R Under development (unstable) (2024-05-16 r86559 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(pmartR) > > test_check("pmartR") [ FAIL 0 | WARN 1 | SKIP 11 | PASS 2378 ] ══ Skipped tests (11) ══════════════════════════════════════════════════════════ • On CRAN (11): 'test_as_trelliData.R:4:3', 'test_as_trelliData.R:361:3', 'test_as_trelliData_edata.R:4:3', 'test_as_trelliData_summary.R:4:3', 'test_diffexp_seq.R:4:3', 'test_imd_anova.R:5:3', 'test_imd_anova_paired.R:5:3', 'test_plots.R:14:3', 'test_trelliPlots.R:4:3', 'test_trelliPlots_seqData.R:4:3', 'test_trelli_pvalue_filter.R:4:3' [ FAIL 0 | WARN 1 | SKIP 11 | PASS 2378 ] Deleting unused snapshots: • plots/plot-corres.svg • plots/plot-cvfilt-log-scale.svg • plots/plot-cvfilt.svg • plots/plot-datares-bw-theme.svg • plots/plot-datares-palette.svg • plots/plot-datares.svg • plots/plot-dimres.svg • plots/plot-imdanovafilt.svg • plots/plot-isobaricnormres-bw-theme.svg • plots/plot-isobaricnormres-global-normalized.svg • plots/plot-isobaricnormres-palette.svg • plots/plot-isobaricnormres.svg • plots/plot-isobaricpepdata.svg • plots/plot-lipiddata.svg • plots/plot-metabdata.svg • plots/plot-moleculefilt-cumulative.svg • plots/plot-moleculefilt.svg • plots/plot-nares-bar-group-color.svg • plots/plot-nares-bar-group-order.svg • plots/plot-nares-scatter.svg • plots/plot-nmrdata.svg • plots/plot-nmrnormres-2.svg • plots/plot-nmrnormres-color-by.svg • plots/plot-nmrnormres.svg • plots/plot-normres.svg • plots/plot-pepdata.svg • plots/plot-prodata.svg • plots/plot-proteomicsfilt-redundancy.svg • plots/plot-proteomicsfilt.svg • plots/plot-rmdfilt.svg • plots/plot-rnafilt.svg • plots/plot-seqdata.svg • plots/plot-spansres-bw-theme.svg • plots/plot-spansres-color-high-color-low.svg • plots/plot-spansres.svg • plots/plot-statres-anova-volcano.svg • plots/plot-statres-anova.svg • plots/plot-statres-combined-volcano.svg • plots/plot-statres-combined.svg • plots/plot-statres-gtest.svg • plots/plot-totalcountfilt.svg > > proc.time() user system elapsed 37.42 2.06 39.48