* using log directory 'd:/RCompile/CRANincoming/R-devel/psborrow2.Rcheck' * using R version 4.4.0 alpha (2024-03-31 r86238 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'psborrow2/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'psborrow2' version '0.0.3.2' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Matt Secrest ' New submission Possibly misspelled words in DESCRIPTION: Viele (30:22) covariates (38:23) Suggests or Enhances not in mainstream repositories: cmdstanr Availability using Additional_repositories specification: cmdstanr yes https://mc-stan.org/r-packages/ Package has a VignetteBuilder field but no prebuilt vignette index. The Description field contains installed from https://mc-stan.org/r-packages/. Please enclose URLs in angle brackets (<...>). * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: 'cmdstanr' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'psborrow2' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in 'vignettes' ... WARNING Files in the 'vignettes' directory but no files in 'inst/doc': 'data_list.jpg' 'data_simulation.Rmd' 'dataset.Rmd' 'figure-data_simulation-unnamed-chunk-6-1.png' 'figure-dataset-mcmc-hist-1.png' 'figure-dataset-mcmc-trace-1.png' 'figure-prior_distributions-unnamed-chunk-3-1.png' 'figure-prior_distributions-unnamed-chunk-4-1.png' 'figure-propensity_scores-balplot-1.png' 'figure-propensity_scores-loveplot-1.png' 'figure-propensity_scores-matchit_jitter-1.png' 'figure-propensity_scores-plots-1.png' 'figure-simulation_study-unnamed-chunk-23-1.png' 'figure-simulation_study-unnamed-chunk-24-1.png' 'figure-simulation_study-unnamed-chunk-25-1.png' 'figure-weighting-exp_plot-1.png' 'figure-weighting-logistic_plot-1.png' 'prior_distributions.Rmd' 'propensity_scores.Rmd' 'psborrow2.Rmd' 'references.bib' 'simulation_study.Rmd' 'weighting.Rmd' * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [11s] OK Running 'testthat.R' [11s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... WARNING Directory 'inst/doc' does not exist. Package vignettes without corresponding single PDF/HTML: 'data_simulation.Rmd' 'dataset.Rmd' 'prior_distributions.Rmd' 'propensity_scores.Rmd' 'psborrow2.Rmd' 'simulation_study.Rmd' 'weighting.Rmd' * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [17s] OK * checking HTML version of manual ... [20s] OK * DONE Status: 2 WARNINGs, 2 NOTEs