* using log directory 'd:/RCompile/CRANincoming/R-devel/proteomicsCV.Rcheck'
* using R Under development (unstable) (2024-11-20 r87352 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'proteomicsCV/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'proteomicsCV' version '0.4.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [22s] NOTE
Maintainer: 'Alejandro Brenes <abrenes@ed.ac.uk>'

The Description field contains
  https://www.biorxiv.org/content/10.1101/2024.09.11.612398v1
Please enclose URLs in angle brackets (<...>).
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'proteomicsCV' can be installed ... WARNING
Found the following significant warnings:
  Warning: D:/temp/2024_11_21_19_20_02_5177/RtmpI7XMVr/R.INSTALL69d0505d2498/proteomicsCV/man/proteomicsCV.Rd:41: unexpected '{'
  Warning: D:/temp/2024_11_21_19_20_02_5177/RtmpI7XMVr/R.INSTALL69d0505d2498/proteomicsCV/man/proteomicsCV.Rd:44: unexpected '}'
  Warning: proteomicsCV.Rd:41: All text must be in a section
  Warning: proteomicsCV.Rd:43: All text must be in a section
See 'd:/RCompile/CRANincoming/R-devel/proteomicsCV.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... WARNING
prepare_Rd: ./man/proteomicsCV.Rd:41: unexpected '{'
prepare_Rd: ./man/proteomicsCV.Rd:44: unexpected '}'
prepare_Rd: proteomicsCV.Rd:41: All text must be in a section
prepare_Rd: proteomicsCV.Rd:43: All text must be in a section
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 2 WARNINGs, 2 NOTEs