library(pseval) library(survival) test_that("Testing bootstrap and TE estimation", { set.seed(52001) fakedata <- generate_example_data(n = 200) binary.ps <- psdesign(data = fakedata, Z = Z, Y = Y.obs, S = S.obs, BIP = BIP) + integrate_parametric(S.1 ~ BIP) + risk_binary(D = 10) + ps_estimate() binary.boot <- binary.ps + ps_bootstrap(n.boots = 50, progress.bar = FALSE, start = binary.ps$estimates$par) expect_is(binary.boot, "psdesign") expect_true("convergence" %in% colnames(binary.boot$bootstraps)) expect_true(nrow(binary.boot$bootstraps) == 50) pw.ve <- calc_risk(binary.boot, n.samps = 100, CI.type = "pointwise") band.ve <- calc_risk(binary.boot, n.samps = 100, CI.type = "band") expect_true("Y.boot.se" %in% colnames(band.ve)) expect_true("Y.boot.se" %in% colnames(pw.ve)) smary <- summary(binary.boot) expect_equal(names(smary), c("print", "TE.estimates", "VE.estimates")) expect_equal(names(smary$print), c("wem.test", "boot.table")) expect_less_than(smary$print$wem.test$p.value, 1) expect_more_than(smary$print$wem.test$p.value, 0) expect_true(smary$print$boot.table$conv[1] == 50) expect_true(length(smary$TE.estimates) == 3) })