* using log directory ‘/srv/hornik/tmp/CRAN_pretest/ppsbm.Rcheck’ * using R Under development (unstable) (2025-01-13 r87564) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.6 (1+b1) Debian flang-new version 19.1.6 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘ppsbm/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘ppsbm’ version ‘1.0.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/4s] NOTE Maintainer: ‘Daphné Giorgi ’ Found the following \keyword or \concept entries which likely give several index terms: File ‘tauDown_Q.Rd’: \keyword{Dmax,} \keyword{n,} \keyword{statistics(generated_Q3$data,} \keyword{tauDown_Q(tau[[1]],1)} \keyword{tauInitial(data,n,Q,d_part,n_perturb,perc [TRUNCATED] File ‘tauInitial.Rd’: \keyword{Dmax,} \keyword{n,} \keyword{statistics(generated_Q3$data,} \keyword{tauInitial(data,n,Q,d_part,n_perturb,perc [TRUNCATED] File ‘tauKmeansSbm.Rd’: \keyword{statistics(generated_Q3$data,n,Dmax,direc [TRUNCATED] \keyword{tauKmeansSbm(Nijk,n,Q,FALSE)} File ‘tauUp_Q.Rd’: \keyword{Dmax,} \keyword{n,} \keyword{statistics(generated_Q3$data,} \keyword{tauInitial(data,n,Q,d_part,n_perturb,perc [TRUNCATED] \keyword{tauUp_Q(tau[[1]],1)} File ‘taurhoInitial.Rd’: \keyword{Dmax,} \keyword{n,} \keyword{statistics(generated_Q3$data,} \keyword{tauInitial(data,n,Q,d_part,n_perturb,perc [TRUNCATED] \keyword{taurhoInitial(tau[[1]],data,n,Q,directed= [TRUNCATED] * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘ppsbm’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... NOTE Author field differs from that derived from Authors@R Author: ‘D. Giorgi, C. Matias, T. Rebafka, F. Villers’ Authors@R: ‘Daphné Giorgi [aut, cre], Catherine Matias [aut], Tabea Rebafka [aut], Fanny Villers [aut]’ * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s/4s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [3s/3s] OK * checking PDF version of manual ... [4s/4s] WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! Undefined control sequence. Qmin\le Q \le \Qmax l.1154 ...ters Q, with \eqn{Qmin\le Q \le \Qmax}{} and is a list of 8 elements: * checking PDF version of manual without index ... ERROR * checking HTML version of manual ... [1s/1s] NOTE Found the following math rendering problems: mainVEM.Rd:97: Undefined control sequence: \Qmax in Qmin\le Q \le \Qmax * checking for non-standard things in the check directory ... NOTE Found the following files/directories: ‘ppsbm-manual.tex’ * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING, 4 NOTEs