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Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(proteus) > > test_check("proteus") OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). block 1 581 sequence for training 561 sequence for testing epoch: 1 Train loss: 77.17459 Test loss: 77.52828 epoch: 2 Train loss: 59.73705 Test loss: 66.44626 epoch: 3 Train loss: 52.88812 Test loss: 67.72326 block 2 1142 sequence for training 561 sequence for testing epoch: 1 Train loss: 91.84063 Test loss: 95.17114 epoch: 2 Train loss: 84.69518 Test loss: 92.97886 epoch: 3 Train loss: 82.80902 Test loss: 92.55563 final training on all 3 1703 sequence for training OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). epoch: 1 Train loss: 83.06054 epoch: 2 Train loss: 71.7547 epoch: 3 Train loss: 71.27546 variational model based on normal latent distribution with 144 tensors and 8190 parameters proteus: 118.16 sec elapsed date and value gaps filled with kalman imputation OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). block 1 801 sequence for training 801 sequence for testing epoch: 1 Train loss: 227.9594 Test loss: 203.5346 epoch: 2 Train loss: 164.2419 Test loss: 187.0067 epoch: 3 Train loss: 160.4958 Test loss: 189.6525 block 2 1602 sequence for training 801 sequence for testing epoch: 1 Train loss: 202.8217 Test loss: 232.4142 epoch: 2 Train loss: 169.5247 Test loss: 232.6775 epoch: 3 Train loss: 165.5183 Test loss: 231.5108 final training on all 3 2403 sequence for training epoch: 1 Train loss: 179.6252 epoch: 2 Train loss: 155.8336 epoch: 3 Train loss: 154.886 variational model based on normal latent distribution with 144 tensors and 60670 parameters proteus: 199.36 sec elapsed OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). block 1 136 sequence for training 136 sequence for testing epoch: 1 Train loss: 182.8902 Test loss: 183.4576 epoch: 2 Train loss: 164.7527 Test loss: 180.9773 epoch: 3 Train loss: 169.5123 Test loss: 189.8327 block 2 272 sequence for training 136 sequence for testing epoch: 1 Train loss: 191.4464 Test loss: 191.673 epoch: 2 Train loss: 174.2253 Test loss: 199.3528 epoch: 3 Train loss: 172.3368 Test loss: 192.6812 block 3 408 sequence for training 136 sequence for testing epoch: 1 Train loss: 145.7213 Test loss: 107.7565 epoch: 2 Train loss: 107.3647 Test loss: 106.8968 epoch: 3 Train loss: 107.7502 Test loss: 104.2013 final training on all 4 544 sequence for training epoch: 1 Train loss: 185.388 epoch: 2 Train loss: 178.3816 epoch: 3 Train loss: 179.2917 variational model based on laplace latent distribution with 48 tensors and 17794 parameters proteus: 60.22 sec elapsed OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). block 1 397 sequence for training 397 sequence for testing epoch: 1 Train loss: 252.4633 Test loss: 254.313 epoch: 2 Train loss: 242.9617 Test loss: 253.8075 epoch: 3 Train loss: 246.1759 Test loss: 264.2495 block 2 794 sequence for training 397 sequence for testing epoch: 1 Train loss: 292.9565 Test loss: 283.5365 epoch: 2 Train loss: 290.5715 Test loss: 284.4531 epoch: 3 Train loss: 291.8103 Test loss: 282.2577 block 3 1191 sequence for training 397 sequence for testing epoch: 1 Train loss: 271.6637 Test loss: 272.5229 epoch: 2 Train loss: 267.4035 Test loss: 272.111 epoch: 3 Train loss: 269.6988 Test loss: 275.1079 final training on all 4 1588 sequence for training epoch: 1 Train loss: 297.5815 epoch: 2 Train loss: 294.8799 epoch: 3 Train loss: 298.6073 variational model based on normal latent distribution with 32 tensors and 10402 parameters proteus: 112.07 sec elapsed OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). OMP: Warning #96: Cannot form a team with 48 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). block 1 134 sequence for training 134 sequence for testing epoch: 1 Train loss: 207.4779 Test loss: 212.6421 epoch: 2 Train loss: 199.5807 Test loss: 206.991 epoch: 3 Train loss: 198.2751 Test loss: 210.4303 block 2 268 sequence for training 134 sequence for testing epoch: 1 Train loss: 228.6038 Test loss: 225.1906 epoch: 2 Train loss: 234.974 Test loss: 212.0722 epoch: 3 Train loss: 226.9319 Test loss: 218.1356 block 3 402 sequence for training 134 sequence for testing epoch: 1 Train loss: 174.8428 Test loss: 168.7419 epoch: 2 Train loss: 174.7587 Test loss: 160.4472 epoch: 3 Train loss: 170.3019 Test loss: 162.0961 final training on all 4 536 sequence for training epoch: 1 Train loss: 188.2629 epoch: 2 Train loss: 227.6444 epoch: 3 Train loss: 237.7569 variational model based on cauchy latent distribution with 112 tensors and 47360 parameters proteus: 81.19 sec elapsed random search: 253.53 sec elapsed [ FAIL 0 | WARN 0 | SKIP 0 | PASS 34 ] Warning messages: 1: closing unused connection 6 (<-CRANwin3.fb05.statistik.uni-dortmund.de:34645) 2: closing unused connection 5 (<-CRANwin3.fb05.statistik.uni-dortmund.de:34645) > > proc.time() user system elapsed 556.37 43.21 577.03