: note: ‘c_options’ was declared here 5399 | void* c_options; | ^~~~~~~~~ rinterface.c: In function ‘R_igraph_personalized_pagerank_vs’: rinterface.c:5505:18: warning: ‘c_options’ may be used uninitialized [-Wmaybe-uninitialized] 5505 | IGRAPH_R_CHECK(igraph_personalized_pagerank_vs(&c_graph, c_algo, &c_vector, &c_value, c_vids, c_directed, c_damping, c_reset_vids, (Rf_isNull(weights) ? 0 : &c_weights), c_options)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:5475:9: note: ‘c_options’ was declared here 5475 | void* c_options; | ^~~~~~~~~ rinterface.c: In function ‘R_igraph_maximal_cliques_subset’: rinterface.c:9815:18: warning: ‘c_outfile’ may be used uninitialized [-Wmaybe-uninitialized] 9815 | IGRAPH_R_CHECK(igraph_maximal_cliques_subset(&c_graph, &c_subset, &c_res, &c_no, (Rf_isNull(outfile) ? 0 : c_outfile), c_min_size, c_max_size)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:9792:9: note: ‘c_outfile’ was declared here 9792 | FILE* c_outfile; | ^~~~~~~~~ rinterface.c: In function ‘R_igraph_write_graph_gml’: rinterface.c:14013:18: warning: ‘c_creator’ may be used uninitialized [-Wmaybe-uninitialized] 14013 | IGRAPH_R_CHECK(igraph_write_graph_gml(&c_graph, c_outstream, c_options, &c_id, (Rf_isNull(creator) ? 0 : c_creator))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:14001:15: note: ‘c_creator’ was declared here 14001 | const char* c_creator; | ^~~~~~~~~ rinterface.c: In function ‘R_igraph_fundamental_cycles’: rinterface.c:18113:18: warning: ‘c_start’ may be used uninitialized [-Wmaybe-uninitialized] 18113 | IGRAPH_R_CHECK(igraph_fundamental_cycles(&c_graph, &c_basis, (Rf_isNull(start) ? 0 : c_start), c_bfs_cutoff, (Rf_isNull(weights) ? 0 : &c_weights))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:18094:20: note: ‘c_start’ was declared here 18094 | igraph_integer_t c_start; | ^~~~~~~ rinterface.c: In function ‘R_igraph_random_spanning_tree’: rinterface.c:18458:18: warning: ‘c_vid’ may be used uninitialized [-Wmaybe-uninitialized] 18458 | IGRAPH_R_CHECK(igraph_random_spanning_tree(&c_graph, &c_res, (Rf_isNull(vid) ? 0 : c_vid))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:18446:20: note: ‘c_vid’ was declared here 18446 | igraph_integer_t c_vid; | ^~~~~ rinterface.c: In function ‘R_igraph_vertex_path_from_edge_path’: rinterface.c:18981:18: warning: ‘c_start’ may be used uninitialized [-Wmaybe-uninitialized] 18981 | IGRAPH_R_CHECK(igraph_vertex_path_from_edge_path(&c_graph, (Rf_isNull(start) ? 0 : c_start), &c_edge_path, &c_vertex_path, c_mode)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rinterface.h:120:35: note: in definition of macro ‘IGRAPH_R_CHECK’ 120 | igraph_error_type_t __c = func; \ | ^~~~ rinterface.c:18963:20: note: ‘c_start’ was declared here 18963 | igraph_integer_t c_start; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rinterface_extra.c -o rinterface_extra.o rinterface_extra.c: In function ‘Rz_SEXP_to_attr_comb’: rinterface_extra.c:361:12: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 361 | func=(igraph_function_pointer_t) (void*) VECTOR_ELT(input, i); | ^ rinterface_extra.c: In function ‘Rx_igraph_attribute_combine_vertices’: rinterface_extra.c:1970:21: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 1970 | func = (SEXP) (void*) voidfunc; | ^ rinterface_extra.c: In function ‘Rx_igraph_attribute_combine_edges’: rinterface_extra.c:2136:21: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 2136 | func = (SEXP) (void*) voidfunc; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rrandom.c -o rrandom.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c test_error_with_source.c -o test_error_with_source.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c uuid.c -o uuid.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c cpprinterface.cpp -o cpprinterface.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c simpleraytracer.cpp -o simpleraytracer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vendor/cigraph/vendor/mini-gmp/mini-gmp.c -o vendor/cigraph/vendor/mini-gmp/mini-gmp.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o igraph.so vendor/arpack/dgetv0.o vendor/arpack/dlaqrb.o vendor/arpack/dmout.o vendor/arpack/dnaitr.o vendor/arpack/dnapps.o vendor/arpack/dnaup2.o vendor/arpack/dnaupd.o vendor/arpack/dnconv.o vendor/arpack/dneigh.o vendor/arpack/dneupd.o vendor/arpack/dngets.o vendor/arpack/dsaitr.o vendor/arpack/dsapps.o vendor/arpack/dsaup2.o vendor/arpack/dsaupd.o vendor/arpack/dsconv.o vendor/arpack/dseigt.o vendor/arpack/dsesrt.o vendor/arpack/dseupd.o vendor/arpack/dsgets.o vendor/arpack/dsortc.o vendor/arpack/dsortr.o vendor/arpack/dstatn.o vendor/arpack/dstats.o vendor/arpack/dstqrb.o vendor/arpack/dvout.o vendor/arpack/ivout.o vendor/arpack/second.o vendor/arpack/wrap.o vendor/cigraph/src/centrality/betweenness.o vendor/cigraph/src/centrality/centrality_other.o vendor/cigraph/src/centrality/centralization.o vendor/cigraph/src/centrality/closeness.o vendor/cigraph/src/centrality/coreness.o vendor/cigraph/src/centrality/eigenvector.o vendor/cigraph/src/centrality/hub_authority.o vendor/cigraph/src/centrality/pagerank.o vendor/cigraph/src/centrality/prpack.o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o vendor/cigraph/src/centrality/prpack/prpack_result.o vendor/cigraph/src/centrality/prpack/prpack_solver.o vendor/cigraph/src/centrality/prpack/prpack_utils.o vendor/cigraph/src/centrality/truss.o vendor/cigraph/src/cliques/cliquer/cliquer.o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o vendor/cigraph/src/cliques/cliquer/reorder.o vendor/cigraph/src/cliques/cliquer_wrapper.o vendor/cigraph/src/cliques/cliques.o vendor/cigraph/src/cliques/glet.o vendor/cigraph/src/cliques/maximal_cliques.o vendor/cigraph/src/community/community_misc.o vendor/cigraph/src/community/edge_betweenness.o vendor/cigraph/src/community/fast_modularity.o vendor/cigraph/src/community/fluid.o vendor/cigraph/src/community/infomap/infomap.o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o vendor/cigraph/src/community/infomap/infomap_Greedy.o vendor/cigraph/src/community/label_propagation.o vendor/cigraph/src/community/leading_eigenvector.o vendor/cigraph/src/community/leiden.o vendor/cigraph/src/community/louvain.o vendor/cigraph/src/community/modularity.o vendor/cigraph/src/community/optimal_modularity.o vendor/cigraph/src/community/spinglass/NetDataTypes.o vendor/cigraph/src/community/spinglass/NetRoutines.o vendor/cigraph/src/community/spinglass/clustertool.o vendor/cigraph/src/community/spinglass/pottsmodel_2.o vendor/cigraph/src/community/voronoi.o vendor/cigraph/src/community/walktrap/walktrap.o vendor/cigraph/src/community/walktrap/walktrap_communities.o 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vendor/io/gml-parser.o vendor/io/lgl-lexer.o vendor/io/lgl-parser.o vendor/io/ncol-lexer.o vendor/io/ncol-parser.o vendor/io/pajek-lexer.o vendor/io/pajek-parser.o vendor/simpleraytracer/Color.o vendor/simpleraytracer/Light.o vendor/simpleraytracer/Point.o vendor/simpleraytracer/Ray.o vendor/simpleraytracer/RayTracer.o vendor/simpleraytracer/RayVector.o vendor/simpleraytracer/Shape.o vendor/simpleraytracer/Sphere.o vendor/simpleraytracer/Triangle.o vendor/simpleraytracer/unit_limiter.o vendor/uuid/clear.o vendor/uuid/compare.o vendor/uuid/copy.o vendor/uuid/gen_uuid.o vendor/uuid/isnull.o vendor/uuid/pack.o vendor/uuid/parse.o vendor/uuid/unpack.o vendor/uuid/unparse.o rcallback.o rinterface.o rinterface_extra.o rrandom.o test_error_with_source.o uuid.o cpp11.o cpprinterface.o init.o simpleraytracer.o vendor/cigraph/vendor/mini-gmp/mini-gmp.o -lxml2 -lglpk -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0TjgZK/R.INSTALL29e9996650603e/igraph/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-igraph/00new/igraph/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (igraph) begin installing package ‘poems’ begin installing package ‘tarchetypes’ * installing *source* package ‘scRNAseq’ ... ** this is package ‘scRNAseq’ version ‘2.25.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scRNAseq) * installing *source* package ‘tarchetypes’ ... ** this is package ‘tarchetypes’ version ‘0.14.1’ ** package ‘tarchetypes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tarchetypes) * installing *source* package ‘poems’ ... ** this is package ‘poems’ version ‘1.4.0’ ** package ‘poems’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (poems) checking qs2_0.2.0.tar.gz ... checking babelmixr2_0.1.11.tar.gz ... checking bdc_1.1.6.tar.gz ... checking epizootic_2.0.0.tar.gz ... checking espadon_1.11.3.tar.gz ... checking fastbioclim_0.4.1.tar.gz ... checking healthyAddress_0.5.1.tar.gz ... checking jagstargets_1.2.2.tar.gz ... checking LAGOSNE_2.0.5.tar.gz ... checking multidplyr_0.1.4.tar.gz ... checking nonmem2rx_0.1.9.tar.gz ... checking pizzarr_0.2.0.tar.gz ... checking poems_1.4.0.tar.gz ... checking rxode2_5.0.2.tar.gz ... checking SeuratExplorer_0.1.4.tar.gz ... checking shinymrp_0.10.0.tar.gz ... checking SimDesign_2.25.tar.gz ... checking sourcoise_1.1.0.tar.gz ... checking spada_0.1.5.tar.gz ... checking SpaDES.core_3.0.4.tar.gz ... checking starburst_0.3.8.tar.gz ... checking tabs_0.2.0.tar.gz ... checking bregr_1.4.0.tar.gz ... checking fastreg_0.8.17.tar.gz ... checking glow_0.13.0.tar.gz ... checking henna_0.7.5.tar.gz ... checking LISTO_0.6.5.tar.gz ... checking mlr3oml_0.12.0.tar.gz ... checking SerolyzeR_1.4.1.tar.gz ... checking vcr_2.1.0.tar.gz ... checking targets_1.12.0.tar.gz ... checking xfun_0.57.tar.gz ... checking nlmixr2est_5.0.2.tar.gz ... checking zarr_0.3.0.tar.gz ... checking rio_1.3.0.tar.gz ... checking PhenotypeR_0.4.0.tar.gz ... checking nlmixr2lib_0.3.2.tar.gz ... checking pins_1.4.2.tar.gz ... checking reproducible_3.0.0.tar.gz ... Depends: Package: qs2 Depends: R (>= 3.5.0) Imports: Rcpp, RcppParallel, stringfish (>= 0.18.0) LinkingTo: Rcpp, RcppParallel Timings: user system elapsed qs2 108.622 8.523 120.421 Results: Check status summary: OK Source packages 1 Reverse depends 38 Check results summary: qs2 ... OK rdepends_babelmixr2 ... OK rdepends_bdc ... OK rdepends_bregr ... OK rdepends_epizootic ... OK rdepends_espadon ... OK rdepends_fastbioclim ... OK rdepends_fastreg ... OK rdepends_glow ... OK rdepends_healthyAddress ... OK rdepends_henna ... OK rdepends_jagstargets ... OK rdepends_LAGOSNE ... OK rdepends_LISTO ... OK rdepends_mlr3oml ... OK rdepends_multidplyr ... OK rdepends_nlmixr2est ... OK rdepends_nlmixr2lib ... OK rdepends_nonmem2rx ... OK rdepends_PhenotypeR ... OK rdepends_pins ... OK rdepends_pizzarr ... OK rdepends_poems ... OK rdepends_reproducible ... OK rdepends_rio ... OK rdepends_rxode2 ... OK rdepends_SerolyzeR ... OK rdepends_SeuratExplorer ... OK rdepends_shinymrp ... OK rdepends_SimDesign ... OK rdepends_sourcoise ... OK rdepends_spada ... OK rdepends_SpaDES.core ... OK rdepends_starburst ... OK rdepends_tabs ... OK rdepends_targets ... OK rdepends_vcr ... OK rdepends_xfun ... OK rdepends_zarr ... OK