* using log directory 'd:/RCompile/CRANincoming/R-devel/ptm.Rcheck'
* using R Under development (unstable) (2024-05-06 r86526 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'ptm/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ptm' version '0.2.7'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Juan Carlos Aledo <caledo@uma.es>'

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  Aledo (15:93)
  PTMs (6:87, 8:108)
  Translational (3:33)
  methionine (7:54)
  overrepresented (11:65)
  sulfoxidation (7:37, 8:38)
  translational (6:58)

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2024-05-04 as issues were not corrected
    in time.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ptm' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [21s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking examples ... [18s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [36s] OK
  Running 'testthat.R' [36s]
* checking PDF version of manual ... [22s] OK
* checking HTML version of manual ... [11s] OK
* DONE
Status: 1 NOTE