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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(pvEBayes)
> 
> test_check("pvEBayes")
The alpha value selected under AIC is 0,
The alpha value selected under BIC is 0. 
  alpha      AIC      BIC num_mixture
1   0.0 1226.166 1273.831         200
2   0.1 1226.166 1273.831         200
3   0.3 1226.166 1273.831         200
4   0.5 1226.166 1273.831         200
5   0.7 1226.166 1273.831         200
6   0.9 1226.166 1273.831         200
The hyperparameters selected under AIC is (p = 120, c0 = 0.01),
The hyperparameters selected under BIC is (p = 120, c0 = 0.01)., 
     p    c0      AIC      BIC
1   40 1e-05 34.10699 34.42255
2   60 1e-05 34.90759 35.25496
3   80 1e-05 35.72419 36.10400
4  100 1e-05 37.80020 38.26246
5  120 1e-05 38.73868 39.23823
6   40 1e-04 29.66394 29.80296
7   60 1e-04 32.01391 32.24629
8   80 1e-04 33.63691 33.93376
9  100 1e-04 34.71119 35.05072
10 120 1e-04 35.61688 35.99239
11  40 1e-03 22.79611 22.66169
12  60 1e-03 26.97632 27.00808
13  80 1e-03 29.51066 29.64316
14 100 1e-03 30.55376 30.72775
15 120 1e-03 31.16307 31.36130
16  40 1e-02 24.28846 24.19956
17  60 1e-02 23.20719 23.07582
18  80 1e-02 21.68559 21.49393
19 100 1e-02 20.64329 20.41039
20 120 1e-02 19.15179 18.85971
21  40 1e-01      Inf      Inf
22  60 1e-01 29.22741 29.31725
23  80 1e-01      Inf      Inf
24 100 1e-01 28.85673 28.93186
25 120 1e-01      Inf      Inf
Object of class 'pvEBayes'

General-gamma model with hyperparameter alpha = 0.5.
Estimated prior is a mixture of 200 gamma distributions.

Running time of the general-gamma model fitting: 0.1327 seconds.
Running time for posterior draws 
(1000 signal strength posterior draws per AE-drug pair):0.0049 seconds.

Extract estimated prior parameters, discovered signals
and signal strength posterior draws using `summary()`.[ FAIL 0 | WARN 4 | SKIP 0 | PASS 19 ]

[ FAIL 0 | WARN 4 | SKIP 0 | PASS 19 ]
> 
> proc.time()
   user  system elapsed 
  19.32    1.82   21.18