* using log directory ‘/srv/hornik/tmp/CRAN_pretest/prabclus.Rcheck’ * using R Under development (unstable) (2024-09-23 r87189) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘prabclus/DESCRIPTION’ ... OK * this is package ‘prabclus’ version ‘2.3-4’ * checking CRAN incoming feasibility ... [4s/6s] INFO Maintainer: ‘Christian Hennig ’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘prabclus’ can be installed ... [3s/3s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [7s/7s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [4s/4s] OK * checking differences from ‘prabclus-Ex.Rout’ to ‘prabclus-Ex.Rout.save’ ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [7s/7s] NOTE Running ‘donttestexamples.R’ [1s/1s] Running ‘prabclustests.R’ [6s/6s] Comparing ‘prabclustests.Rout’ to ‘prabclustests.Rout.save’ ...106,109c106 < Linking to GEOS 3.13.0, GDAL 3.9.2, PROJ 9.4.1; sf_use_s2() is TRUE < WARNING: different compile-time and runtime versions for GEOS found: < Linked against: 3.13.0-CAPI-1.19.0 compiled against: 3.12.2-CAPI-1.18.2 < It is probably a good idea to reinstall sf (and maybe lwgeom too) --- > Linking to GEOS 3.10.2, GDAL 3.4.3, PROJ 8.2.0; sf_use_s2() is TRUE * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [2s/2s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE